Poecilia mexicana (shortfin molly): 106915134
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Entry
106915134 CDS
T08022
Symbol
ercc6
Name
(RefSeq) DNA excision repair protein ERCC-6
KO
K10841
DNA excision repair protein ERCC-6
Organism
pmei
Poecilia mexicana (shortfin molly)
Pathway
pmei03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
pmei00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
106915134 (ercc6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pmei03036
]
106915134 (ercc6)
03400 DNA repair and recombination proteins [BR:
pmei03400
]
106915134 (ercc6)
Chromosome and associated proteins [BR:
pmei03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
106915134 (ercc6)
DNA repair and recombination proteins [BR:
pmei03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
Other TCR factor
106915134 (ercc6)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
WHD_Rad26_CSB
DegQ
Spt5-NGN
Motif
Other DBs
NCBI-GeneID:
106915134
NCBI-ProteinID:
XP_014838020
Ensembl:
ENSPMEG00000005496
UniProt:
A0A3B3WNI8
LinkDB
All DBs
Position
Unknown
AA seq
1446 aa
AA seq
DB search
MPVEAAEPQASSSFSSPVSAALTPGGLEEDGSARGSALCTFPENGHGSEAAAAYPANTGP
GEGNSAGKRSGTLLQIDRQRIQVASASSGADELQGLGVFVYDQDVLEQGVLQQVDEAIHE
ASQAAAKAEAEKEYQSVLDDVRSVTASLKHINKIIEQLSPYAASSKDISRKIESVKRQKE
NKEKQLKKVRAKQKRLQAILGGEDIQRVEAELLAEDDGEEESGPSTLGSMLMPAQETEWE
ELIRKGHMTPFGTRIPQKEVKKEPRKLMLAENSAFDQYLADQAKLATERKKVPLLKKKKS
SALHVYERTKTGKNVSSSKDNKLKKRMRKLQINALKTHSKARPKTEPKLPKPRRKRHTEG
EQTDSEGSEYLPSDEGLDLDQEEREAMEEGFWDGNEDDEYELKLYKKKTVGTGRKKMKKN
DSEDEYSPESSDDDDGDNNRGRSKKHKDDGDVDYYRQRIRKWKRQRIREREEKRERGEEL
TDDSDAEFDEGFKVPGFLWKKLYKYQQTGVRWMWELHCQQAGGILGDEMGLGKTIQVISF
LAGLSYSKLRTRGSNYRYVGLGPTVIVCPATVMHQWVKEFHTWWPPFRVAVLHETGSFTS
NKEKLIPEIAACHGILITSYSAVRNLQDILQRYDWHYVILDEGHKIRNPNAGVTVACKQF
RTPHRFILSGSPMQNNLKELWSLFDFVFPGKLGTLPVFMEQFSVPITMGGYSNASPVQVQ
TAFKCACVLRDTINPYLLRRMKDDVKANLSLPDKNEQVLFCRLTEEQRQVYQSFLDSKEV
YQILNGDMQVFSGLIALRKICNHPDLFSGGPRILRGIPEDQLTEEEHFGFWKRSGKLMVV
ESLLRLWFKQGQRVLLFTQSRQMLDILEVFVREKDYSYLKMDGTTAIASRQPLIARYNED
KSIFIFLLTTKVGGLGVNLTGANRVIIYDPDWNPSTDTQARERAWRIGQKQQVTIYRLLT
AGTIEEKIYHRQIFKQFLTNRVLKDPKQRRFFKSNDIYELFTLADPDGTQGTETSAIFAG
TGSDVKVPKKPDRLKSSPFINGVSHDYRRSPGKQRESGAENRNSLSLGHSSISPSSGNSQ
GKSNTPTDSRSANQNAKDIEMSNTPNMLLIRDGNDSGLVERANRSPTSTSCHQHRDKDRG
KHREKRKHCDSTGTDKRRHKRRKHSRDARFEGHRISHLVKKRTFNKQENEETSTEDQKKS
DDYVLAKLFRKSGIHSVMQHDSIMESSNPDYVLVEAEANRVAKDALKALKISRQQCRLPY
NRPPPPPTKKRFGQKKNSLLVTSSAQPVATSVKCKDAAVVKKSISKKPTAGAHFSGEGGD
DDSNSALLSSASLLAKMKARNHIAMPSSQGAAAAEEEEENGPGAPATSSPPAPPTEHDEL
LVDLRNFVAFQASVDGEATTQEVLEYFKPRLTQKQAPVFRELLRSICDFHRTSGQEGIWR
LKENFR
NT seq
4341 nt
NT seq
+upstream
nt +downstream
nt
atgcctgtagaagctgcagagccccaggcgtcctcctccttctccagcccggttagtgct
gctctcactccaggaggcttggaggaggatggatctgcaagaggttctgcactctgtact
ttccctgagaacggtcatggttctgaggcagctgcagcctaccctgccaacactggaccc
ggggaaggtaacagtgctggcaagcggtcagggaccttgctgcagatcgaccgtcagcgc
atccaagtggcatctgccagctccggagcagatgagctgcaaggccttggtgtgtttgtg
tatgatcaggatgtcctcgagcaaggtgttctgcagcaagtggatgaggcgatccatgaa
gcgagtcaggccgcggcgaaagctgaggctgagaaggagtaccagtctgtgctagatgac
gtccggtctgttacagcatctttaaaacacatcaacaagattattgagcagctgtctccc
tatgcagcctccagcaaggatatcagcaggaaaattgagtctgtgaaacgacagaaagaa
aataaggagaaacagctgaaaaaagtaagagcgaaacagaagcggcttcaggccatactg
ggaggagaggacattcagagagtggaagctgagctgttggcagaagatgatggagaagaa
gaatctggaccatccacgctgggcagcatgctcatgccggcacaggagaccgaatgggag
gaactcatccggaaaggtcacatgactcctttcggcaccagaatcccacaaaaggaggta
aagaaggagcctcggaaactgatgctggctgagaactcagcgtttgaccagtacctggcg
gaccaggccaagttggccacagagcggaagaaggtacctcttcttaagaagaagaaaagt
tctgcactccacgtttatgagaggaccaaaacaggaaaaaatgtttcctcatccaaggac
aacaaactgaagaagcgcatgcgaaagctgcagataaatgctttgaaaacccattcaaag
gctcgacccaagactgagccaaagcttcctaagcctcggaggaaacggcacacagaggga
gagcagacagacagcgaggggtcagagtacctgcccagtgatgagggactggacttggac
caggaggagagggaagccatggaggagggcttttgggatggcaatgaggatgatgagtat
gaactaaaactgtacaagaagaaaactgtggggacaggaaggaagaaaatgaagaaaaac
gacagtgaggacgaatactcccctgagagttcagacgacgacgacggcgacaataaccgg
ggtagatcaaaaaaacataaagacgacggggatgtggactactacaggcagcgaataagg
aaatggaagcgacagcggattcgagaacgagaggagaagcgagaaagaggggaggagctt
acagacgacagtgacgcagagtttgacgaaggcttcaaagttcccggtttcctctggaaa
aaactctacaagtaccagcagaccggtgtgcggtggatgtgggaactccactgtcagcag
gcaggaggcatcctgggagacgagatgggattgggcaaaaccatccaggtcatcagcttt
ctggcaggactaagctacagtaaactgaggactagagggtccaactacagatacgtcggt
ttaggtccaacggtgattgtgtgcccggccactgtgatgcaccagtgggtgaaggagttc
cacacctggtggcctcctttcagagtggcggtcctgcacgaaaccggctctttcaccagc
aacaaggaaaagttgattccagagatagcagcgtgtcatggcatcctgatcacatcgtat
tcagctgtgagaaatttgcaagacattttacagcgctacgactggcactatgttatactg
gatgagggccacaagatcaggaacccaaatgctggcgtcaccgtcgcctgcaaacagttt
cgcactcctcacagattcatcctgtccggctcgccgatgcagaacaacttgaaggagctg
tggtctctgtttgacttcgtcttccctggcaaactagggacgcttcctgtcttcatggag
cagttttctgtgccaataaccatgggaggatacagcaacgcgtcacctgtccaggtccag
acggcgttcaagtgtgcatgtgtgttgagggacacaataaatccttacctgctcaggaga
atgaaggacgacgtcaaggccaacctctccttgcctgacaaaaacgaacaggtgctgttc
tgcagattaacagaggagcagcggcaggtttatcaaagcttcttagattccaaagaagtc
taccaaatactaaatggtgacatgcaggttttctcgggtttgattgcactgcgtaagatc
tgcaaccacccggaccttttctccggcgggccccgaatcctgaggggaatcccagaggac
cagctgaccgaggaggaacactttggcttctggaagcgctcgggcaagctgatggtggtt
gagtcgctgctgcgcctctggttcaagcagggccagcgggtcctgctcttcactcagtcc
agacagatgctggacatcttggaggtgtttgtgagggagaaggactactcgtacctgaaa
atggacggcacgaccgcgattgcttcccgacagccgctcattgctcgctacaacgaggac
aaatccatttttatcttcctgctgaccactaaagttggtggtctgggagtcaatctgact
ggagccaacagagttatcatttatgacccagactggaaccccagcaccgacacacaggct
cgagagcgagcgtggaggataggtcaaaagcagcaggtaacaatctacaggctgctgact
gcagggaccattgaagagaaaatctaccacaggcaaatcttcaagcaatttctcaccaat
cgcgttctgaaggatcccaaacaaagacggttcttcaagtctaatgacatctacgagctt
tttactttggctgatcccgacggaacgcagggaacagagaccagtgccatattcgcaggc
actggatccgacgtcaaagtacccaagaaacctgacaggttaaagtcctcgcccttcatc
aacggcgtcagccatgattatagacggtctccaggaaaacagagagaatccggtgcagag
aacagaaactcgttatcattaggacactccagcatatctccatccagtggaaactctcag
ggtaaatcaaacacgccaacggacagtcggagcgcaaaccagaatgcaaaagatatagag
atgagcaatactccaaatatgcttcttataagagatggtaacgattcgggtttagttgag
agagcaaacagaagcccgacctcgaccagctgccaccagcacagagacaaagacagagga
aagcacagggagaagagaaagcactgcgactccacgggtacggacaaacgcaggcataaa
agacggaagcactccagggacgctcggttcgaaggtcaccgcatctctcatctggtgaag
aaacgcacttttaataaacaagaaaacgaagagacttcgacagaagaccagaagaaatcc
gacgattacgtcttggcaaagctcttcaggaaatccggtatccacagtgtgatgcaacat
gacagcatcatggagtcatccaacccggactatgttcttgtggaagcagaagccaacagg
gtggctaaagatgcactcaaagcccttaagatttctcggcagcagtgcagactgccttat
aacagacctcctcccccgcctactaagaaacgttttggacaaaagaagaattcgctctta
gtcacgtcgtctgctcagcctgtcgccacttctgttaaatgcaaggatgctgctgttgtg
aagaagtctatctcaaagaagccaactgcaggagctcattttagtggggaaggaggagat
gatgattcaaactcagccctgctgtcgtccgcatctctgctggccaagatgaaagctcga
aaccatatcgctatgccttcctcccagggagcagcagcagcagaggaagaggaggagaac
ggccccggagctccagcaacaagctctcctcctgctccccccactgagcacgacgagctg
ctggtggatctgcgcaactttgtggccttccaggcgagtgtggacggcgaggccaccacg
caggaggtgctggagtatttcaaacccagactgacccagaaacaggcgcccgtcttcaga
gagctgctcaggagcatctgtgactttcaccggacctctggtcaggagggcatctggagg
ctgaaggagaacttccgctga
DBGET
integrated database retrieval system
