Poecilia mexicana (shortfin molly): 106915222
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Entry
106915222 CDS
T08022
Symbol
ciita
Name
(RefSeq) MHC class II transactivator isoform X1
KO
K08060
MHC class II transactivator [EC:
2.7.11.1
]
Organism
pmei
Poecilia mexicana (shortfin molly)
Brite
KEGG Orthology (KO) [BR:
pmei00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
pmei01001
]
106915222 (ciita)
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
pmei04054
]
106915222 (ciita)
Enzymes [BR:
pmei01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
106915222 (ciita)
Protein kinases [BR:
pmei01001
]
Serine/threonine kinases: Other
TAF1 family
106915222 (ciita)
Pattern recognition receptors [BR:
pmei04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
106915222 (ciita)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NACHT
LRR_6
LRR_4
LRR_14
nSTAND3
RsgA_GTPase
AAA_22
Motif
Other DBs
NCBI-GeneID:
106915222
NCBI-ProteinID:
XP_014838162
Ensembl:
ENSPMEG00000002515
UniProt:
A0A3B3WFW7
LinkDB
All DBs
Position
Unknown
AA seq
1648 aa
AA seq
DB search
MAQFAEVLNQVRSVLTVALPGEVHALLEGLVEEGIISEAYRNSLNLHWLNDGIVPKFTSK
PGCVELDEDLNSPGSVAQLDLNQEPMSRVRTSGSKSLAGDHNVEQTELVSLIEEPNSTRF
TLEKNKWLQHEILQRNQEEMQDLLEEVLMDMSYFNQDPLSYDCTLRSSDEKAELLSGARS
EPPSDNESINMGNEESEEVWLQQLEESARRIAVPLWQNWDRGRGMLQTLLPCGPSGCSIS
DRMMLEGEAQSVVLDMEEEMELAAACSSLDTCVGDFECEELSFACDTDAGKSEREGLHFS
TLSGVAVFNADDFRILGATRNASPVEACEATEAGYITQILEGQFDVLCPVGKTSDKVDDL
VCFTPDAPYQQCGTQSGLSEATFRDLLHSDVPEDSRTVLQNASQYSLAEGFTDYLEDAEM
YNQDGEFQEKTDLHCDAKMQENDQDSSGLLDLGHIADHCWDDEYLLSQIFSFSNLLFSQD
LGPDCLDEITRNSDTPVALEASDTANHNEQREQWKSSGKIKPKRKRQRDALSTQCTNGDS
RVKRQKTTEPPKTQEETAEPPAIHDAEAVSVPAESVGCLPTTPPGNLLMFPPQSANSIPI
QFITIPDPSAYKVVQLSSSPPPLIRLPLPNTAATPTYIFVPNPSPTRKRQVPPLSPADGA
VAPFLMSSIQPGSMSDTASKVTTPPAAPPSPTNEVSPCKESPKSPVVVEIPQAVKDYIQQ
LKIHMSQVCQDMEAGLRMNAHYVNVSVSQREIARAGKNTNRCLDKELIITGDIDRQKNSM
GQSQIFDSLNGKRYNVLFGNAGMGKTTVIKKLCLDWSIDCIPQFDFVFLLDGKQLALTEP
VHSLQTLLLSQSSFAPHCADPDGVYAQILAAPKRVLIVFDGFDELRHYEVLLQTQKKELV
ASLQKDSKAQAFTMKQLFSSILQRVLLPGCTLLLATRPRGTASQLLRRADSFLEVCGFTP
ANVETYVSQYFSDPGLRESALDFLKSSSYLNLLCWNPALCHLVCAALEQCKSEAALPRTL
TALCHKVLCLKMEKDRGSTESLPEADKMNTVEPMENTDISSNSQGRRVQKNNRTRPRAVA
CAASGNQRARRTKGQKKLDEENVCEDTIRSELLSQLCSIAWEGVKSNSSVVPKGRTVSTQ
LRAFSLRTGLLLSQSLMRRTLSKGEETEGGGQVNKGIEEVEKEENREKGGNPQTSDECED
GILLWANPFLQSYMAAVHLSLSRSVTDHSFLQTLPFQMGAKGRRKPQREEMELTQRIAAG
LLFHNRTELQSLHSYSETVFRDMVASKQALVMKHLEGLCFGDLSSAQILEACNYVYEASF
THQESGTDTSAKMLTHLASNLPELLTFRGVPLNPPDVFTVQNALRAGGAEGRSFCLDLED
SGIQICGLRTLVALSNINTYRACIADVVTLWEELEKRSDEGLLQEAVSKFKIHPLKATQV
CHIEHLERLVSIHTSKRLSDSSDQSNSLLAEGVPAVKELYKLEFELDPENSPLALPKLWD
LLPGLHNLQHLDVENSKIGDKGAEKLANALVSLHSLEVLNLSENCIGDQGVKKLALALKD
LPKLHCLSLYSNVISDEGAESLAAVLPHMASLTDLDIKYNKMTDIGAQSLGASLRKCSKV
KTLRMWNQCIPYGVFERLKQQDSRILWQ
NT seq
4947 nt
NT seq
+upstream
nt +downstream
nt
atggctcagttcgccgaggtcctgaaccaggtgaggtcggtcctcaccgtggcgctgccc
ggtgaggttcacgctctgctggagggtctggtggaagaggggatcatctcggaggcatac
aggaacagtttgaatctgcactggctcaatgatggcattgtgcctaaattcacgagcaaa
ccaggatgcgtcgagctggatgaggacttaaactctccaggatccgtggctcagttggac
ctcaaccaagaaccgatgagccgagtgagaacaagcggatcgaaatctctcgctggtgac
cacaatgtggaacaaacagaattggtctcattaatagaggaaccaaacagcacaagattt
accctggagaagaacaagtggctccaacatgaaattctgcagcgaaatcaggaggaaatg
caggatttattggaagaagttctaatggacatgtcctacttcaaccaagaccctctttcc
tatgactgcactctcagatccagtgatgaaaaagcagaactgctgagcggtgcaaggagt
gagcctcctagtgataatgaaagcataaacatggggaatgaggaaagtgaggaggtgtgg
ttacagcagctagaggagtcagccaggaggatagctgttcctctgtggcagaactgggac
agagggagagggatgttgcagaccctgctgccctgtgggccaagcggctgctcaataagc
gacaggatgatgctggagggtgaagcccagagtgtcgttttggacatggaggaggaaatg
gagcttgcagccgcttgcagttcacttgacacctgcgttggcgactttgagtgtgaagag
ctgagctttgcgtgtgacacagatgcaggcaagtcagaacgagaagggcttcacttctct
accctcagcggggttgctgtgttcaacgcggacgacttcaggatccttggagcgacaaga
aacgcctcacctgttgaagcctgcgaagcaacagaggcgggatacatcacccaaatactg
gagggccaattcgacgttctgtgtccagttggcaagacttcagacaaagtggatgacctg
gtctgtttcacaccagatgcaccatatcaacaatgtggaacacagtcaggactgtctgaa
gccactttcagggacctgctccattcagatgtgcctgaagacagcagaactgttctgcaa
aatgcctctcagtatagtctcgcagaaggatttacagattacctagaagatgcagaaatg
tataaccaagatggagaattccaagaaaagacggatttacattgtgatgccaagatgcaa
gaaaacgaccaggattcctcgggcctgttggatttgggtcatatagcggaccattgctgg
gatgatgaatatttactttctcaaatcttcagtttctcaaatctgctcttcagtcaagat
ctggggcctgactgccttgatgaaatcacccgaaacagtgacactcctgtggcactggag
gcctctgataccgctaaccacaacgagcagagagagcagtggaagtcatcgggcaaaata
aagcctaagagaaaaagacagagagatgctctgtccacgcagtgcaccaatggagactcc
agagtgaaaaggcaaaaaacaacagaaccaccaaaaacccaggaagaaactgctgagcca
cctgccattcatgatgccgaagcagtgtcagttccagcagagtctgtgggatgccttccc
accactcctccgggcaacctgctcatgttcccgcctcagtcagctaattccattcccatt
cagttcatcacaatcccagacccctctgcttataaagtggtccagctatcctcctcccct
cctccgcttattaggctcccgctcccgaacacggctgctacgccaacgtacatcttcgtt
cctaatccctctccgacccgcaaacgccaggttccacccctctctccagcggacggtgca
gtggcgcccttcctgatgagttcaatccagccaggttccatgtcggacacagccagcaaa
gtcacgaccccccctgcagctcctccgtcccccacaaacgaggtatccccatgtaaggag
tcgccaaagtcccctgtggttgtggaaatcccccaggctgtgaaggactacatccagcaa
ttaaaaatacacatgagtcaggtctgccaggatatggaggcaggcctgaggatgaacgcc
cattacgtgaacgtgagtgtgagccagagagagatcgctcgcgctgggaaaaacacgaac
agatgtctggacaaggagctcatcataactggagacatagaccgccagaagaactccatg
ggacagagtcagatctttgacagcctgaatgggaaacgctacaacgtgctgtttggcaat
gctggcatggggaaaacaaccgtgatcaagaagctgtgtctcgactggtccatagactgc
atcccccagtttgactttgtcttcctattagacggcaaacagctcgctttaacggagccc
gtccacagcctccagacgctgctgctcagtcagtcctccttcgctccacactgcgcggac
cctgatggggtttacgctcagatcctcgcagctcctaaacgggtgcttatcgttttcgat
gggtttgacgagctgcggcactacgaagtcctgctccagactcagaagaaggagttggta
gcctcgctgcaaaaagacagcaaagcccaggccttcacgatgaagcagctgttctccagc
atccttcagagggtcctgcttccgggctgcacgctcctcctcgccacccgcccgagaggc
acggccagccagttgctccggcgcgcggacagctttctggaggtctgcggcttcactcca
gcgaacgtggagacgtacgtctcccaatacttctccgatcctggacttagggaatctgct
ttggacttcttaaaaagcagcagctacctgaacctcctctgctggaacccggctctctgc
cacttggtgtgcgcagctttggaacagtgcaaaagcgaggctgccttaccaagaacatta
actgcactctgtcacaaggtgctctgcttgaaaatggaaaaagacagaggaagcacagag
tcacttcctgaggccgataaaatgaacacagttgaacccatggaaaatacagacatttct
agcaattctcaggggaggagagtacagaaaaataatcgcacaaggcccagagcggtagct
tgcgctgcttctggtaaccaaagagcaaggaggacgaagggacagaagaaactggatgag
gagaacgtgtgcgaggacaccatcagatcagagctgctgtcccagctttgctctatagcc
tgggagggggtgaaatccaactcatctgttgttcccaaaggacgaactgtctccacccaa
ctcagagccttcagcttgaggacgggcctgctgctttctcagtccctcatgagaaggacg
ctttccaaaggagaggagacggagggaggaggacaagttaacaaagggatagaagaagta
gagaaggaagagaacagagaaaagggaggaaacccacaaacgtctgatgaatgtgaagat
gggatcctgttgtgggctaatcctttccttcagagttacatggctgctgtccatttgtct
ttgtcaaggtctgtgacagaccactcctttctccagaccttgcctttccagatgggagcc
aaaggccgacggaaaccacagagggaggagatggagctgacgcagcggatcgccgcaggc
ctcctgttccacaacaggacagagctacagagtcttcattcatactcggaaacggtcttc
agggacatggttgccagtaagcaggctttggtgatgaaacacctggaaggtctgtgcttt
ggggatttgagttcagctcagatcctggaggcgtgcaactacgtctacgaagcaagtttc
acgcaccaagagagcgggacggacaccagtgccaaaatgctgacccatctggcatcaaat
ctccctgaactcctaacatttcggggcgttcccctcaacccgccagatgtgttcacagtg
caaaacgctctcagggcgggtggagctgaaggcaggagcttctgtttggatctggaagac
tctgggatacagatctgtggacttaggacgttagtggccctcagcaacatcaacacatac
agggcctgcatagcagacgtcgtcaccctgtgggaggagctggagaagaggagcgacgag
ggtctcctgcaagaagcggtgtccaagttcaagatccatcctctgaaagccactcaggtc
tgtcacatagagcacctggaaaggctcgtcagcatacacaccagcaagaggctctcagac
agctccgaccaatcaaattccctcctggcagaaggggtgccagcagtcaaagagctgtac
aagctggagtttgagcttgacccagaaaacagtcccttggctcttcccaaactgtgggac
cttctccccgggctccataacctgcagcacttggacgtggaaaacagtaagatcggagac
aaaggagcagagaaactggcaaatgcgttagtctctcttcactcactggaagtactgaat
ttgtccgagaactgcataggcgaccagggagtgaagaagctagccctcgccttgaaggac
ctgcccaagctgcactgtctgagtctgtacagtaacgtgatttccgacgaaggggcagag
agtttagcagctgtgctcccacacatggcttcgcttacagacctcgacattaaatataac
aagatgacggatattggagcacaaagtttgggagccagtttgagaaagtgctctaaagtt
aagactttgaggatgtggaaccagtgtatcccatatggagtttttgagagacttaagcaa
caggacagccgcatcctctggcaataa
DBGET
integrated database retrieval system
