Poecilia mexicana (shortfin molly): 106915420
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Entry
106915420 CDS
T08022
Name
(RefSeq) replication protein A 70 kDa DNA-binding subunit-like
KO
K07466
replication factor A1
Organism
pmei
Poecilia mexicana (shortfin molly)
Pathway
pmei03030
DNA replication
pmei03420
Nucleotide excision repair
pmei03430
Mismatch repair
pmei03440
Homologous recombination
pmei03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
pmei00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
106915420
03420 Nucleotide excision repair
106915420
03430 Mismatch repair
106915420
03440 Homologous recombination
106915420
03460 Fanconi anemia pathway
106915420
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pmei03000
]
106915420
03032 DNA replication proteins [BR:
pmei03032
]
106915420
03400 DNA repair and recombination proteins [BR:
pmei03400
]
106915420
Transcription factors [BR:
pmei03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
106915420
DNA replication proteins [BR:
pmei03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
106915420
DNA repair and recombination proteins [BR:
pmei03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
106915420
MMR (mismatch excision repair)
106915420
DSBR (double strand breaks repair)
HR (homologous recombination)
106915420
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac-A_C
REPA_OB_2
Rep-A_N
tRNA_anti-codon
DUF223
DUF8448
Pox_vIL-18BP
CDC24_OB3
CATSPERD-E_C
Motif
Other DBs
NCBI-GeneID:
106915420
NCBI-ProteinID:
XP_014838497
Ensembl:
ENSPMEG00000020602
UniProt:
A0A3B3XRQ7
LinkDB
All DBs
Position
Unknown
AA seq
600 aa
AA seq
DB search
MASLSTGAIEALANGSGWNEAVLQLVNIRKIDGGSGPSRFRVMMSDGRHTLSSFMLSTQL
NYMAEENLLVPNCVCVLKRQVTNMLKDGRRVVIILEIDVIKPADASGKIGDPVPYSDGQS
RGPQPAPVPESRPPLQPQNRNEAVVRNLKRDFAKKIPSALPDTPGGSSKIVPIASLNPYQ
SKWTIRARVTNKSSIRTWSNARGEGKLFSMEIVDESGEIRVTGFNQEVDKFFSLIEVGKV
YYISKGSLKIANKQYTSVKNDYEMTLNGESTVIPCEDSCDVPMVQCDFVPIGDLENREKD
AIVDVIGVCKSVDELTRLTTKSNREVSKRTLSLMDMSGKLVTVTLWGEEAEKFDGSGQPI
VAIKSAKLSDFGGRSLSASFSSTMMINPDIPEAYKLRGWFDKEGHAMEGQSLTEVRGAGG
RLSENWKSLADVKSEHLGHGDKADYYSCIATIVFLRKENCLYQACPTQDCNKKVVDQQNG
MFRCEKCDKEFPNFKYRLILSANIADYADNQWVTCFQDSAEAILGQNAAYLGQLKDSNES
AFDEIFQQANFNTFIFRNRVKLETYNDESRIKATVMDVKPVDHREYSKRLIMNIRSMGAK
NT seq
1803 nt
NT seq
+upstream
nt +downstream
nt
atggcaagtctttcaacgggcgcgatagaggctttagcaaatggcagcggttggaacgaa
gcagtgctacagttggtgaacattcgcaagatcgatggcgggagtgggccctctcgcttc
agggtgatgatgagcgatggacgacacacactgtcatccttcatgctctccactcagcta
aactacatggccgaggaaaaccttctggtcccaaactgcgtgtgcgtcctgaagaggcag
gtcaccaatatgctcaaagatggacgacgagtggtaatcattttagaaatcgacgtcatc
aaacctgctgacgcctctggtaaaataggagacccagttccttactctgacggccagagc
agaggcccgcaaccagctccagtccctgaaagcagaccgcctctgcagccacaaaacaga
aatgaagctgtggtcagaaatttgaagagagactttgcaaagaagattccttctgctttg
cctgatactccaggaggaagctccaaaattgtccccatcgccagcctcaacccctaccag
tccaagtggacgatccgggctcgtgtgaccaataagagctccattcgtacgtggagcaat
gctcgaggcgaaggaaaactcttctctatggagatcgtagatgaaagtggggagatccgt
gtgaccggcttcaaccaagaagtcgacaagttcttctctctcatcgaggtcggcaaggtc
tactacatctccaagggctctctgaagatcgcaaacaagcagtacacgtcggtgaagaac
gactacgaaatgactctcaacggagagtccaccgtcattccctgtgaggacagctgcgac
gttcccatggtgcagtgcgactttgtccccatcggcgacttggagaacagagagaaagac
gctattgttgatgtgattggagtgtgcaagagcgtggatgagctgacccgcctgacgacc
aagtccaaccgcgaagtgtccaagaggacgctgagtctgatggacatgtccgggaagttg
gtgaccgtcaccctgtggggagaggaagcggagaagtttgacggctccggacagccgatc
gtagccataaagagcgccaagctctcggactttggaggccgctcgctttccgcgtccttc
agcagcaccatgatgatcaacccagacatcccagaggcgtacaagctcagaggctggttt
gacaaggaaggacacgccatggaaggacagtctctgaccgaggtgaggggtgccggcgga
agactctcggagaactggaagtccttggctgacgtgaagtcagagcatctgggacacggt
gacaaggccgactactactcctgcatagccaccatcgtgtttctgcgtaaggagaactgc
ctttaccaggcctgcccgacccaggactgcaacaaaaaggtggtggaccagcagaatggc
atgttccgctgcgagaagtgcgataaagagtttcccaacttcaagtaccgcctcattctg
tccgccaacattgcagactacgccgacaaccagtgggtgacttgcttccaggacagcgct
gaggccattctgggccagaacgccgcgtacttgggccagctcaaggactcaaatgaatcg
gcattcgacgagatcttccagcaagcgaacttcaacacttttatctttcgcaacagagtg
aagctggaaacatacaacgacgagtcaaggattaaagcgacggtgatggacgtgaagcca
gtcgaccacagagagtacagcaagaggctgatcatgaacatacggagtatgggagccaag
tag
DBGET
integrated database retrieval system
