Poecilia mexicana (shortfin molly): 106915510
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Entry
106915510 CDS
T08022
Symbol
tarbp1
Name
(RefSeq) probable methyltransferase TARBP1 isoform X1
KO
K15333
tRNA guanosine-2'-O-methyltransferase [EC:
2.1.1.34
]
Organism
pmei
Poecilia mexicana (shortfin molly)
Brite
KEGG Orthology (KO) [BR:
pmei00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pmei03016
]
106915510 (tarbp1)
03036 Chromosome and associated proteins [BR:
pmei03036
]
106915510 (tarbp1)
Enzymes [BR:
pmei01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.34 tRNA (guanosine18-2'-O)-methyltransferase
106915510 (tarbp1)
Transfer RNA biogenesis [BR:
pmei03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
106915510 (tarbp1)
Chromosome and associated proteins [BR:
pmei03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
106915510 (tarbp1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SpoU_methylase
TARBP1
Motif
Other DBs
NCBI-GeneID:
106915510
NCBI-ProteinID:
XP_014838631
Ensembl:
ENSPMEG00000017857
LinkDB
All DBs
Position
Unknown
AA seq
1632 aa
AA seq
DB search
MSSALIQAVLSSSPNYDTLFESLCWPEDSWPQTERVEALTALIEALGPFLTDSDSVQTPL
TGVNRSGIRDKIESVIWSKCLPFLCRLSAEARDGTRCRESTATVCRLLGVSVGVCGGNVR
TRVVSSILPSLQRMSEEEPLTPGTLSVQVAAEVLAALMPLLSADEELTLETLNCALSSVR
SLPDYLVSKVMVRIILTSLSCCSGARSNIILKRILDDVCSWHSTERTPVVTERTLLCLTV
LSDHLLKSHTPGSAGCREADPRLRPQFWIICQDGLTHRDSVSRKRALYLLKRCAALSEED
GFDSRSSTSEDEKNLEAGETLFKWTPSKSKPLREFWEDYTLVMETLEENQVHVVRPVLNR
IDTLIQATVNDSEGSGLFHPSWLLCVYQRMFHSENKSLMREGVCHLLQLQVLQQPAFAAA
FSQFVVGSFMNVLSETSLFCRSPGQSVGDCPELAVKLQVFLVTFFTSLPSEDRGCVLFQL
IQQLSSKHWCAVPLLFVCQAFSHLPPSPLLKISSLSALREVLRCTMITHQVLLRGAAQCF
LLKSALSLTDVSEVTVDDMFSFLMHFRADESLCRGTELWNELCIWLSEHECSFKSRILEG
DFTDDPTRKETIRAYVQQEVLAYLRVPASTGQAERLPDSREADKLARALLLCVDMERRRL
GGETGEILGSLLSPLLDTLSRVYANIYLPVRKSDKSLQLLLRLLQLGTKPCGQQKEVEED
EVMFAIEQTFLKHVNPVQDFILRRLCGELQELFDVERAELYLSVLRQLVVMCRSSSRCPK
NIQQFAFPKLIKYSLSVLLEPTQQVPFVANQVSKAVSMASMAAVCELLQQGGISMRADTA
SALKSMNDYFCTLKTSSQCQSSLGNINKSLMKPQLLGSSSDLEAQSLLQQDWGRIAANFL
RDQWICLNFLIRTVGISTSVELSQVPETLGAALSCSVEALALLPSDLVLPVLTFMNTLLP
QLVHDQEDLCVQAVTLSWELVQGLSTNAHDFWPALKGFVSMAFQHKLLQLTHGQAPILTT
ALKKIFTDWLELSQSKSGVFGVLLQHCCQTWLPNDPGSRDQAAVVFSSVFNHLDIVTEAC
VYGPVLRRDQRLVLDVQIYVEQLGAKCAANAAVASDIRDDQLPRTCVLTFLSRLDPSDQQ
HQRLMEDLVLELMRKDNLISKSKVRYYGNSLQHRVKNRAWQTLLLLLPKLKEEFVATLVN
HVFEAGFCSNQASVKYLIEWMMILILVKYPHHIDKFWSCFNFDHEKTKTSICTFLSVLVH
FSVIVPHVEDKVGQLRRALDVILQSCFNHNFSVRLYALLALKKVWSLAEEEEEDDEAFKG
LSSVVTACLNQAEAMQSTGNASKNWLRIQGHFFFGAFHPIRDYSMETIFHIFPSLSELAD
DEWIPPWKFEKLSFFPESLLIPLRNSAPELGQLQAGDWVQQDQSEQDKEERWSEVQKKIT
PWRSGVNDQEPELKLVPAQRAARLGKQHGTLLVVASLIDKPTNLGGLCRTCEIFGASGLV
LDSLHHLNDKHFQSLSVSAELWLPLLEVKPVELTHFLQVKKSEGYCIVGVEQTANSQKLQ
DFKFPEKTLLLLGNEREGIPANLLQMLDVCVEIPQQGIIRSLNVHVSAALLIWEYTRQHL
IAGSQEVYSQCG
NT seq
4899 nt
NT seq
+upstream
nt +downstream
nt
atgtcttccgctttgattcaggcggtactgagcagctctcctaattacgatactttgttt
gaatctctgtgctggccggaggattcgtggccgcagacggagcgtgttgaggcgctcact
gctctcatcgaagctctaggaccgtttctgaccgactcggattcggttcagactccactg
acgggtgtaaacagaagtggcattcgtgacaaaattgagtcggtcatttggtcgaaatgt
ctgccatttctttgcagactctcagcagaagcgagggatggtacgcgctgcagagagagc
acagccaccgtctgcagattgctcggtgtctccgtgggtgtgtgcgggggaaacgtgcgg
actagagtggtttcatcaatcctgccgtcgttacagcggatgtcagaggaggagccgctt
acgccggggactctcagtgtgcaggttgctgctgaagtcctggctgctctcatgcctctt
ctgtcagcggatgaagaactcacactcgagactctaaactgtgcgctgtcctctgtcaga
tcactccccgattatctggtatccaaagtaatggtcaggatcattttaacttcgctcagt
tgctgcagcggtgcgaggtccaacatcatcctcaagcgcatcctggatgatgtttgtagc
tggcactccacggagcgaacaccggtggtcacagagaggacgctgctgtgtttgaccgtc
ctgtcagaccacctcctgaaatctcacacccccggctccgccgggtgccgcgaggccgac
ccacgtctgcgtcctcagttctggataatttgtcaggacggactgacgcacagggacagc
gtgtcacgcaagagggctctgtacctgttgaaaagatgcgcagcattatccgaagaggat
ggctttgattcccgttcttctacatcagaggatgaaaaaaatctggaagcaggagagaca
ttatttaaatggacccccagcaaaagcaaaccgctgagggagttctgggaggattacact
ctggtgatggaaacgctggaggagaatcaggttcatgttgttcggccagttttaaacaga
attgacacgttaatccaagcaacagtgaatgatagtgaagggtcaggcctgttccacccg
tcctggctgctgtgtgtgtaccagcgcatgttccacagtgagaataaatccttaatgaga
gaaggagtgtgccatctgcttcagctgcaggttcttcagcagccggcctttgcagcggcc
ttttctcagtttgtcgtgggttcctttatgaatgttctgtctgaaacgtcccttttctgt
agatcaccagggcagagtgtaggagactgtcctgagctggcggttaaactccaggtcttc
ctggtcaccttcttcacaagcctgccatcggaggacagaggttgtgttttgtttcagctg
attcagcagctcagctccaagcactggtgtgccgtgccgctcctcttcgtctgtcaggct
ttttcacatctccctccaagtcctctgctgaagatcagcagcctatctgctctgcgggag
gtgctgcgctgcaccatgatcactcatcaggttctgctaagaggagccgcacagtgtttt
ttactaaagagcgccctctctctgacagatgtgagtgaagtgactgtagacgacatgttt
agtttcctgatgcattttcgtgccgatgagtctttgtgtagggggacagagctatggaat
gagttgtgcatctggttgtcggaacatgaatgcagtttcaagtccagaattctggagggc
gatttcaccgatgatcccacacgaaaagaaaccattagagcctatgttcaacaagaggtg
cttgcttatcttcgcgttccagcaagcacaggtcaggcagaacggctacctgactctaga
gaggctgataagctggcaagagcccttctgttgtgtgtggacatggagaggaggcgactg
ggaggagaaaccggtgaaattctgggttcacttctgtctccgctactggacaccctgagc
agagtctacgccaacatctacctgcctgtccgtaagagtgacaagagcctgcagctcctg
cttagactgctgcagcttgggacgaagccttgtggtcagcaaaaagaagtggaagaggat
gaggtgatgtttgccattgagcaaacctttcttaaacatgtcaatccagtccaggatttt
atcctgaggaggctgtgtggggagctgcaggagctctttgacgttgaacgggccgagctg
tatctgagtgtcctgaggcagctggtcgttatgtgcagatcttcgtctcgctgccccaag
aacatccagcagttcgcgttccccaaactcataaagtacagcctttcagttttgcttgag
ccaacccaacaggtcccatttgtggccaatcaggtgtccaaggctgtcagtatggcgtct
atggctgctgtgtgtgagctcttgcagcaaggaggaattagtatgagagcagatactgct
tctgccctgaagtccatgaatgattatttctgcactttgaagacttcctcacagtgtcag
tcatctcttggaaacattaacaaatccttgatgaaaccacagctattaggtagttcaagt
gaccttgaagcccaaagcctcctgcaacaggactggggacgcattgctgccaacttcttg
cgggaccagtggatttgtctaaacttcctgattaggactgtagggatttcaacatctgta
gaactttcccaagtgcccgagaccctcggagctgctctgagttgcagcgttgaggccctg
gctctgctgcccagtgaccttgtgctgcccgtgctaaccttcatgaacacgctgctgcca
caactggtgcacgatcaggaggatctctgtgtgcaggcggtcactctgagttgggagctt
gtacaggggcttagcaccaacgctcatgacttctggccagcactaaagggcttcgtctct
atggccttccagcacaaactcctgcagctgacacatggtcaggctccgattctcacgact
gcactgaaaaagattttcacagactggttggagctgtctcagtcgaagagcggtgtcttc
ggtgtgctacttcagcactgctgtcagacctggctgcccaatgacccaggcagcagggat
caggctgctgttgtgttctctagtgtttttaaccacctggatatagtcactgaggcctgt
gtttatggacctgtgctcaggagagatcaacgactcgtcctggacgtccagatatatgta
gagcaacttggtgcaaagtgtgccgctaatgctgctgttgcaagcgatatcagggatgat
cagctgccacgcacatgtgtgctgacatttcttagccgcctggatccttctgatcagcag
catcagagactcatggaggatttagtgttggagcttatgagaaaggacaacctcatatca
aagtccaaagtccgttactatggtaactccctgcagcatcgggtcaaaaacagagcatgg
caaacactgctgctgttgcttcccaaactcaaagaggaatttgttgccactctggtgaac
cacgtctttgaagctgggttttgcagcaaccaagcctcagtgaagtacctgattgaatgg
atgatgattcttattcttgtcaagtatccgcatcacattgacaaattctggagctgcttc
aactttgatcacgaaaagacaaagacgagcatctgcaccttcctgtctgtcctggttcac
ttcagtgtcatcgtgccacatgttgaggataaggtcgggcagctgcgtagagccctggac
gtcatcctgcagtcgtgtttcaatcacaacttcagcgtgcgcctgtatgcgttactggcg
ttgaagaaggtgtggagcctcgcagaggaggaggaagaggatgatgaagctttcaagggg
ctgtcttctgtggtgacagcctgtctgaaccaggccgaggccatgcagagcaccggaaac
gccagcaagaactggctgaggattcagggacacttctttttcggagcctttcatcccatc
agggattacagcatggagaccatatttcacatttttcccagtctgtcagagttggccgac
gatgagtggatcccaccgtggaagttcgaaaagctgtcattcttccctgaaagtctgtta
atcccgttgaggaattctgctcctgagttgggccagctccaggctggagattgggtccag
caagaccaaagcgagcaggataaagaggagcgctggtctgaggtgcagaagaagatcaca
ccctggaggtcaggggtcaacgatcaggaacccgaactgaagctggttccggctcagcgg
gcagctcggctgggcaaacagcacggcaccctgctggtggtggcttccttgattgacaag
cccactaatttaggaggtctctgcagaacatgtgagatatttggggcgagcggtctggtt
ctggacagtctgcaccatctcaatgacaaacacttccagtccctgagtgtttcagctgag
ctttggcttcctttgctagaggtgaagcccgtggagctcactcatttcctccaggtaaag
aagagcgaaggttactgcatcgtcggagtggagcagactgccaacagtcagaagctccag
gacttcaagttccctgaaaaaactctgctacttctgggcaacgagcgggaaggtattcct
gccaatctgctccagatgttggacgtgtgtgtggagatccctcaacaaggcatcatccgc
tcactcaatgtccacgtgagcgctgccctgttgatctgggagtatacacggcagcacctc
atcgccggatcacaagaagtctactcgcaatgcggctga
DBGET
integrated database retrieval system
