Poecilia mexicana (shortfin molly): 106915590
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Entry
106915590 CDS
T08022
Symbol
rc3h2
Name
(RefSeq) roquin-2 isoform X1
KO
K15690
RING finger and CCCH-type zinc finger domain-containing protein
Organism
pmei
Poecilia mexicana (shortfin molly)
Brite
KEGG Orthology (KO) [BR:
pmei00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pmei03000
]
106915590 (rc3h2)
04121 Ubiquitin system [BR:
pmei04121
]
106915590 (rc3h2)
Transcription factors [BR:
pmei03000
]
Eukaryotic type
Zinc finger
Cys3His zinc factors
106915590 (rc3h2)
Ubiquitin system [BR:
pmei04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
106915590 (rc3h2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Roquin_1_2-like_ROQ
ROQ_II
zf-RING_5
zf-CCCH
zf-RING_2
zf-RING_UBOX
zf-CCCH_4
zf_CCCH_4
Prok-RING_4
Vesi_VP2
zf-C3HC4_2
zf-C3HC4_4
Motif
Other DBs
NCBI-GeneID:
106915590
NCBI-ProteinID:
XP_014838765
Ensembl:
ENSPMEG00000014187
LinkDB
All DBs
Position
Unknown
AA seq
1110 aa
AA seq
DB search
MPVQAAQWTEFLSCPICYNEFDSSGHQPISLGCSHTVCKTCLHKLHRKACPFDQTPISTD
IDLLPVNCALLQLVGAQVPDVPPVSLSSAADVEHYDLCRLCVEELALYLKPISGAKGVAN
LSPSVLSRPMQRKLVTLVNCQLVEEEGRVRAVRAARSLGERTVTELILQHQNPQQLSANL
WAAVRARGCQFLGPAMQEDALKLVLLALEDGSALSRKVLVLFVVQKLEARFPQASKTSIG
HVVQLLYRASCFKVTKRDEDSSLMQLKEEFRTYETLRREHDAQIVHIAMEAGLRISPEQW
SSLLYGDLVHKSHMQSIIDKLQSPESFAKSVQELTIVLQRTGDPANLTSLRPHLELLANI
DHNPDAPAPSWAELESVMLAVKLVVHGLVEFIQNFSKKSHETPQPQANSKYKTSMCRDLR
QQGGCPRGTSCTFAHTQDELEKFRLRNKKSSSVVRPFSLATKGLKDAEENMEEASSLTNP
LLISRGSGGVEELKGTLTNGTSGANRTKSGSTELKPMSPPRTPVSHSSASSPLSSAGGAD
VSAPLPRHGQFIISSPHPSQPSELYYREPHPGYDTGHFQPNSGSYYPSALHPPHKSCMAR
FLRSSNVQESSLPPSSGVSSYPNDPQAPHPASSPSSGFPPRDQMGGPTFHPHPGQGQYRH
LAPAHGVYAPLYDSRRVWRPQLYHREDARSNSLPPEVLHSSVYQPPLRERFNSLDSNYCS
GAEHRAGLHRDYGRVPLGYEDLFRQKQEHWTHHIHHHHNPNRPSQSSPIFTTDFGAEHVE
SSGGQCMGCRLRGEDSLARYSLWSCGSAGPSLSPFEPEPLKHTPAHSHSHSEHLELDGIE
GGQGGVSGTGKRRLPSLDHYRRLKEEDPIIPFSEAPIISKWGAISRASRTGYHTTDPVQA
TACQGSASTTAINFKDYNHNFDHGDYRWSSRGSDSSSHSSFLESEHLCATELNGHQTSIG
SGEKIVLDHLQAHQTTFQRDQNRTESESDPDRDIELELRALDMEDSVHHEIKSQERLDLS
SPESQDASHLLPPPCSSPLCSSPVEDHTQSESVLTGKMDPLQLKKMAFRKSLSPMGLGSG
SLGIRKSGHQEAGVTNRTSTTTRLLRQDSS
NT seq
3333 nt
NT seq
+upstream
nt +downstream
nt
atgccggtgcaggcggcccagtggacagagtttctgtcttgtcccatctgctacaatgag
tttgacagcagcggccaccagcccatcagcttgggctgctcccacacggtgtgcaaaacg
tgcctgcacaaactgcaccgcaaggcctgccccttcgatcagacgcccatcagcacggac
atcgacctgctgccggtcaactgcgccctgctgcagctggttggagcacaggtcccagat
gttcctcctgtgagtctgagcagtgcagcagacgttgagcactacgacctctgccgactg
tgtgtagaagagctggctctctacctgaaacctatcagtggtgccaaaggtgtggcgaac
ctgagtccgagcgtgctcagtaggcccatgcagagaaagctggttaccctggtgaactgc
cagctggtagaagaggagggtcgtgtgcgggcggtccgggcagcccgctcactgggggaa
cggactgtaactgaactcattctgcagcaccagaacccccagcagctctctgctaacctc
tgggcagcagtgagggcacggggctgccagtttctgggtcctgcaatgcaagaagatgca
ctgaagctggttttactagctttggaggatggttctgctctgtctaggaaggtgctggtt
ttgtttgtggtccagaagctggaggcccggttcccccaggcatccaaaaccagcataggc
cacgtggtgcagctgctgtacagggcctcctgctttaaggtgactaagcgggatgaagat
tcctccctgatgcagctgaaggaggagtttcgaacgtacgagacgctaaggagagaacat
gatgctcagattgtccacattgccatggaggcaggccttcgaatttctcctgagcagtgg
tcctctctgttatatggagacctagtccacaaatcacacatgcagtccataattgacaag
ttgcagtctccagaatcatttgcaaagagcgttcaggaactgacgattgttctgcagagg
acgggagacccggccaacctcacaagccttagaccacacctagagctactggccaacata
gaccacaacccagatgcccctgcaccatcctgggcagagctggaaagcgtgatgctggct
gtaaagctggtggttcatggactggtggagttcatacagaacttcagcaagaagagccat
gaaactccacagcctcaggccaacagcaaatataagaccagcatgtgcagagatcttcgt
cagcagggaggctgtcccagaggaaccagctgtacatttgcgcacacacaagatgagctg
gagaaattcagactgaggaacaagaagagcagcagcgtggtccggccattctctttagcc
actaaaggcctcaaagatgcagaagagaacatggaggaagcttccagcctgactaacccg
ctgctgatctccagagggtcaggcggggtggaagaactgaaaggaactttgacgaatgga
accagtggggctaacagaaccaaatcagggtccacagagctgaagcccatgtcccctccc
aggactccagtcagccactcttcagcttcctctcctttgagttctgcaggtggcgctgat
gtcagcgctcctcttcctcgacatggtcagttcatcatctcctctccacacccttctcag
ccatcagagctatactaccgggagcctcaccctggttacgacacggggcactttcagcca
aactcaggttcttactatccatctgctcttcaccctcctcacaaatcctgcatggctcgc
ttcctgcggtcctccaatgtccaggaatcatcgctgccaccttcgtctggtgtttcctct
taccccaatgacccccaggctcctcacccagcctcgtccccttcgtcagggtttccacct
agagaccagatgggaggccccaccttccatccccatccaggacagggtcaatacagacat
ttggctcctgctcatggtgtttatgctcctctttatgacagcaggagagtatggaggcct
cagctgtaccacagagaggacgccaggagcaactcactgcctccagaggttcttcactcc
tctgtctaccagcctccactcagggagcgattcaactctctagacagtaactactgctct
ggagcggagcaccgtgctgggctgcacagggactatggacgggttcctctgggatatgag
gatctatttagacagaagcaggaacactggactcaccacatccaccaccatcacaatccc
aacaggccctcccagtcttcccccatattcaccactgattttggagccgagcatgtagaa
agcagtggaggtcagtgtatgggatgtaggctcaggggcgaggacagtttggcccgctac
tctctgtggtcctgcggttctgccgggcccagccttagcccctttgagcctgaacctctc
aaacacaccccagctcactcccattcccactcagagcatctggaactagacggtatcgaa
ggaggccaaggtggtgttagcggcacaggaaaacgacggctgccctcgttagatcactac
cgacgtttgaaagaggaagatccaattattcccttcagtgaggcgcccatcatctcgaag
tggggtgccatttctagggcatcacgcacaggctatcataccaccgaccccgtccaagct
acggcctgccaaggcagcgccagcaccacagcaataaacttcaaagattacaaccacaac
tttgatcacggcgactacaggtggagctccagaggatcagactcctctagccactccagt
ttcctcgagagtgagcatctttgtgcaacggagctgaatggccatcaaacttcaataggc
agtggagagaaaattgtgttggaccacttgcaagcccaccagacaaccttccaacgggat
caaaaccgaacagaaagcgaatctgacccggatcgagacattgagcttgaactgcgagcg
cttgacatggaggattcagtgcaccacgaaatcaagtctcaggagcgtttagatctgtcc
agccccgagtctcaggatgcttcccacctcctcccacctccctgctcatctcctctgtgc
tcctcccctgtagaggaccacacccagtcagaaagtgtactgacagggaagatggaccca
ctccagctaaaaaagatggcctttaggaaatctctgtcccctatggggctgggatcagga
agtctgggcatcaggaagtctgggcatcaggaagctggtgttacgaaccggacctccaca
actacgcgactcctccgccaagactcatcctga
DBGET
integrated database retrieval system
