Poecilia mexicana (shortfin molly): 106915929
Help
Entry
106915929 CDS
T08022
Name
(RefSeq) exosome complex component RRP43-like
KO
K12586
exosome complex component RRP43
Organism
pmei
Poecilia mexicana (shortfin molly)
Pathway
pmei03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pmei00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
106915929
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pmei03019
]
106915929
Messenger RNA biogenesis [BR:
pmei03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
106915929
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
106915929
NCBI-ProteinID:
XP_014839368
LinkDB
All DBs
Position
Unknown
AA seq
267 aa
AA seq
DB search
NLKLFPIQKENCRPDGRELSEFRTTTLNVGSISTADGSALVKIGNTTIICGIKAELANPT
AEAPGKGYIVPNVDLPPLCSSRFRPGPPGEQAQAASQFIADVIESSEVIKAEDLCVDRGK
LCWVLYCDIMCLDYDGNILDACIIALLAALKNTQLPEVTVNKETCSPEVNLEKRQRLHIH
KHPASASFCVFDDSILIVDPTAEEESLSTAHLTVVTDEGGRLCSVHKPGGTSLSGEKLQE
CINRATARQREIHKLIDKVLDSVKTMK
NT seq
804 nt
NT seq
+upstream
nt +downstream
nt
aatttgaaattgtttccgatccagaaagaaaactgtcgacctgatggacgggagctgtct
gaattcagaaccaccacactgaacgttggatccatatccacagcagatggttcggcattg
gtgaagataggaaacacaacgattatctgcggaatcaaagcggagctggctaaccctaca
gcagaggcccctggtaaaggttacattgtgcccaacgtggatttgcctcctctgtgttcg
tcccgctttcggccgggtccaccaggagaacaggcccaggctgccagccagtttattgct
gacgttattgaaagctctgaggtgatcaaagcagaggacctatgcgtcgacagaggaaag
ctttgttgggtgctctactgtgacattatgtgtctcgactatgacgggaacattctggac
gcttgtattatcgccctgctggctgccctgaagaacacacagctcccagaagtcaccgtg
aataaagagacgtgttcaccagaggtgaatctggaaaagcgacaaaggcttcatattcac
aaacatcccgccagtgcttctttttgcgtctttgatgactctatcctgattgttgacccc
acagctgaggaggagagtctgtcaaccgctcacctgactgtggtcacagatgaggggggt
cgtctctgttctgtacataaaccaggtggaacgtcactgtcaggagagaagctgcaggag
tgcatcaaccgagcaacagcccggcagagagagatccacaaactcatcgacaaggttcta
gacagcgtgaagacgatgaaataa
DBGET
integrated database retrieval system
