Poecilia mexicana (shortfin molly): 106916279
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Entry
106916279 CDS
T08022
Symbol
rorc
Name
(RefSeq) nuclear receptor ROR-gamma isoform X1
KO
K08532
RAR-related orphan receptor alpha
Organism
pmei
Poecilia mexicana (shortfin molly)
Brite
KEGG Orthology (KO) [BR:
pmei00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pmei03000
]
106916279 (rorc)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
pmei03310
]
106916279 (rorc)
Transcription factors [BR:
pmei03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
106916279 (rorc)
Nuclear receptors [BR:
pmei03310
]
1. Thyroid hormone like
1F. RAR-related orphan receptor
106916279 (rorc)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
DUF3135
Motif
Other DBs
NCBI-GeneID:
106916279
NCBI-ProteinID:
XP_014839945
Ensembl:
ENSPMEG00000011214
LinkDB
All DBs
Position
Unknown
AA seq
525 aa
AA seq
DB search
MPAPAGALEQPTEVSERVCRPVQRCDRSGMEYEESDFLPADTPRKKGGAVSKKTHLTQIE
VIPCKICGDKSSGVHYGVITCEGCKGFFRRSQLPTVSYSCSRQSNCQIDRASRNRCQHCR
LQKCLAQGMSRDAVKFGRMSKRQRDSLIAEVERHRQQQQQQQLQDDTQAELSYPPKNRQD
HTPQLLQPIATPYPYVGDTYSAEVHPYLVYSPSDSQGYRGSGVSPTSRFQGRGDSGGHHD
IRGFDSRQQHQDLMALHSYNPLDDLYNHYPHSLRNIDELCASIVRSHRETSQYRLEELQA
LRWKVFSREEIQAYQSKTVDEMWQHCAVRLTEAVQYVVEFAKHIPGFRMLSQNDQIALLK
TGSMEVVLVRMCRFFNTENNTVFFDGKFAGTEVFKSLACGDLIAAVFDFAHGLCALKLTE
QQLALFSALVLINPDRPSLEDRVRVQRVHRSVEVGLTHILHRDNHDSLLHKLYQRMAVLR
SLCSLHMEKLRWFSQRYPLTAHSLFPPLYKELFASEAELLPGAAH
NT seq
1578 nt
NT seq
+upstream
nt +downstream
nt
atgcctgcgccggccggggcgctagagcagccaacagaggtgagtgaaagagtgtgtagg
cccgtccagcgctgtgacaggagcggcatggaatatgaggagtcagactttctacctgca
gacacccccaggaaaaaaggaggcgccgtgtccaagaagactcatttgacccagattgaa
gttatcccatgcaagatttgtggcgataagtcttctggagtgcattatggagtcatcaca
tgtgaaggctgcaagggctttttccggcgcagccagcttcccaccgtgtcctactcctgc
tccaggcagagtaactgtcagatcgaccgggccagccggaaccgctgccagcattgccgc
ttgcagaagtgtttggctcagggcatgagcagagacgctgtgaagtttggccgcatgtcc
aaacgtcagagggactctctcattgctgaagtggagcgacacagacagcagcagcaacag
cagcagcttcaggacgacacgcaggcggagctgtcctacccacccaaaaaccgccaggac
cacaccccgcagctcctccagcccatcgccacgccgtacccctacgtcggcgacacctac
agcgcagaggtccacccctatctggtttactccccgagcgactcgcaggggtaccggggc
tccggtgtctcccctacgtccagattccaggggcggggggacagcggtggacaccatgac
atcagaggatttgactccagacagcaacatcaggacctcatggctcttcattcctacaat
cctctcgatgacctctacaaccactatccccactctctgcgaaacatagatgagctgtgt
gccagcattgtgcgttcccacagagaaaccagccagtacagactggaggagctgcaggct
ctcagatggaaagtgttcagcagagaggagatccaagcctaccagagcaagacggtggac
gagatgtggcagcactgtgccgtccgactgactgaagccgttcagtatgtggtggagttt
gcaaaacacatcccaggtttccgcatgctcagccagaacgaccagatcgcactcctcaaa
accggctccatggaggtggttctggtccgaatgtgccgcttcttcaacacagaaaacaac
actgttttcttcgatggaaaatttgctgggactgaagtcttcaagtctctggcgtgcggt
gatttaatcgcagcggtgttcgacttcgctcacggcttgtgtgctctgaaactcacagag
cagcagctcgccctcttcagtgctctggtcctaatcaaccctgaccgtccctctctagag
gacagagtgagagtccagcgagtacacagaagtgtggaggtgggactcactcacatcctt
caccgagacaaccacgacagtctgttgcataagctctaccagaggatggcagtgttgcgt
tcgctgtgcagcctgcacatggagaagctgcgctggttcagccaacgatacccgctcact
gctcactccctgttccccccgctctacaaggagctgtttgcgtccgaggccgagctgctg
ccgggggccgctcactga
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