Poecilia mexicana (shortfin molly): 106916297
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Entry
106916297 CDS
T08022
Name
(RefSeq) spectrin beta chain, non-erythrocytic 1 isoform X1
KO
K06115
spectrin beta, non-erythrocytic 1/4/5
Organism
pmei
Poecilia mexicana (shortfin molly)
Pathway
pmei04517
IgSF CAM signaling
pmei04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
pmei00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
106916297
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
106916297
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
pmei04812
]
106916297
Cytoskeleton proteins [BR:
pmei04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
106916297
Intermediate filaments
Intermediate filament-binding proteins
106916297
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Spectrin
CH
CAMSAP_CH
BORCS6
Motif
Other DBs
NCBI-GeneID:
106916297
NCBI-ProteinID:
XP_014839984
LinkDB
All DBs
Position
Unknown
AA seq
2120 aa
AA seq
DB search
MELQSAPLPPLSPLSPLDYAGPRTPSPVPGQAPSPSRGAASPGPSFNYNQLEGRFKQLQD
EREAVQKKTFTKWVNSHLSRVSCRITDLYMDLRDGRMLIKLLEVLSGERLPKPTKGRMRI
HCLENVDKALQFLKEQRVHLENMGSHDIVDGNHRLTLGLIWTIILRFQIQDISVETEDNK
EKKSAKDALLLWCQMKTAGYPNVNIHNFTTSWRDGMAFNALIHKHRPDLIDFDKLKKSNA
HYNLQNAFNLAEQHLGLTKLLDPEDISVEHPDEKSIITYVVTYYHYFSKMKALKVEGKRI
GKVLDNAIETEKMIEKYESLASDLLEWIEQTIIILNNRKFANSLVGVQQQLQAFNTYRTV
EKPPKFTEKGNLEVLLFTIQSKMRANNQKVFTPREGKLISDINKAWERLEKAEHERELAL
RTELIRQEKLEQLARRFDRKAAMRETWLSENQRLVSQDNFGFDLQAVEAATKKHEAIETD
IAAYEERVQAVVAVARELEAESYHDIKRITARKDNVIRLWEYLLELLKARRHRLELNLGL
QRVFQEMLYIMDWMDEMKMLLLSQDYGKHLLGVEDLLQKHALVEADISIQADRVRNVNSN
AQKFASDTDGYKPCDPQVIRDRVAHMEFCYQELNQLAAERRARLEESRRLWKFFWEMAEE
EGWIREKEQILSSEDHGKDLTGTVRLLSQHKAFEDEMSGRAAHLQQTVRQGQQLVDDNHF
GAEKIKERIQDIQDQWAALERLSAVRKTRLQEACNLHQFQADADDIDTWMLDVLRIVSSE
DVGHDEFSAQALVKKHKDVAEEISSYRPVIEALHEQAQTLPPQKAGSQEVQARLAGIEER
YAEVAELTRLRKQALQDALALYKMLSEASACELWVDEKEQWLNGMDIPEKLEDLEVVQHR
FESLEPEMNSQASRVAVVNQVARQLVHSGHPGETEIRAQQDKLNTRWSQFRDLVDQKKEN
LNSALGVQNYHLECNETKSWIKEKTKVIESTQELGNDLAGVMALQRKLTGMERDLAAIED
KLADLDKEAERLASEHPEQAGAIRGRLAEITAVWDDMKGTLKNREESLGEASKLQQFLRE
LDDFQSWLSRTQTAIASEDMPNTLAEAEKLLAQHENIKNEIRNYEEDYQKMRDMGDMVTQ
GQTDAQYMFLRQRLQALDTGWNELHKMWENRQSLLSQSHAYQLFLRDTKQAEAFLNNQEY
VLAHTEMPTTLEGAEAAIKKQEDFMTTMDANEEKISGVVDTGRRLVADGNINGERIQEKV
DSIDQRHKKNRQAAKDLLSKLKDNRDLQKFLQDCQELSLWINEKMLTAQDMTYDEARNLH
SKWLKHQAFMAELQSNKEWLDKIEKDGQALTAEKPETEAMVKEKLASLKVMWDDLESTTQ
TKAKCLFDANKAELFTQSCADLDKWLTGMDSQLQSDDFGKDLTSVNIMLKKQQMLESQVE
VRQKEVEELQKQSQALSQEGKGSDEADGKRISVENKFQALLAPLKMRRDNLMASREIHQF
NRDVEDEILWVEERLPLATSTDHGHNLQTVQLLIKKNQTLQKEIQGHQPRYDDIFERSQQ
VLRAGSPTAEPIRQRLTELQALWERIRKETENRHSRLGEAHEAQQYYFDAAEAEAWMSEQ
ELYMMSEEKAKDEQSSVAMLKKHQILEQAVEDYADAVHQLSSTSRGLVAAGHPDSERIGM
RQSQVDKLYAGLKDLAEERRGKLDERFRLFQLNREVDDLEQWIAEREVVAGSHELGQDYE
HVTMLQERFREFARDTGNIGQERVDGVNKLADELINAGHGDAATIAEWKDGLNEAWADLL
ELIDTRTQILAASYELHKFYHDAKEILHRILDKHKKLPEELGRDQNTVETLQRMHTTFEH
DIQALGTQVRQLQEDAVRLQSAYAGDKADDIQKREGEVLEAWKSLLEAAEARRSKLLDTA
DKFRFFSMVRDLMLWMDDVIRLIEAQEKPRDVSSVELLMNNHQGIKAEIDARNDSFTACI
ELGKALLARKHYAAEEIKEKLLQLTDKRKEMIDKWEDRWEWLRLVLEVHQFSRDAGVAEA
WLLGQEPYLSSREMGQSVDEVEKLIKRHEAFEKSAATWEERFAALERLTTMELLEVRRRQ
EEEERKRQPAEAAEAAAQSR
NT seq
6363 nt
NT seq
+upstream
nt +downstream
nt
atggagctacagagcgctccgctccccccactctcccccctctcccccctggactacgcc
gggccccggaccccgtccccggttccgggccaggcccccagccccagcaggggggctgcc
agcccggggcccagcttcaactacaaccagctggagggacgattcaagcagctgcaagat
gagcgtgaggcggtgcagaagaagaccttcactaagtgggtgaactcccacctgtccagg
gtgtcgtgtcggatcactgacctgtacatggacctgcgggacggccggatgctcatcaag
ctgctggaggttctgtctggagagaggctgcccaaacccaccaagggccgcatgcggatc
cactgcctggagaacgtggacaaggccctgcagttcctgaaggagcagcgggtccacctg
gagaacatgggctcccacgacatcgtggatggaaaccaccgcctcactctgggcctcatc
tggaccatcatcctgcgcttccagatccaggacatcagtgtggagacggaggacaacaag
gagaagaagtcggctaaagacgctctgctgctctggtgccagatgaagactgcagggtat
ccaaacgtcaacatccacaacttcaccaccagctggagagacgggatggccttcaacgcc
ctcatccacaaacacagacctgatctgatcgactttgataagctgaagaagtccaacgct
cactacaacctgcagaacgccttcaacctggcagagcaacacctggggctgaccaagctg
ctggacccggaagacatcagcgttgaacatcctgatgagaaatccatcatcacctacgtc
gtcacttattaccactacttctccaagatgaaggcgctgaaggtggagggcaagaggatc
ggcaaggttctggacaacgccatcgagacggagaagatgatcgagaagtacgagtctctg
gcgtcggacctgctggagtggattgagcagaccatcatcatcctcaacaacaggaagttc
gccaactcgctggtgggcgtccagcagcagctgcaggccttcaacacgtaccgcaccgtg
gagaaaccgcccaagttcacagagaaggggaacctggaggttctgctcttcaccatccag
agtaagatgagagccaacaaccagaaggttttcacgccgcgcgaaggaaagctcatctcc
gacatcaacaaggcctgggagcgcctggagaaggcggagcatgagcgggagctggccctg
aggacggagctgatccgccaggagaagctggagcagctggccagacgcttcgaccgcaag
gccgccatgagggagacgtggctgagcgagaaccagaggctggtctcacaggataacttt
ggattcgacctgcaggccgtggaggcggccactaagaagcatgaagccatagagacggac
atcgcggcgtacgaggagcgcgttcaggcggtggttgccgtggcgagggagctggaggcg
gagagttaccatgacatcaagcgcatcacggccaggaaggacaacgtgatccggctgtgg
gaatacctgctggagctgctgaaggcccggcgccaccggctggagctcaacctgggcctg
cagagggttttccaggagatgctctacatcatggactggatggacgagatgaagatgctg
ctgctgtcccaggactacgggaagcacctgctgggtgtggaggatctgctgcagaaacac
gctctggtggaggccgacatctccatccaggccgaccgcgtccgcaacgtcaacagcaac
gcccagaagtttgccagcgacaccgacggctacaagccctgcgacccgcaggtcatccgg
gaccgcgtggcgcacatggagttctgctaccaggagctgaaccagctggcggcggagcgg
cgcgcccgcctggaggaatcccgccgcctctggaagttcttctgggagatggctgaggag
gagggctggatccgggagaaggagcagattctgtcatcggaggatcatgggaaggatctg
acaggaacggtgcggctgctgagtcagcacaaagccttcgaggacgagatgagcggccgc
gccgcccacctgcagcagacggtccggcagggccagcagctggtggacgacaaccacttt
ggagccgagaagatcaaggagcgcatccaggacatccaggatcagtgggcggctctggag
cgcctgtctgccgtacggaaaacccgcctgcaggaggcctgcaacctgcaccagttccag
gctgatgctgacgacatcgacacctggatgctggatgtcctgcgcatcgtctccagcgag
gacgtcggccatgatgagttctcggcgcaggctctggtgaagaagcacaaagacgtggcg
gaggagatcagcagctaccggcccgtcatcgaggcgctgcacgagcaggcgcagacgctg
ccgccgcagaaggccggctcccaggaggtccaggcccggctggccggcatcgaggagcgg
tacgcggaggtggcggagctgacccggctcaggaagcaggcgctgcaggacgcgctggcg
ctctacaagatgctgagcgaggccagcgcctgcgagctgtgggtcgacgagaaggagcag
tggctcaacggcatggacatcccggagaagctggaggacctggaggtggtccagcaccgg
ttcgagagtctggagccggagatgaacagccaggcgtcccgcgtcgccgtggtgaaccag
gtggcccggcagctggtccacagcgggcaccccggggagaccgagatccgggcccagcag
gacaagctcaacaccaggtggagccagttcagagacctggtggaccagaagaaggagaac
ctgaactcggcgctgggcgtccagaactaccacctggagtgcaacgagaccaagtcctgg
atcaaggagaagaccaaggtgatcgagtcaacccaggagctgggcaacgacctggccggg
gtcatggcgctgcagaggaagctgaccggcatggagcgcgacctggcggccatcgaggac
aagctggccgacctggacaaggaggcggagcgcctggcgagcgaacacccggagcaggcc
ggcgccatcaggggccggctggccgagatcaccgccgtctgggacgacatgaaggggacg
ctgaagaaccgcgaggagtccctgggcgaggccagcaagctgcagcagttcctgcgggag
ctggacgacttccagtcgtggctgtcccgcacgcagacggccatcgcctcggaggacatg
cccaacacgctggccgaggccgagaagctgctggcccagcacgagaacatcaagaacgag
atccgcaactacgaggaggactaccagaagatgagggacatgggggacatggtgacgcag
ggccagacggacgcccagtacatgttcctgcggcagcggctgcaggcgctggacaccggc
tggaacgagctgcacaagatgtgggagaaccggcagagcctgctgtcccagtcccacgcc
taccagctgttcctgagggacaccaagcaggccgaggccttcctcaacaaccaggagtac
gtcctggcccacaccgagatgcccaccaccctggagggcgccgaggccgccatcaagaag
caggaggacttcatgaccaccatggacgccaacgaggaaaagatcagcggcgtggttgac
accgggcgccgcctggtcgccgatggcaacatcaacggcgagcgcatccaggagaaggtg
gactccatcgaccagagacacaagaagaaccggcaggcggctaaagatctgctgagcaag
ctgaaggacaaccgggacctgcagaagttcctgcaggactgccaagagctgtccctgtgg
atcaacgagaagatgctgacggctcaggacatgacgtacgacgaggccaggaacctgcac
agcaagtggctgaagcaccaggccttcatggccgagctgcagtccaacaaggagtggctg
gacaagatcgaaaaggacggccaggcgctgacggcagagaagccagagacggaggccatg
gtgaaggagaagctggcgtccctgaaggtcatgtgggacgaccttgagtcgaccacccag
accaaggccaagtgtctgtttgacgccaacaaggccgagcttttcacccagagctgcgcc
gacctggacaagtggctgaccggcatggacagccagctgcagtctgacgacttcggcaaa
gacctgacctccgtcaacatcatgctgaagaagcagcagatgctggagagccaggtggag
gtgcgtcagaaggaggtggaggagctgcagaagcagtcgcaggcgctgagccaggagggg
aaaggttctgacgaggcggacgggaagcgcatcagcgtggagaacaagttccaggcgctg
ctggcgccgctcaagatgaggcgcgacaacctgatggcgtcccgtgagatccaccagttc
aacagagacgtggaggacgagatcctgtgggtggaggagcggctgcctctggccacgtcc
accgaccacggacacaacctgcagacggtgcagctgctcatcaagaagaaccagacgctg
cagaaggagatccagggccaccagcctcgttatgacgacatctttgagcgcagccagcag
gtcctgcgggccggcagccccacggccgagccgatccggcagaggctcacggagctgcag
gcgctgtgggagcggatccggaaggagacggagaaccggcattcccgcctcggcgaggcc
cacgaggcccagcagtactacttcgacgctgcggaggccgaggcctggatgagcgagcag
gagctgtacatgatgtctgaggagaaggccaaggatgagcagagctcggtggccatgctg
aagaagcatcagatcctggagcaggcggtggaggattacgccgacgccgtccatcagctg
tccagcaccagccggggcctggtggccgcaggacaccccgacagcgagcgcatcggcatg
cggcagtcgcaggtggacaagctgtacgcggggctgaaggacctggcggaggagcggcgc
gggaagctggacgagcgtttccgtctgttccagctgaaccgggaggtggacgacctggag
cagtggatcgccgagagggaggtggtggccgggtcgcacgagctgggccaggactacgag
cacgtcacgatgctgcaggaacgtttccgagagttcgcccgcgacacggggaacatcggc
caggagcgcgtcgacggcgttaacaagctggcggacgagctgatcaacgcgggccacggt
gacgcggccaccatcgccgagtggaaggacgggctgaacgaggcctgggccgacctgctg
gagctcatcgacacgcgcacgcagatcctggccgcctcctacgagctgcacaagttctac
cacgacgccaaggagatcctgcaccgcatcctggacaaacacaagaagctgccggaagag
ctgggccgcgaccagaacaccgtggagactctgcagaggatgcacaccaccttcgagcac
gacatccaggcgctgggcacgcaggtccggcagctgcaggaagacgctgtccgtctgcag
tcggcgtacgccggagataaagccgacgacatccagaagagagaaggagaggtgctggag
gcctggaagagcctcctggaggcggcggaggcccggcgctccaagctgctggacacggcc
gacaagttccggttcttcagcatggtgcgggacctgatgctgtggatggacgacgtcatc
cggctcatcgaggcccaggagaagcccagggacgtgtcgtcggtggagctactgatgaac
aaccaccagggcatcaaggcggagatcgacgcccgcaacgacagcttcacggcctgcatc
gagctgggcaaggcgctgctggcccggaagcactacgctgcagaggagattaaggagaag
ttgctccagctgacggacaagaggaaagagatgatcgataagtgggaggaccgctgggag
tggctgaggctggtgctggaggtgcaccagttctcgcgggacgcgggcgtggcggaggcg
tggctgctgggccaggagccgtacctgtccagccgggagatgggccagagcgtggacgag
gtggagaagctcatcaagcgccacgaggccttcgagaagtccgccgccacctgggaggaa
cgcttcgccgcgctggagaggctgaccacgatggagttactggaagtgagaagaaggcaa
gaggaagaggagaggaagaggcagccggcagaggctgctgaggctgcagcccagagcagg
tga
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integrated database retrieval system
