Poecilia mexicana (shortfin molly): 106916401
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Entry
106916401 CDS
T08022
Symbol
shoc2
Name
(RefSeq) leucine-rich repeat protein SHOC-2
KO
K19613
leucine-rich repeat protein SHOC2
Organism
pmei
Poecilia mexicana (shortfin molly)
Pathway
pmei04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
pmei00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04519 Cadherin signaling
106916401 (shoc2)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_14
LRR_LRWD1
LRR_9
Motif
Other DBs
NCBI-GeneID:
106916401
NCBI-ProteinID:
XP_014840163
Ensembl:
ENSPMEG00000006400
UniProt:
A0A3B3WQP2
LinkDB
All DBs
Position
Unknown
AA seq
582 aa
AA seq
DB search
MSSTLGKDKDSKEKDPKSGPVGKEREKEAKTLSSLVKDGGKETKTKGKDAKEGKKDTSSS
TPGVAFSVDNTIKRPNPAPGTRKKSSNAEVIKELNKCREENSTRLDLSKRSIHMLPTAIK
ELTQLTELYLYSNKLQSLPAELGCLSELVTLALSENSLTSLPDSLDSLKMLRMLDLRHNK
LREIPPVVYRLTSLTTLYLRFNRITTVEKDIRNLSKLTMLSIRENKIKQLPAEIGELCNL
ITLDVAHNQLEHLPKEIGNCTQITNLDLQHNELLDLPETIGNLASINRLGLRYNRLSAIP
KSLAKCRELEELNLENNNISVLPEGLLSSLLNLTSLTLARNCFQSYPVGGPSQFSTIYTL
NMEHNRINKIPFGIFSRAKVLSKLNMKDNQLTALPLDFGTWTSMVELNLATNQLNKIPED
ICGLMSLEVLILSNNLLKKLPHGIGSLRKLRELDLEENKLECLPHEIAYLKDLQKLVLTN
NQLTTLPRGIGHLTNLTHLGLGENLLQHLPEEIGTLENLEELYLNDNPHLHSLPFELALC
SKLSIMSIENCPLTHLPAQIVAGGPSFIIQFLKMQGPYRAMV
NT seq
1749 nt
NT seq
+upstream
nt +downstream
nt
atgagtagtactttaggcaaagacaaagattcaaaagaaaaggaccccaaaagcggtccg
gtgggtaaagaaagggaaaaagaggccaagactttatccagcttagtcaaagatggtggc
aaagaaacaaagaccaaagggaaagatgccaaagaaggaaagaaggacacgagcagctcg
acgccgggtgttgccttctccgttgacaatacgataaagcggccaaacccagcaccaggt
acacgcaagaaatccagcaatgcggaggtcatcaaggagctcaataaatgtcgggaggag
aactctacgaggctggacctgtccaagcggtccattcacatgctgcccaccgctattaag
gagttgactcagttgacagaactctatttatacagcaacaagctgcagagcctaccggcg
gagctgggctgtctgtcggagctggtcactctagccctcagtgagaactccctgaccagt
ctgcccgactccctggactcgctgaagatgctccggatgctcgacctccggcacaacaaa
ctccgagagataccgcccgtcgtctaccggctgacgtctctgaccacgctgtacctgcgc
ttcaaccgcatcaccacggtggagaaggacatccgcaacctgtccaagctcaccatgctg
agcatccgggagaacaagattaaacagctaccagcagaaataggggagctctgcaacctc
attactctggatgttgcccataatcagttggaacatctaccaaaggagattggaaattgc
acacaaataaccaaccttgacctgcagcacaacgagctcttggacctcccagagactata
ggcaatttggcaagcataaatcgtttaggactgcgatataaccgattatcagcaatccct
aagtcgttagccaaatgtcgagagctggaggagcttaacctcgaaaacaacaacatttca
gtattgccagagggcctgctgtcgagtttgctaaatttgacgagtctcacacttgcgagg
aactgcttccagtcgtaccctgtgggcggaccctcccagttctccaccatctacaccctg
aacatggagcacaaccgtatcaacaagatcccattcggtatcttctccagggccaaagtg
ttgagcaagcttaacatgaaggacaaccagctaacggcgctgccgttggatttcggtaca
tggactagcatggttgaacttaacctggccactaatcagctgaataaaatcccagaagac
atctgtgggcttatgtctctagaggtattaatactttccaataatcttctgaagaagcta
ccacacggtattggaagtttgagaaagttacgagaacttgacttggaggaaaacaagcta
gagtgtctaccacatgaaatcgcttaccttaaagatttacagaaattggtgttgactaat
aatcagctgactacgttaccaagaggcatcggtcacctcaccaacctgactcaccttggt
ttgggagagaacctgctgcaacaccttcctgaggagattggcacactggagaatctggag
gaactgtacctcaacgacaacccccacctgcacagcctcccgtttgagctggccctctgc
agcaagctgtccatcatgagcatcgagaactgtcccctcacccacctgccggcccagatc
gttgcgggaggcccttctttcatcattcagttcctaaagatgcagggaccataccgtgcc
atggtctga
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