Poecilia mexicana (shortfin molly): 106916455
Help
Entry
106916455 CDS
T08022
Symbol
prpf38b
Name
(RefSeq) pre-mRNA-splicing factor 38B
KO
K12850
pre-mRNA-splicing factor 38B
Organism
pmei
Poecilia mexicana (shortfin molly)
Pathway
pmei03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pmei00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
106916455 (prpf38b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pmei03041
]
106916455 (prpf38b)
Spliceosome [BR:
pmei03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
106916455 (prpf38b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PRP38
Motif
Other DBs
NCBI-GeneID:
106916455
NCBI-ProteinID:
XP_014840248
Ensembl:
ENSPMEG00000004807
LinkDB
All DBs
Position
Unknown
AA seq
463 aa
AA seq
DB search
MANVGNQLPTQAVSKPPSGKHGNVLPLWGNEKTMNLNPMILTNVLSSPYFKVQLYELKTY
HEVVDEIYFKVTHIEPWEKGSRKTAGQTGMCGGVRGVGTGGIVSTAFCLLYKLFTLKLTR
KQVMGLITHTDSPYIRALGFMYIRYTQPPTDLLDWYNDFLDDEEELDVKAGGGCVMTIGE
MLRSFLTKLEWFSTLFPRIPVPVQKAIDQQMKARPRKVAQKEPEEEAEFTESGRQGERRR
SRTPRRTPSPKRSPKRSRSRSHHRERDRHGPSFDRELERERDRQRKERDGGRDRERDRAD
RGDRERRRSRSADRNRERKRSLSGSRERRGERREKERDGAEDRSRKKDRDHHKDRGMERD
RSRDRKSRAENDERRHKEDRDRHREDRKAKRSSRSRSRERRHKGGAEEKSRKRDRSHSRE
RERERDGERSHKRSRSKERSRHQRESSNEPSKHGERRRSQSTE
NT seq
1392 nt
NT seq
+upstream
nt +downstream
nt
atggctaacgtcggaaaccaactaccaacgcaggccgttagcaagcctccatcaggaaaa
catggcaacgtattgcccctatggggaaacgaaaagactatgaacctaaatccaatgatt
cttacgaatgtgctctcctcgccgtatttcaaagttcagctgtatgaactaaagacctac
catgaagttgtggacgaaatctatttcaaggtgactcacattgagccctgggaaaaggga
agcagaaagactgcgggccagaccggaatgtgcggaggggtgcgtggagttggcactggt
ggcattgtatcaactgctttctgtcttctttacaaactgtttactctcaagctaacacgc
aaacaggtgatgggtctcatcactcacacagactctccgtacatcagggcacttggattc
atgtacataagatacactcagcctccaacagatttattagactggtataatgacttcctg
gatgatgaggaggagcttgacgtaaaagcaggcggcggctgtgtcatgaccattggggag
atgctgcgttccttcctgaccaagctggaatggttctccacgctgtttcccagaatccct
gtgcccgttcaaaaggcgattgatcagcagatgaaagcgaggccacgtaaggtggcccag
aaggagccggaggaggaggctgagttcacagaatcaggaaggcaaggagaacgacgacgc
tccaggacgccgagacggacgccgagtcccaaaaggtctcccaagcgatcgagaagcagg
agccaccaccgggagagagaccggcacgggccgagcttcgaccgggagctggagagggag
cgggaccggcagaggaaggagagggacggggggcgggacagagagcgggacagggcagac
agaggggacagggaaagacggagatcacgtagcgcagacaggaacagagagcgcaaaaga
agcctcagcggcagcagagagcggcgaggcgaacgcagggagaaagagagggacggggca
gaagacagaagcaggaagaaagacagggatcaccacaaggacagagggatggagagggac
aggtccagagacaggaagagcagggcggagaacgacgagcggcggcataaagaagacagg
gacagacacagggaggacagaaaggccaaacggtcgagtcggagcagaagcagagaaagg
aggcataaaggaggagcggaggagaagagcaggaagagagatcgcagccacagcagagag
agggagcgcgagcgggacggggagcgctcccacaaacgcagccgcagcaaagagaggagt
cgccaccagcgggagtccagtaacgagcccagcaaacacggtgaacggaggagaagtcag
agtacggagtaa
DBGET
integrated database retrieval system