Poecilia mexicana (shortfin molly): 106916789
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Entry
106916789 CDS
T08022
Name
(RefSeq) PDZ and LIM domain protein 5-like isoform X1
KO
K19867
PDZ and LIM domain protein 5/6/7
Organism
pmei
Poecilia mexicana (shortfin molly)
Pathway
pmei04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
pmei00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
106916789
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
pmei04990
]
106916789
Domain-containing proteins not elsewhere classified [BR:
pmei04990
]
LIM domain-containing proteins
PDZ-LIM family proteins
106916789
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LIM
PDZ
DUF4749
PDZ_6
zf-C3HC4_3
Motif
Other DBs
NCBI-GeneID:
106916789
NCBI-ProteinID:
XP_014840799
Ensembl:
ENSPMEG00000014169
LinkDB
All DBs
Position
Unknown
AA seq
591 aa
AA seq
DB search
MSGNYSVTLLGPAPWGFRLQGGKDFNMPLTISRLSDGGKAAKGGVAVGDTVLSIDGVSTE
GMNHLEAQNKIKNCTGNLSLTLQKSSVSKPPPVAPKDNRTDLIKPVAISHPSVSQHPQSQ
CSAPHNKTPRPYGGCSSEGVYSPSQSPFTTFIPSPSSAFTPASSHIGPAPPPPLPPGFPS
PPLISFPSSASSSSSHPVLVAPQPSVYNTPINLYSTENACEVAMGQRRGLLESQGGALPQ
FNGGPQNTLKKPLRLPPSIPRKHVVDTDIHFYHVPSHADASRKRIMEDTEDWRPRTGTTQ
SRSFRILAQITGTENVQNEEADASKKTIEEDEESQLTSHESAVVKTMMKGTASNHGQGVQ
SGLITPSFGMKGNGSASVLRGPVPARPVPQPHPKDEDTLVQMAEHIPAGMRTPMCANCNM
VIRGPFLVAMGKSWHKEEFNCVHCRTSLADIGFVEEKGSVYCEHCYEEFFAPTCSRCQAK
ILGEVINALKQTWHIYCFMCAACQQPIRNNTFHLEDGEPYCEQDFYSLFGTGCHGCEFPI
EAGDKFLEALGYNWHDTCFVCVVCCASLEGQTFFSKKDKPLCKKHAHTVKI
NT seq
1776 nt
NT seq
+upstream
nt +downstream
nt
atgagcgggaactacagtgtcactctgttggggccggccccttggggtttcaggctccaa
ggagggaaggactttaacatgcccctcaccatctccaggctgtcggatggtgggaaagca
gcaaaaggtggtgttgcagtcggagacacggttctctccatcgacggtgtttccacagag
ggcatgaaccaccttgaggcccaaaacaaaatcaagaactgcacagggaaccttagtctc
actctgcagaagtccagtgtttctaagccccctccagtggcaccaaaggacaaccgaaca
gacctcataaaaccagtagccatcagccatccctctgtttcacaacatccccagtctcag
tgctctgcccctcacaacaaaacccccagaccttatgggggctgcagctctgagggtgta
tactctccttcacagtcacctttcaccaccttcatcccttccccatcctctgccttcact
cctgcctcatcccacattggtcctgcccctcctcctcctcttcctccaggtttcccttct
cctcctttgatctctttcccgtcctctgcatcctcttcctcctcccaccctgtcctggtt
gcgcctcagccatcagtgtataacacaccgatcaacctctactcaactgaaaatgcgtgt
gaggtggccatggggcaaaggcggggcctgttggagagtcagggaggagccttaccacag
tttaatggtggacctcaaaatactttaaaaaaacctctgcgtctgcctccaagtattccc
aggaaacatgttgtggacacagacatccatttttaccatgtgccttctcacgctgatgcc
agcagaaagcgcataatggaggacacagaggactggcgtccacgcacgggcaccacccag
tcccgatctttcaggattctggctcagatcacaggcacagagaacgttcaaaatgaagaa
gctgatgcatcaaagaagacaattgaagaggatgaggagtcacagcttacctcccatgaa
tctgctgttgtaaaaactatgatgaaaggaactgcttcaaaccacggacaaggagtacag
agtggtttgatcactccatcttttggaatgaagggtaatgggagtgccagtgtcctcagg
ggtcctgttccagcccgaccagtgcctcaaccccaccccaaagatgaggacactctggtc
cagatggcagaacacattcctgctgggatgcgaacccccatgtgtgccaactgcaacatg
gtgatcagaggaccatttttggttgctatgggaaaatcatggcacaaggaggaatttaac
tgtgtccactgccgtacatctctggcagacataggctttgtggaagaaaaaggctctgtg
tattgtgaacactgctatgaagagttttttgcaccaacctgcagccgctgccaggccaag
atattgggggaggtaatcaatgccctgaaacaaacatggcacatctattgcttcatgtgt
gctgcctgtcagcagccaatcaggaacaacacctttcacctggaggatggggaaccttat
tgtgagcaagacttttacagtttgtttgggactggttgccatggctgcgagttccctatt
gaggctggagacaaatttctggaggcactcggttacaactggcacgacacctgctttgtt
tgtgttgtgtgttgtgcctctctggagggtcagacctttttctccaaaaaggacaaacct
ctttgcaagaaacatgctcacacagtgaagatatga
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