Poecilia mexicana (shortfin molly): 106917020 Help Entry 106917020         CDS       T08022                                  Symbol col17a1 Name (RefSeq) collagen alpha-1(XVII) chain   KO K07603   collagen type XVII alpha Organism pmei  Poecilia mexicana (shortfin molly) Pathway pmei04382   Cornified envelope formation Brite KEGG Orthology (KO) [BR:pmei00001]  09150 Organismal Systems   09158 Development and regeneration    04382 Cornified envelope formation     106917020 (col17a1) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  Collagen Motif Other DBs NCBI-GeneID:  106917020 NCBI-ProteinID:  XP_014841164 LinkDB All DBs Position Unknown AA seq 1519 aa AA seqDB search MDKVTAVKVVSSGGGAAASSSSGVVKKSVTTCGVTSQSDFSFSSSGSGGKVAAGGSEGTN SSVLIKSSRSGAGNVRVTTVGTSSAQSSGQRSGASGTSGATVASGRGVRSKEAGGAGGAG GGSSSMSYSFGSGSRETKKEGGLGAVTVSTVTKSSYTSGGSREGKKGSSSSGITYSPPPK ERKSVTTMAAALSDVFDESSDSSLEYTRKEYGSSTATSTSATRGRTQSRESEIRARLQSA SPPARWTELDDVKRLLRGNRSTSTSPTQSPNNTLPIPKKASVEAKATSEGSSGPIDQYGS VWSGDVSSRYYSTNPNNYTATSHLYPSGAGVQNNLTLGSPSVNAGQAVSGSVPVYGVQNN LTSPTVLSPPGASSQIVYGVQKNVSGLTAPTVRPSSPTSYEASGKDFNFVLIEKENAPIK KETERLVMAKDTGKQFVSTGPATYSGTYSEDSLMREKQKLLSSAVDEGTDAKSSTLKSTT KDKATYAEIRKDELGFGFCSCCSWWKWLLALVCTLLLLLGLLFGLITLGEEVRRLKNRVD ALEAAPGSASTSRLRSSSGINIIDPPDSAYIERTSSGSTLTRSDNSINLGPGGGTGTGPG QDNGALQRTVQQLLRTELQSNAMRETLAYSLKGEKGDPGPKGDPGALGQKGDSGFPGLPG PPGQIGHSGLDGPRGPKGNPGEPGPEGQPGQRGREGPMGPRGESGPPGVGEKGDKGSQGE PGRPGPAGGPGPMGPKGAAGEQGVSGVPGVPGPKGFQGEAGPSGAKGDRGAPGVPGIKGD NGERGPRGPVGEPGTPGPQGPSGPKGSKGSGGESGSIGLPGARGLPGLPGDVGPQGPPGI QGPPGVAGIPGQPGGKGEPGSPGKVIGPVNSDTVAIPGPPGPAGPPGSAGSPGLSGPIGP AGVPGQPGTKGERGDKGDKGDQGQRGEPGTGLPGPPGLPGSRGEPGPQGPPGEGKQGPPG RRGPPGDPGVGNPGPRGEKGEPGSFLPTSETFFAGPPGPPGPPGKEGAQGFQGEPGQPGL PGSPGEPGFPGPPGPPGGPVRAGGEPESSFIPGPPGPPGPPGPPGSESPAVGQYIADYLQ SDSIRQYLAGPPGPPGPPGEPGSPGVSEDALVDNVASRVISYIQSSGPGAPGPPGPPGSV SVNDIISLLQRDEVRVYLMGPPGPPGPPGGPGIGGFSINPHEVAERVYGLLNQRGALGAP GAPGPPGPPGPPGNLLATGFQSLIGPPGPPGAQGVPGPQGPPGPPGPPGFGSYVNSDIRD YLQSVSLRGPPGPPGPPGPEGPPGPIGRMVSFTDHHNRDMLKPERQDYVRPEFDGGDGLS RPMFGPPGLPGPPGPPGHKGEPGLGSSTEWGPNSINLSIMAERLTDYIKAHGVLDGIVEN YNSRIFQGPPGPPGPPGPAWFGSHGNATNIMEIIEVVRQQSHHGPAVHGPRGPPGPPGPP GESRLFGSHTNVVDIMDYIKAHGMIVGPPGRPGPKGDQGLPGLTGAKGERGYPGPQGYGG PKGDRGDLLLTRKRRSSGV NT seq 4560 nt NT seq  +upstreamnt  +downstreamnt atggacaaggtgaccgcagtgaaggtggtgagctcaggtggaggagctgcagccagcagc agctcaggtgtggtcaaaaaatcagtgacaacctgtggagttacatcacagagtgatttt tctttcagctccagtggctcaggtggaaaagttgcagcaggagggtcggagggtacgaac agctcagttctgatcaaatctagcagatctggagccggaaacgtacgcgtcaccaccgta ggaacttcctctgcccagtcctcaggtcagaggtcaggggcctcagggacctcaggggcc actgtggcctcagggagaggagtgcggtctaaagaggccggaggagcaggaggagcagga ggagggtcctctagcatgtcctacagttttggaagtggaagcagagaaactaaaaaagaa gggggtcttggtgctgtgaccgtttccacggtgaccaaaagcagctacacatcaggaggg tccagagaagggaagaagggctcgtcatcctctggcattacgtactcacctcctccaaag gagaggaagagtgtgaccaccatggcagctgctctgtcagacgtctttgacgaaagctcc gattcttccctggagtacaccaggaaggagtatgggagttcaactgcaacttcaacttca gccactagggggagaactcaaagcagagagagtgagatcagagccaggcttcaaagtgct tcacctccagccagatggacggagctggatgatgtgaagcgcctgctgaggggaaaccgc tccaccagcaccagccccacccagtcccccaacaacacactgcccatccccaagaaggcc agtgtggaagccaaggccacatctgagggctcctcaggtcccatcgatcagtacggcagc gtttggtcaggagacgtgagcagtagatattacagcaccaaccccaacaactacaccgct acctcccacctttacccgtcaggtgctggagtccagaacaacctgactctcggctctccc tctgtgaatgccggacaagctgtcagcggctccgtgccagtatacggtgtgcagaataac ctgaccagtccaacggtcctctcaccccctggtgccagctcacagatagtttatggcgtc cagaaaaatgtgtctggactaactgcacccacagtgagacccagcagtcccaccagttat gaggcctcagggaaagacttcaactttgtgctgatagagaaggagaacgctcccatcaag aaggagacggagcggctggtcatggccaaagacaccgggaagcagtttgtgtccactggg cctgccacttactcaggcacttactctgaggactcgctgatgagggagaaacagaaactt ttgtccagcgcagtggatgaaggaactgatgccaaatcttcaaccttgaaatctaccaca aaagacaaagcaacctatgcagagatccgtaaagacgagttgggttttgggttctgctcc tgctgcagctggtggaagtggctgctggccctcgtctgcaccctgctgctcctcctgggg ctcctcttcggactcatcactttgggcgaggaggtgagacgtctgaagaaccgtgttgat gctctggaagccgcccctggcagtgcatcaaccagccgcctgaggtcttcctccggcatc aacatcatcgacccgcctgactcagcatacattgaaagaacctcttctggttccaccctc acccgctccgataattcaatcaacctcgggcctggaggaggcacaggaaccggaccagga caggacaacggcgccctgcagaggaccgttcagcagctgctcaggaccgaactacaatca aatgctatgagagaaactcttgcttattctctaaaaggagagaagggagatccaggacct aaaggtgatccaggggcacttggacaaaaaggtgatagtggttttcctggactgccaggt cctcctggacagattggacactcaggactggatggaccaaggggaccaaagggaaatcca ggtgaaccaggtccagaaggacaaccaggccagaggggacgggagggaccaatgggcccc cggggggagtctggaccgcctggtgttggagagaaaggagataaaggttctcagggtgaa ccaggacgtcctggtcctgctggaggtcctggacccatgggtccaaaaggtgctgctgga gagcagggtgtctctggagtcccaggtgtacctggtccaaagggattccaaggcgaagct ggaccgtctggagccaaaggtgaccgtggagcaccaggtgttccgggaattaaaggggac aatggagaaagaggacctcgtggaccagtgggtgaaccaggaactcctggacctcaaggc ccatctggaccaaagggatctaaaggaagtggcggtgaatcgggttcaataggacttcct ggtgctagaggtttaccgggtctccctggtgacgttggtccccaaggtcctcctggaatc caaggacccccaggcgttgcaggaattccaggccagcccggtggtaaaggtgaaccagga tctcctggtaaagtcatcggcccggtaaactctgacactgtggccattcctggacctcca ggaccagctggacctccaggttctgctgggtccccaggtttgtctggtcccattggtcct gctggagtcccaggccaaccaggtacaaagggagaacgaggggataagggagacaagggg gaccaaggtcaacgtggagagccaggcaccggccttcctggacccccagggctcccaggg tcccgaggtgaacctggacctcaggggcctcctggtgagggtaagcaggggcccccaggc cgcagaggccctcctggagatccaggtgttggaaatcctggacctcggggagagaaagga gagcctggcagcttcttgccaacatctgaaaccttctttgcgggaccaccaggacctcca ggtccacctggtaaagaaggagcacaaggattccaaggtgaaccaggtcagccggggctt ccagggagtccaggggagccagggttcccaggacctccaggacctccaggtggcccagta agggcaggaggggaacctgaaagctcattcattcccggaccacctggaccaccgggacca ccaggaccacctgggagtgaatcacctgctgttggccagtacattgctgactacctccag agtgacagcatcagacagtacttggctggacctcctggacctcccggacctcctggagaa ccaggctctcctggtgtttcagaagatgcccttgtggataacgtagccagtcgagtaatc tcctacatccagagttctggcccgggggcgcctggtcctcctggcccacctggatccgtc tctgtcaatgacatcatcagtctactgcagcgagacgaagtgagggtatatcttatgggt ccacctggcccaccaggacctcctggaggtccaggtatcggcggcttctcgattaacccc catgaggtggctgaacgtgtctacggcctcttgaatcagagaggggcgctgggtgcacct ggagctccaggaccccctgggcctccagggcctcctggtaacctgctggcaactgggttt cagtctctcatcggtcctccaggaccccctggtgcacagggtgttcctggaccacagggt ccgcctggcccccctggaccaccaggatttgggagctacgtcaactcggacatccgtgac tacctgcagagcgtttccctcagaggccctccaggccctccggggccccctggaccagag ggccctcctggtccaatcggacgaatggtttcctttacagaccatcacaacagagacatg ctgaagcctgaaagacaagattatgtccggcctgagtttgatggtggtgatggtttgagt cgacccatgtttggaccccctggtctaccggggccccctggacctccaggacacaaggga gagccaggtttgggcagtagcaccgagtggggcccaaactctattaacttatccatcatg gctgaaagattgactgattacatcaaagctcacggcgttctggacggcatcgttgagaac tacaacagcaggatcttccaaggtcctccagggccaccggggcctccaggccccgcctgg tttggttcccatggaaacgccacaaatattatggaaattattgaagtcgttaggcagcag agccaccatggacctgccgtccacgggccccggggtccacccggccccccaggtccacca ggagagagccgactgtttggttctcacaccaacgttgttgacataatggactacatcaaa gcacatggaatgattgtgggaccaccagggagaccgggaccgaaaggggaccaaggactt ccaggactaacaggagcaaaaggtgaacgaggttatcctgggcctcagggatacggagga ccaaagggtgacagaggagatttattgctgacaagaaaaaggagaagctctggtgtttga

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