Poecilia mexicana (shortfin molly): 106917271
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Entry
106917271 CDS
T08022
Name
(RefSeq) pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15-like
KO
K12820
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15/PRP43 [EC:
5.6.2.6
]
Organism
pmei
Poecilia mexicana (shortfin molly)
Pathway
pmei03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pmei00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
106917271
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pmei03041
]
106917271
03009 Ribosome biogenesis [BR:
pmei03009
]
106917271
Enzymes [BR:
pmei01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
106917271
Spliceosome [BR:
pmei03041
]
Complex A
U2 snRNP components
U2 related factors
106917271
Complex B
106917271
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
106917271
Ribosome biogenesis [BR:
pmei03009
]
Eukaryotic type
90S particles
Helicases
106917271
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
HA2_N
Helicase_C
Motif
Other DBs
NCBI-GeneID:
106917271
NCBI-ProteinID:
XP_014841577
LinkDB
All DBs
Position
Unknown
AA seq
409 aa
AA seq
DB search
QSSQIQPLRSHRSFRTPRVDHLNHVSSCSQVVVSTNIAETSLTIDGVVFVIDPGFAKQKV
YNPRIRVESLLVTAISKASAQQRAGRAGRTRPGKCFRLYTEKAYRTEMQDNTYPEILRSN
LGSVVLQLKKLGIDDLVHFDFMDPPAPETLMRALELLNYLAALNDNGDLTELGSMMAEFP
LDPQLAKMVIASCEFNCSNEILSITAMLSVPQCFVRPTEAKKVADDAKMRFAHIDGDHMT
LLNVYHAFKQNHESTQWCYDNFVNYRSLMSADNVRQQLSRIMDRFSLPRNSGDFNGRDYY
LNIRQALVTGFFMQVAHLERTGHYLTAKDNQVVQLHPSTVLDHKPEWVLYNEFVLTTKNY
IRTCTDVKPEWLVKIAPQYYEMSNFPQCEAKRQLEHIIAKLSSKEYTQY
NT seq
1231 nt
NT seq
+upstream
nt +downstream
nt
tcagtcgagccagatccaacctctgagatcccatcggtctttccggacgcctcgggtgga
tcatttaaatcatgtgtcctcatgttcgcaggtcgtcgtgtcaacaaacatcgccgagac
gtccctgaccatcgacggagtggtgtttgtaattgatcccggatttgccaagcaaaaggt
gtacaacccacgcatcagagtggaatcccttctggtcaccgccatcagcaaggcctcggc
tcagcagagagcgggtcgcgccggacggacgcgcccgggaaaatgtttccgcttgtacac
ggagaaagcctacaggacagaaatgcaggacaacacatatccagagatcctgaggtctaa
tcttggctccgtggtgctgcagctgaagaaactgggcatcgacgatcttgtgcactttga
cttcatggaccctccagccccggagaccctgatgcgagcgctggagctgctgaactacct
ggcagcgctcaacgacaacggcgacctgaccgagctgggctccatgatggcggagttccc
cctggacccgcagctcgccaagatggtcatcgccagctgcgaattcaactgctccaacga
gatcctctccatcaccgccatgctgtcagtcccacagtgcttcgttcgacccacggaggc
caagaaggtggccgatgatgccaagatgcgctttgcccacatcgacggagaccacatgac
gttactcaacgtttaccatgcctttaagcagaaccacgagtccacccagtggtgctacga
taactttgtgaactaccgctcgctgatgtcagcggacaacgtccggcagcagctgtcgag
gatcatggatcgcttcagcctgccaagaaacagcggcgatttcaacggcagagactatta
tctcaacatccgacaagcgctggtcaccggcttcttcatgcaggttgctcaccttgagcg
caccggccattacctgacggcaaaggacaaccaggtggtgcagctgcacccctccactgt
gcttgaccacaaacctgagtgggtgctctacaacgagttcgtcctcaccaccaagaacta
catccgcacctgcacagacgtcaagcccgagtggctggtgaaaattgccccgcagtacta
cgagatgagtaacttccctcagtgtgaagcaaaaagacagttggagcatattattgcaaa
actctcatccaaggaatacactcagtactaa
DBGET
integrated database retrieval system
