Poecilia mexicana (shortfin molly): 106917894
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Entry
106917894 CDS
T08022
Symbol
itga10
Name
(RefSeq) integrin alpha-10
KO
K06586
integrin alpha 10
Organism
pmei
Poecilia mexicana (shortfin molly)
Pathway
pmei04510
Focal adhesion
pmei04512
ECM-receptor interaction
pmei04810
Regulation of actin cytoskeleton
pmei04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
pmei00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
106917894 (itga10)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
106917894 (itga10)
09142 Cell motility
04820 Cytoskeleton in muscle cells
106917894 (itga10)
04810 Regulation of actin cytoskeleton
106917894 (itga10)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
pmei04515
]
106917894 (itga10)
Cell adhesion molecules [BR:
pmei04515
]
Integrins
Integrin alpha subunits
106917894 (itga10)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
VWA
FG-GAP
Integrin_A_Ig_2
Integrin_A_Ig_1
VWA_2
FG-GAP_3
Integrin_A_Ig_3
FG-GAP_2
vWA_SIBA-E
ITGAX-like_Ig_3
Motif
Other DBs
NCBI-GeneID:
106917894
NCBI-ProteinID:
XP_014842679
LinkDB
All DBs
Position
Unknown
AA seq
1168 aa
AA seq
DB search
MELRKYLLCLEFILLLKGLCRCFNIDVKHPRVFTGPEDAQFGFSVLQHEAEGEKSMLVGA
PWDGPPNNRKGDVYKCVVGEEKNSNCSKVNLGETALRNVSKNLRNSHLGMTLTPDSPDGF
LACAPLWSQECGTSMFSTGICASVGDDLEPRGTIAPTEQKCQTFMDIVIVVDGSNSIYPW
YEVQNFLSNILSKFHISSDQMQVGILQYAEVAVHEWSLKDYQTTQEVVEAAKNISRQEGR
ETRTAYAIQMACTEAFSAERGAREGATKVMIVVTDGESHDGDELPDALEECESRNITRYA
IAVLGYYIRKQQDPETFINEIKYIASDPDDKYFFNVTDEAALNDIVDALGDRIFTLEGAL
GYNQSTFHMEMSQIGFSTHTLDDGILFGIVGAYDWDGGVLKEGTNGVIIPPREAFESEFP
LELKNHAAYLGYTVSSVVIGDWRRLYVAGAPRFKHKGKVVLFELHENGYVDIVQALNGEQ
IGSYYGSELCGLDIDKDGITDVLLVAAPMYLGSGNKEAGKVYIYTLNGEGKFISNGTLKS
DNKSQDARFGYSLAAAPDLNHDGFTDVVVGAPLEDEHRGAIYVYHGYDIYIIHDCKQHIL
GSSLSPSLQYFGRSVSARLDLDGDELIDLAVGAQGRAVLLSSRSIVQINVSLSFQPHSIN
VIQKTCQRGGRESACLNATACFTAVSRSPGPHSNAFDLWVSAMLDDRKFSARALFDDSSH
RQMQLPVRAQTRKTLCYKLPFHVYDTADYIRPISFSLRFKINDTETGPVLDEGWPTSVKK
SIPFFKDCGEDDVCTTDLVLQAHLDISGTRQKPYVIRSPRRRLAVEVQLENRLENAYNTS
LKLHYSRNLHFSSISIKENANFKIECTALGSNSHSCNVSYPVFRSHSKVNFMLEFEFSCT
SLHNRVQMKLSATSDSSEREETLGDNSVQLQTFVQYEPDLFVSSESNLNRYEVHPTRTAS
EAMGPEFYTYIRLLNVGCYSVSNLELRVLLPSVAAEDAAFMTVTDVFTYNATGIKCGVLS
DVTQLKPRQKDVRPLHPENMMHDEILNCSRSWCTEVVCEVQQLGQQAVIRISRRVHDDFF
RKVKYKSVRIISAYSLSAQETNLITLGAGTVQGETVLEVLKGRAIPISLWILIGSIIGGL
LLLALIIFILWKLGFFTRKHREDENQED
NT seq
3507 nt
NT seq
+upstream
nt +downstream
nt
atggagctgcgcaaatacctgttgtgcctggagtttattctccttctgaaagggttgtgt
cggtgtttcaacatagacgtgaaacatcctcgcgtcttcaccggcccggaggacgcccag
tttggcttctctgtcctacagcatgaagcagaaggagagaaatcgatgctggttggagct
ccgtgggatgggccgcccaacaacaggaaaggagacgtctataaatgtgttgtgggggag
gagaaaaactcaaactgtagcaaagtaaacctcggtgaaactgctcttcgtaacgtttct
aaaaacctgaggaactctcacctgggaatgaccctcacaccggactcacctgacggattt
ttggcgtgtgcccctctgtggtcgcaggagtgtgggacatcgatgttcagcaccggcatc
tgcgcctctgttggcgatgacttggaaccgagaggcaccatcgctccaaccgagcaaaag
tgtcagaccttcatggacatcgtgattgttgtggacggctcgaacagcatctatccctgg
tatgaagtccagaacttcctcagcaacattctcagcaagttccacatcagctcggaccag
atgcaggttggtatactgcagtacgcagaagtagcagtccatgagtggtctctgaaggac
taccagaccacacaggaggtggtggaggccgccaaaaacatcagccgacaggagggacga
gagacacgcactgcatacgccatccaaatggcctgcacagaggcattcagcgctgagcgc
ggagccagggagggcgccaccaaggtgatgattgtggtcacagacggggagtcgcacgac
ggggacgagctgccagacgctctggaggaatgcgaaagcagaaacatcaccagatacgcc
atcgctgttctggggtactacatccgcaaacagcaggatccagagaccttcattaatgag
atcaaatacatcgccagcgacccggacgacaagtactttttcaacgtgaccgatgaagct
gcactgaatgacattgtggacgctctcggagatcggattttcactcttgaaggtgccctg
ggctacaaccaaagcacgttccacatggagatgtctcagatcggtttctcaacgcacaca
ctggatgatggcattctgtttgggattgtgggcgcctacgactgggacggaggggtgctg
aaggaagggaccaatggagtaattatcccccccagagaagccttcgaaagtgaatttcca
ttggagctcaaaaatcacgctgcttatttaggatacaccgtgtcatctgtggtcattggc
gactggaggaggctgtacgtggctggggctcctcgatttaaacacaaaggcaaagtcgtt
ttgtttgaactccatgaaaacggctacgttgacatcgtgcaggctttgaacggagaacag
attggatcttactacggcagcgaactgtgcgggctggatatcgacaaagacggcatcact
gacgtccttttggtcgccgctcccatgtatctcggctcaggaaacaaggaagccggaaaa
gtctacatctacactctcaacggggagggaaaatttatatctaatgggactctgaaatca
gacaacaagtctcaggatgccaggtttggctattcactggcggctgctccagatctgaac
catgacggcttcactgacgtggtggttggagctccgctggaggatgagcacagaggggcc
atctatgtctaccacggatacgatatttacatcattcacgactgcaaacagcacatacta
gggtcgtccctctccccgtctctgcagtattttggccgcagtgtcagtgcacggttggac
ttggacggtgatgagctgatagatttggcagtgggagctcagggcagagccgtgctgctc
agctccagaagcatcgtccagatcaatgtgagtttgtccttccagccgcattccattaac
gtcattcagaagacgtgtcagaggggcggcagagagtcggcgtgcctcaacgccacagcc
tgcttcacggccgtttcacgctcacctggaccacacagcaatgcttttgatctttgggtg
tcagccatgttggatgacaggaagttttcagcgcgagctctgttcgatgacagctcccac
aggcagatgcagcttccagtgcgagcgcaaacaagaaaaactctctgctacaagctgcct
ttccatgtatatgatacagcagattatattcgccccatcagcttctcactgcggtttaag
atcaacgacacggagacaggtcccgtgttggatgaaggctggccaacaagcgtcaagaaa
tctataccatttttcaaagactgcggcgaagacgacgtttgcacaacagatctggtcttg
caggcacacctggacatctctggcacaaggcagaaaccttatgtgattcgcagccctcgt
aggcgtctggcggtggaggtgcagctcgagaacaggctggaaaatgcctacaacactagc
ctgaagctgcactactcgcgcaacctccacttctccagcatcagcatcaaagagaatgcc
aacttcaagatcgagtgtaccgctcttggctcaaacagccactcgtgtaacgtcagctac
ccagtgtttcgctctcattcgaaggtgaattttatgttggagtttgaattcagctgcacc
tctttgcacaatcgggtacaaatgaagctcagtgctaccagtgacagcagtgagagagag
gaaactctgggggacaacagcgttcagctgcagactttcgtacaatatgagccagatctg
tttgttagcagtgagtctaacctgaaccgctacgaggtccatcccacacggacagcatca
gaagccatgggtccagagttctacacgtacatcaggctgctgaacgtcggctgttactct
gtgagtaacctggagctgcgtgtgcttttgccctccgtggcagcagaagacgcggccttc
atgactgtgacggatgtcttcacgtacaacgccacaggaataaagtgcggagtgctgagt
gacgtaacccagttgaagcccagacagaaagacgttcgtccccttcatcccgagaacatg
atgcatgatgaaatactgaactgcagccggtcgtggtgcacggaggtcgtctgtgaggtg
cagcagctcggtcagcaggcggtgatacgaatcagccgcagagttcatgacgactttttc
agaaaagtcaaatataagtcagtgaggataattagcgcctacagtctctcggctcaggag
actaacctcatcactctgggagcaggaacagtccagggggagactgtcctggaggtgctg
aagggccgagctattcccatctcgctctggattttgatcggcagcatcataggcggcttg
ctgctactagcgctcattatattcatactgtggaagcttggattcttcacgcggaaacac
agagaggatgaaaaccaggaggactga
DBGET
integrated database retrieval system
