Poecilia mexicana (shortfin molly): 106917953
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Entry
106917953 CDS
T08022
Name
(RefSeq) calcium-activated potassium channel subunit alpha-1 isoform X1
KO
K04936
potassium large conductance calcium-activated channel subfamily M alpha member 1
Organism
pmei
Poecilia mexicana (shortfin molly)
Pathway
pmei04270
Vascular smooth muscle contraction
Brite
KEGG Orthology (KO) [BR:
pmei00001
]
09150 Organismal Systems
09153 Circulatory system
04270 Vascular smooth muscle contraction
106917953
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
pmei04040
]
106917953
Ion channels [BR:
pmei04040
]
Voltage-gated cation channels
Potassium channel, calcium- and sodium-activated (KCa/KNa)
106917953
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Slo-like_RCK
Slowpoke_C
BK_channel_a
Ion_trans
Ion_trans_2
TrkA_N
Motif
Other DBs
NCBI-GeneID:
106917953
NCBI-ProteinID:
XP_014842771
Ensembl:
ENSPMEG00000021340
LinkDB
All DBs
Position
Unknown
AA seq
1338 aa
AA seq
DB search
MLAEAHGTDPHGSDSSMRTSSIDNNNNPDSSILISKMEGVVIPYTSEVPCDDYGQRMWWA
FLASSMVTFFGGLFIILLWRTLKYLWTVCCHCNIKNKEAQKVNNPANNPTADKTTKGPDE
KEEAAASEVGWMTSVKDWAGVMISAQTLTGRVLVVLVFALSIGALGIYFIDSSDPIESCQ
NFYKDFTLQIDMAFNVFFLLYFGLRFIAANDKLWFWLEVNSVVDFFTVPPVFVSVYLNRS
WLGLRFLRALRLIQFSEILQFLNILKTSNSIKLVNLCSIFISTWLTAAGFIHLVENSGDP
WENFENSQSLSYWECVYLLMVTMSTVGYGDVYAKTTLGRLFMVFFILGGLAMFASYVPEI
IELIGNRKKYGGSYSAVNGRKHIVVCGHITLESVSNFLKDFLHKDRDDVNVEIVFLHNIS
PNLELEALFKRHFTQVEFYQGSVLNPHDLARVKIESADACLILANKYCADPDAEDASNIM
RVISIKNYHPKIRIITQMLQYHNKAHLLNIPSWNWKEGDDAICLAELKAGFIAQSCLAQG
LSTMLANLFSMRSFIEIEEDTWQKYYLEGVANEMYTEYLSSAFVGLSFPTVCELCYVKLK
LLLIAIEFKSEQRESRSRKRILINPGNHVKLQEGTLGFFIASDAKEVKRAFFYCKACHDD
ITDPKRIKKCGCKRQIYSKMSVYKRMKLACCFDCGRSERDCSCMSGSVHSNMDTLQRAYP
LSSVSVHDCATTLRAFSSAKYKYNGFVRSPADGTTTPRNSGSQKEAGVRFKADCNLVEDE
HPSTLSPKKKQRNGGMRNSPNCSPKMMSRHDPLLIPGNEQIENMDMNVKRYDSTGMFHWC
PSKEIEKVILTRSEASMTVLSGHVVVCIFGDVTSALVGLRNLVMPLRASNFHYHELKPIV
FVGSLDYLRREWETLHNFPKVSILPGTPLSRADLRAVNINLCDMCVILSANQNNIEDASL
QDKECILASLNIKSMQFDDSIGVLQANSQGFTPPGMDRSSPDSSPVHGFVRQASVTTGSN
IPIITELAKPGKLLPLVSLSQEKKSGTSIQMITELVNDSNVQFLDQDDDDDPDTELYLTQ
PFACGTAFAVSVLDSLMSATYFNDNILTLIRTLVTGGATPELEGLLAEENALRGGYSTPQ
TLANRDRCRVAQLALYDGPFADLGDGGCYGDLFCKALKTYNMLCFGIYRLRDAHLGTPSQ
CTKRYVITNPPYEFELVPTDLIFCLMQFDHNAGQSRTSLSHSSHSSHSSSKKSSSVHSVP
PSNRQNRSSKSREAREKQNATRMNRMGQEKKWFTDEPENAYPRNIQIKPMSTHMANQVNQ
YKSTSSLIPPIREVEDEC
NT seq
4017 nt
NT seq
+upstream
nt +downstream
nt
atgctagccgaggcacatggcacggatccccatggaagcgacagctctatgaggacaagc
agcatcgataataacaacaatccggactcttcgatcttaatatccaagatggaaggcgtt
gtcatcccctacacgtctgaggtgccatgcgacgactatggacagcgcatgtggtgggca
ttcctcgcctcctccatggtgacgtttttcgggggtctcttcatcatcctgctatggagg
accctgaagtatctgtggactgtctgctgccactgcaacataaaaaataaggaggctcag
aaggtgaataaccctgccaacaatccgacagcagacaagacaacaaaaggtcctgatgag
aaggaggaggcagcagccagcgaggtgggatggatgacttcagtcaaagactgggccggt
gtcatgatctccgctcagacactcacaggcagggttctggtggtgctagtctttgctctc
agcattggagccctcggaatatactttatagactcctcagatcctatagaatcctgccag
aacttctacaaagattttacactacaaatcgatatggccttcaacgtcttcttcctcctg
tactttggcttgcggtttatagcagccaatgacaagctgtggttctggctggaggtcaac
tcagtggtcgacttcttcaccgttcctcctgtgttcgtctctgtgtacctaaacagaagc
tggcttggtttaagatttctgagagcactaagactgattcagttctcagaaatattacag
ttcctaaatattttgaaaacaagcaattccatcaagctggtgaacttgtgctccatcttt
ataagcacgtggctcacggcggctggatttatacatctggtggaaaactcaggggatccg
tgggaaaactttgaaaattcccagtcgctgtcttattgggaatgcgtctacttgctgatg
gtgacgatgtccacagtgggttacggggacgtctatgcaaaaaccaccctgggccgcctg
ttcatggtcttcttcatccttggtggtttggccatgtttgccagctacgtccctgaaatc
atagagttaataggaaaccgcaagaaatatggtggttcctatagtgcggttaatgggaga
aagcacattgtggtctgtggtcatattaccctcgaaagtgtctccaacttcctcaaagac
ttcctacacaaggacagggatgatgtcaatgtagaaattgtttttctccataatatttcc
cctaatcttgagctggaagccttgttcaaacgccattttactcaagtcgagttctaccag
ggatcggttctcaaccctcatgatttggcccgagtaaagatcgagtcagcggatgcctgt
ctgattttggccaacaagtattgtgcagatcctgatgctgaagacgcttctaacattatg
agggtcatatccatcaagaactatcatcccaagatcagaataataacacagatgctacag
tatcacaacaaggcccatctgctgaacattcccagctggaactggaaggaaggtgatgat
gctatatgcctggctgagctgaaggctggtttcattgcccagagctgtctggcccagggc
ctgtcgaccatgctggccaatctcttctccatgagatccttcattgagattgaggaggac
acatggcagaagtattacctagaaggagtggctaatgagatgtacacagagtatttgtcc
agtgccttcgtaggcctctccttccccactgtgtgcgagctgtgctatgtcaagttgaag
ctgttgcttattgccattgaattcaagtctgagcagagagagagcagaagccgaaagcgc
atcctcatcaatccaggcaaccacgtcaagttgcaggagggaacactgggattctttatt
gctagcgatgccaaagaagtaaagcgagcatttttctactgcaaagcttgtcacgatgac
atcacagaccccaaaaggatcaaaaagtgcggctgcaagcgacagatttattccaagatg
tccgtctacaaacgaatgaaactggcatgttgttttgattgcggccgttcagagcgagac
tgctcttgcatgtcaggcagtgtacatagtaacatggacacccttcagagggcctaccca
ctttcctctgtctctgttcatgattgcgcaaccactttacgtgccttctcctcagctaaa
tataagtataatggatttgtcagatcaccagcagatggcactacaacaccacggaacagt
ggaagccaaaaagaggctggcgttcgattcaaagctgattgcaatctagttgaggatgag
catccgtcgactctctcacccaaaaaaaagcagcgcaatggggggatgcgaaactcgccc
aactgctcgcccaaaatgatgagtcgacatgatcccctcctaattcctggaaatgaacaa
attgagaacatggacatgaacgtcaagaggtacgactcgacgggaatgtttcactggtgc
ccttccaaagaaatcgagaaagtcatcctgactcgaagcgaagcctccatgactgtgctg
agcggccatgtagtggtctgtatatttggggatgtcacgtccgctttggtggggctgcga
aacctggtgatgcctttaagagccagcaattttcactaccatgaactaaagcctatagtt
tttgtgggctcgctggattaccttcggagagagtgggagactttacacaacttccccaag
gtctccatcttacctggtacaccattaagtcgggcagatttaagggctgtcaacatcaac
ctctgtgacatgtgcgtaatactgtcagccaatcagaacaatatcgaagatgcctctctg
caggataaggaatgcatcttggcatcactcaacatcaagtctatgcagtttgatgacagc
attggggtcttacaggctaattcccaaggtttcacgcctcctggaatggacaggtcatct
ccagacagcagtccagtacatggctttgtgcgtcaggcttcggtaaccaccggatccaac
atccccatcatcacagagctagctaaacctggcaaactactgccattggtttctctcagt
caggaaaaaaaaagtggaaccagcatacaaatgataacagagctggtgaatgactcaaac
gttcagttcctggaccaagacgatgacgacgacccggacacggagctgtacctcactcag
cccttcgcctgcggcaccgccttcgctgtcagtgtactcgactccctgatgagtgcgaca
tacttcaacgataacatcctcacactaatccggacactagtcacgggaggagccacgcca
gagctggagggcctgctggctgaggagaacgctctcagaggaggctacagcacgccacag
acgctggccaacagagacaggtgtcgcgtcgcccagctggccctgtatgacggcccgttt
gctgacttaggggatggtggctgctacggcgacttgttctgtaaagccctgaaaacgtac
aacatgctgtgttttgggatctacagattaagagatgctcatctcggcacaccaagccag
tgcacaaaacgatatgtgatcacaaacccaccgtacgagtttgagctggtgcccaccgac
ctgatcttctgcctcatgcagtttgaccacaacgctggccagtcgcggacaagcttatcc
cactcttcccactcctcccattcctccagcaaaaagagttcctctgtgcactcggtgcct
ccctccaaccggcagaaccgcagcagtaagagcagagaggcgagggaaaaacagaatgca
acaaggatgaatagaatgggccaagaaaagaaatggtttacagatgaaccggaaaatgcc
tacccaaggaacattcagatcaagcccatgagcactcacatggccaaccaagtcaaccaa
tacaaatccaccagtagcctgattccaccaatcagagaagttgaagatgaatgctga
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