Poecilia mexicana (shortfin molly): 106917956
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Entry
106917956 CDS
T08022
Name
(RefSeq) protocadherin-11 X-linked-like isoform X1
KO
K16498
protocadherin delta 1
Organism
pmei
Poecilia mexicana (shortfin molly)
Pathway
pmei03273
Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:
pmei00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
106917956
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
pmei01009
]
106917956
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
pmei04515
]
106917956
Protein phosphatases and associated proteins [BR:
pmei01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
106917956
Cell adhesion molecules [BR:
pmei04515
]
Cadherins
Protocadherins
106917956
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Protocadherin
Cadherin_2
Cadherin_CELSR2_9th
TMEM154
DUF6249
DDE_3
Motif
Other DBs
NCBI-GeneID:
106917956
NCBI-ProteinID:
XP_014842821
LinkDB
All DBs
Position
Unknown
AA seq
1319 aa
AA seq
DB search
MNLASQVHVLVALLTCLVLLCKAQERDYIVKEEQQENVRIGNLRKDLDLNLDPNIRLSSP
LQFKPVYKTGDVPLVRVEANTGEIFTTNHRIDREKLCSGIFTEKRCYYEIEVAVLPDEIF
RLVKIRFLIEDVNDNAPLFQSTVINISIPENTAINTRYPVPSAFDPDVGINGIQHYELVK
SVNEFGLDIIETPEGDKWPQLIVQQNLDREQKDTFVMKIKVEDGGNPPKSSTAILQVTIS
DVNDNRPIFRDSELEVSVPENAPMGTSVAQLHATDADLGSNAQVHFSFSNQISSSTKRHF
AINSSTGLITVKQPLDREVTPVHKLIVLASDGSSTPSRATVIVNVTDVNDNVPSIDTRYI
INLVNGTVLLSENAPLNTKIALITVTDKDADLYGKVACYTDHDVPFRLKPVFNDQFLLET
AAPLDYETTREYAIKIVASDRGTPPLNTSAMVLIKIKDENDNAPIFPQPEFQLSIPENND
PLMQLIKISATDADSGHNAEIIYTLGPDAPDGFNIDRRSGILSVGKRLDREKQERYSFTV
IARDNGSAPLQSNVTVRLIVQDLNDNSPAFTHPEYNFYVPENLPLYGTVGLITVTDTDAG
DNAVITLSILNGKDNFIIDPQTGVIKPNITFDREQQSSYTFMVKAIDGGQPPSSSYAKVT
INVVDVNDNRPVFVIPSSNYSYDLVRTTTSPGSVVTRVFAIDNDTGMNAELQYSIISNII
ITSRVSPRGLFSIDKTTGNITLQEKIVLADQGLHRLVVKVKDLGQPESLHAIALVHLFVN
DTVSNSTFIQEQLRKSMETPLDRNIGDNEITPQANGYVIVVIAIIAGTMTVILVIFVTAL
VRCRQTPRHKVVQKGKQSGEWVSPNQENRQIKKKKKRKKRSPKSLLLNFVTIDESKPEDP
THEHVNGTLDLPVELEEQTMGKYNWATTPTTFKPDSPDLAKHYKSASPQPTFQIKPETPV
APKKHHVIQELPLDNTFVVGCDSLSKCSSTSSDPYSVSECGCQGGFKAAGQIATRQNPGQ
TPEKSFNSPPPICPHKLPDLNPVEHLWDVVEREICIRDVQSRNLPQLCDEACQLGKITSV
NLDSVVRTMKNLSSNSDFSDNYLLQTHRRVTFHLPDGSQESCSDSGLGDAEPSSTASATQ
PLPLSFPQEEYFEQASPNSRTEGDGNSDPESTIEVNLKKALAEASETCTQECLILGHSDS
CWMPPTLAQLQSPGSNSPTSTPTTTTITAALPSFGFQGVKANIGGMGVMDGRHTLGRSVP
KRDELDKGFTRPQFYNTLDRHCSSKKEDPVKVIPLASFSSPGQHTPTGGSSSFLHEHQL
NT seq
3960 nt
NT seq
+upstream
nt +downstream
nt
atgaacttggcaagtcaggtgcatgttctggtggccttgctcacctgtttggtcttatta
tgcaaggcccaggagagggactacatcgtgaaggaggagcagcaggagaacgttcgcatc
gggaatctgcgcaaggacctcgacctcaacctggaccccaacatcaggctgtcctctccg
ctgcagttcaagcctgtgtataagacgggcgacgtgcctttggtgagggtcgaggccaac
acgggggagattttcaccaccaatcacaggattgaccgggagaagctgtgctcggggatc
ttcacggagaaacgctgctactacgagatcgaggtggcggtgctgcccgacgagatcttt
cgattggttaagatccggttcctgattgaggatgtgaatgacaatgcgcccctcttccag
tccactgtaataaacatctccatccctgaaaacacagccatcaacacccgatacccagtg
ccatcagcgttcgaccctgatgtgggaattaatgggatccaacactacgagctggtcaag
agtgtcaatgagtttggcttagacatcattgagaccccggaaggtgacaagtggccacag
ctcattgttcagcagaatcttgatcgggagcaaaaggacacctttgtgatgaagatcaag
gtagaagatggtggcaacccccccaaatctagcactgccattctccaggttaccatttcc
gatgtcaacgacaatcgtcctatcttcagggacagtgagttggaagtctctgttccagaa
aatgctccgatggggacttctgtggctcagcttcacgccacagatgcagacctgggttcc
aatgcacaggtccatttttcattcagcaaccagatctcctcctcaaccaagcgtcatttt
gccatcaacagctctactggactgattactgtaaagcaacctctagatcgggaggtgact
cctgttcataaactcattgttctcgcaagtgatggcagctcaaccccatcaagagccaca
gtgattgtcaatgtcacagatgttaatgacaatgttccttccatagacactcgctacatt
atcaacctggtaaatggaactgttctactgtctgagaatgctcctctcaacaccaaaata
gcccttattactgttactgacaaggatgccgatctgtatggcaaagtggcttgctacact
gaccatgatgttcctttccggcttaagcctgtctttaatgatcagttcttactggagaca
gctgcccctctagattatgagaccactcgtgaatatgctattaagatagtggcctcggac
agaggaacgcctcctttgaacacttctgctatggtcttaattaaaatcaaggatgagaat
gacaatgcacccattttccctcagcctgaatttcaactgtcaataccagagaacaatgac
cccttaatgcagttaataaaaatcagtgccactgatgcagatagcggacacaatgctgag
attatttatactcttggccctgatgcaccggacgggtttaacatagacaggcgatcggga
attctctctgttgggaaacgtctggacagagagaagcaagagaggtactcattcactgtc
atagcaagagacaatggctcagcacccttacagagtaatgtcactgttaggctaattgtt
caggacctcaatgacaacagcccagctttcactcaccctgagtacaacttctatgtgcct
gagaacctgccgctttatgggacagtgggcttgatcacagtgacagatacagatgctgga
gataatgctgttatcaccttgtctattttgaacggcaaagacaatttcatcattgaccct
caaactggtgtgatcaaaccaaatatcacctttgacagggagcagcaaagctcatatacc
ttcatggtcaaagcaattgatggaggacagcctccaagttcctcctacgccaaggtcacg
attaatgttgtcgatgtgaatgacaatcgccctgtgtttgttatcccttcctccaattat
tcatacgacctggtgcgaaccaccacctccccaggttctgtggtgaccagagtgtttgcc
attgacaatgacacaggtatgaacgctgagttgcagtacagtatcatcagcaacatcatc
atcacatctagggtctcccctcgaggtctcttttccatcgacaaaaccactggtaacata
acactgcaggagaaaattgtactagctgatcagggactgcatagactggtggtcaaggtc
aaagatttaggccaacctgagtcattacatgctattgcacttgtacacttgtttgtcaat
gacactgtgtcgaattctacctttatccaagagcagctgcgaaaaagtatggaaacacca
ttggaccgtaatataggggacaatgagataacgcctcaagccaatggatatgtaattgtt
gttatagcgatcatagcaggaaccatgactgttattttggtgatatttgtcaccgccttg
gtgcgctgccggcagacacctagacataaagtagtacagaaaggcaagcagagtggggag
tgggtgtcacccaaccaagagaaccgtcaaatcaagaagaagaagaagagaaagaagcga
tctcctaagagccttctcctaaactttgtgaccatagatgaatccaagcctgaagacccc
acacacgagcatgttaatggcaccctggatcttcctgtagagcttgaggagcagaccatg
ggaaagtacaattgggcaaccacgcctacaaccttcaaacctgacagcccagacttagcc
aagcattataaatctgcatcccctcagcccacatttcagatcaaaccagaaactcctgtg
gcccctaagaaacatcacgtgatccaggagctccccttggacaatacgtttgtggtgggc
tgcgactcactctccaagtgttcatcgactagctccgacccatacagtgtctcagagtgc
ggctgtcaggggggattcaaggctgcagggcaaatcgccacccggcagaaccccggccag
acgccagagaagtctttcaactctccaccacccatttgtcctcataagttgccagatcta
aatccagtagagcacctctgggatgtggtggaacgggagatttgcatcagggatgtacag
tcaagaaatctgcctcaactgtgtgatgaggcctgtcaacttggcaagataacctctgtg
aatcttgactctgtggtgagaactatgaaaaatctttcttcaaactcggatttctcagac
aactatctactgcagacccatcgtcgtgtgaccttccatcttccggatggttcccaggaa
agttgcagtgacagcgggcttggggacgctgagcccagcagcacagccagtgccacccag
cctctgcccctcagcttcccccaggaggagtactttgagcaagcgtcacctaatagtcgc
accgagggagacggaaactcagaccctgaatctaccattgaagtaaatttgaagaaagct
ctggctgaggcatccgagacctgcacccaggagtgtctaatactgggccactctgacagc
tgctggatgcccccgaccctggcccagctccagagccctggcagcaacagccccacctcc
acccctaccaccaccaccatcactgctgcgctcccctcctttggcttccagggagtaaaa
gctaacataggtggcatgggggtcatggatggccgccacactctgggtagatctgtgccc
aaaagagatgagctggacaaagggttcacccgaccacagttctacaacaccctggataga
cactgcagcagtaagaaggaggacccagtgaaggtcattccactggcaagcttctcctcg
cctgggcagcacactcctactggtggcagcagctctttcctacacgagcaccagctgtaa
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integrated database retrieval system
