Poecilia mexicana (shortfin molly): 106918203
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Entry
106918203 CDS
T08022
Symbol
srrm1
Name
(RefSeq) serine/arginine repetitive matrix protein 1 isoform X1
KO
K13171
serine/arginine repetitive matrix protein 1
Organism
pmei
Poecilia mexicana (shortfin molly)
Pathway
pmei03013
Nucleocytoplasmic transport
pmei03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pmei00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
106918203 (srrm1)
03015 mRNA surveillance pathway
106918203 (srrm1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pmei03019
]
106918203 (srrm1)
03041 Spliceosome [BR:
pmei03041
]
106918203 (srrm1)
Messenger RNA biogenesis [BR:
pmei03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
106918203 (srrm1)
Spliceosome [BR:
pmei03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
SR-related proteins
106918203 (srrm1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PWI
Motif
Other DBs
NCBI-GeneID:
106918203
NCBI-ProteinID:
XP_014843253
LinkDB
All DBs
Position
Unknown
AA seq
863 aa
AA seq
DB search
MDAGFFRGTSAEQDNRFSNKQKKLLKQLKFAECLDKKVDMTKVNLEVIKPWITQRVTEIL
GFEDDVVIEFIFNQLEEKHPDSKMMQINLTGFLNGKNAREFMRDLWPLLLSAQENIAGIP
SAFLEQKKEEIRQRQIEQEKLASLKKVDQDKKDKDTRERTRSKSPRRWKTRSPGKRERKR
SPSRSPVRKPSPVVGDSPPPPLMQSNTKMSQQQPEEPDTSGTGLPETVVQEASSTGLIDT
VVESVKADSLTEVKEPSPEKSLKKDERPRSREREKETRKERPHHRSRSRSHSRSRRRRSR
SRSYSPRRRQSPRRRMSPRRRSPPRRGPTGSRHRHRRSPVRRRRSRSASSSGSSSSGSRS
PKKPVKRISTTPPRKQLHRPGASVSPVGKDKRSPSPRARRGRGSASPPRSSGVKRKPGGR
GDSPSDFVKARTSEGSESEEDKNEKGATADSVQQRRQYRRQNQQSSSDSGSSSSEDEGPK
RSAAGPGARNGEVRRKRSRTPSPRRRHRDPSPRRRRSPSPGRRHRSPSPPRRRRSPSPPR
RRSPSPPPRRRSLSPRRYSPPIQRRYSPSPLPPQKRKLSSSPTKRFSPGPKRRSSRSPKR
RSSPAQRRRSPPSSSSPPRHRRSPLSARPNRDTRSPVMSARRLSPSPANRGRPVRRSTSP
QRRFDSSSTSPSAQRRQQSPPHSSKLIRRVSRTPEPRNKRISPSPKPIRRASSRSRSLSP
QPAAQKRPAPALAPASASPSPSRSASGSPPPPPPAKKATSGSGSQSPSKNSDVDGGGKKK
KKKKEKKHKKDKKHKKHKKHKKEKNSAAATGDVQESRPAEEDGDSRKESESEVDDALDDL
EKHLREKALRSMRKAQMSPSEMS
NT seq
2592 nt
NT seq
+upstream
nt +downstream
nt
atggacgcgggatttttccgcggcacgagtgcggagcaagacaaccgtttcagcaacaag
cagaaaaaattgctgaagcagctgaaatttgcagaatgtctcgacaagaaggtggacatg
accaaagtgaacctagaagtcatcaaaccatggatcactcaacgtgtgactgagattctg
ggatttgaggatgatgtggtcatagagttcatattcaaccaacttgaagagaagcacccc
gacagcaagatgatgcagatcaacctgacggggttcctgaatgggaagaacgcccgggag
ttcatgagggacctttggcccctgctgctgagcgcacaggagaacatcgctggcatcccc
tctgcttttctggagcagaagaaagaagaaatccgacagagacagattgaacaggagaag
cttgcttctttgaaaaaggttgaccaggataagaaggacaaggacacaagagaaaggact
cgatcaaagagcccaagaaggtggaagacgaggtctccagggaagcgtgaaaggaagcgt
agtccgtcgcgatccccagtgcgcaaacccagcccagttgttggagactccccccctcca
cctctgatgcagtccaacactaaaatgtctcagcagcagcctgaggagccagacacgtca
ggaacaggcctgccagaaaccgttgtccaagaagcttcgtctactgggttaattgacaca
gttgtagagtcagttaaagcagactctttgaccgaagtcaaagaaccatccccagagaaa
tcgctcaaaaaagatgaaagaccaaggtctcgtgaaagagaaaaggaaacaaggaaggaa
agaccccaccaccgctctcgctcacgttctcactctcgttctcgcaggcgacgctcccgg
tctagatcttactcccctcgtagaagacaaagtcccagaaggagaatgtctccccgtcgg
aggagtccccctagacgtggccccaccggctccaggcacagacaccggcggtctcctgtt
cgcaggaggcgttcccgttctgcttcatcttctggtagcagctcctcagggtcacgttca
cctaagaaacctgtgaagagaatatctaccacgccgccccggaaacagctccatcgtcct
ggtgcttctgtaagcccagttgggaaggacaaacgctcgccgtctccccgagccaggaga
ggccggggctccgcttccccgccaagatcatcaggtgtaaagcgaaaacctggaggaagg
ggagattctccatctgactttgtaaaggccagaacctctgaggggtctgagtcagaggag
gataaaaatgaaaaaggggcaacagcagattcggtgcagcagcgacgtcagtatcgcagg
cagaatcaacagtcctcttcagattcaggatcttcctcctcagaagatgaaggacctaag
aggtcagcagcagggccaggcgccagaaatggtgaagtaaggaggaaacgcagccgtacg
ccttcacctcgtaggcgacatagagatccctccccgaggaggagacgttctccatctcct
ggacgcagacatcgctctccttctccccctcgacgtcgtagatctccctcccctcccaga
cgcaggtctccttcccctcctccccgccgtcgctctctgtcccccagacgatattctccc
cctatccagcgccgctacagcccctcacctttgcctccacagaagaggaagctgtccagt
tctcccacgaagcgcttttctccaggccctaagcgacgctcctccagatcacctaaacgt
agaagctctcccgcacagcggcgacgctcgcctccttcctcctcgtctcccccgagacat
agaaggagcccactgtctgccaggccgaacagggacacccgatccccggtcatgtctgct
agacgcctctccccctcccccgctaaccgaggtcgccctgttcggcggtccactagtccc
cagagacgctttgattcgtccagcacgtccccctctgcccaacgaagacagcagtcccct
ccacatagcagtaagctcattcgtagggtgtctcgcaccccagagccgcgtaacaaaaga
atctctcccagtccgaagcctataagaagagcttcgtccagatcccgatcgctttcccct
caaccggcagctcagaaacgtccggccccggctctggccccggcctcagcttccccgtca
ccttcccgctccgccagcgggtctccacctcctcctcccccggccaaaaaggctaccagt
ggttctggcagtcagtctcccagcaagaattcagatgttgatggtggtggaaagaaaaag
aagaagaagaaggaaaagaaacacaagaaagataagaagcacaaaaagcacaagaagcat
aagaaggagaaaaacagtgctgctgcgaccggagacgtccaagagagtcgacctgcagag
gaagacggcgattcgagaaaggaatcggagagcgaagtcgatgacgccttagacgatctg
gaaaagcacctccgagaaaaggcactgcgctcaatgaggaaggcccagatgtctccttca
gagatgtcctga
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