Poecilia mexicana (shortfin molly): 106918454
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Entry
106918454 CDS
T08022
Name
(RefSeq) transcription factor Sox-1a isoform X1
KO
K09267
transcription factor SOX1/3/14/21 (SOX group B)
Organism
pmei
Poecilia mexicana (shortfin molly)
Brite
KEGG Orthology (KO) [BR:
pmei00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pmei03000
]
106918454
Transcription factors [BR:
pmei03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
106918454
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SOXp
HMG_box
HMG_box_2
HMG_WDHD1
KOKOPELLI
Motif
Other DBs
NCBI-GeneID:
106918454
NCBI-ProteinID:
XP_014843727
Ensembl:
ENSPMEG00000002892
UniProt:
A0A3B3WH76
LinkDB
All DBs
Position
Unknown
AA seq
344 aa
AA seq
DB search
MYSMMMETDLHSPGPQTNTSTGPTGPNGGSKASQERVKRPMNAFMVWSRGQRRKMAQENP
KMHNSEISKRLGAEWKVMSEAEKRPFIDEAKRLRAMHMKEHPDYKYRPRRKTKTLLKKDK
YSLAGGLLSGPSGGGGVGLSVGMSSSGVGQRLESPGGHGGSAGSGYAHMNGWANGAYSGQ
VAAAAAAAAMMQEAQLAYSQHPGSGAHHHHHSHHHHSHNPQPMHRYDMTALQYSPISNSQ
SYMNASPSSYGGITYTQHQGSGVSSSAAMGTLGSLVKSEPSVSPPVSGTHSRGPCPGDLR
EMISMYLPTGEPGDPSMQSRLHALPQHYQSAAAGVNGTVPLTHI
NT seq
1035 nt
NT seq
+upstream
nt +downstream
nt
atgtatagcatgatgatggagactgaccttcattcccccggcccccaaacgaacacgagt
acggggccaacggggccgaacggcggctccaaagcgagccaggagcgcgtgaagagaccc
atgaacgcgttcatggtgtggtcccggggccagcgaaggaagatggcacaggagaacccc
aagatgcacaattcggagatcagcaagcgtctgggcgccgagtggaaggtgatgtccgag
gcggagaagcgtcctttcatcgacgaggcgaagcggctgcgagccatgcacatgaaggag
catccggattacaagtaccggccgcggcgaaagacgaagacgctgctgaagaaggacaaa
tactcactggccggcgggctgctttccgggcccagcggcggcggtggggtcggtttaagc
gtcggcatgagctcatccggggtcggacagaggttagagagccccgggggtcacggaggc
tccgccggctccggctacgcgcacatgaacggctgggcgaacggcgcgtactcggggcag
gtggccgcagccgccgcggccgctgcgatgatgcaggaggcgcagctcgcctacagccag
catcccggcagcggggcgcaccaccaccaccactcgcaccaccaccactcccacaacccg
cagcccatgcaccgctacgacatgacggccctgcagtacagccccatctcgaactctcag
agctacatgaacgcctctccgtccagctacggcgggatcacctacacgcagcaccagggc
tccggcgtctcctcctcggctgccatgggaacgctggggtcgctggtgaagtcggaaccg
agcgtgagtccacccgtcagcggcacgcactctcggggtccctgccctggagacttgagg
gagatgataagcatgtatttaccgaccggggagccgggggacccgtccatgcagagcaga
ctgcacgccttgccgcagcattaccagagcgccgcggctggagtgaacgggacggtccct
ctgacgcacatttag
DBGET
integrated database retrieval system
