Poecilia mexicana (shortfin molly): 106918679
Help
Entry
106918679 CDS
T08022
Symbol
ncbp1
Name
(RefSeq) nuclear cap-binding protein subunit 1
KO
K12882
nuclear cap-binding protein subunit 1
Organism
pmei
Poecilia mexicana (shortfin molly)
Pathway
pmei03013
Nucleocytoplasmic transport
pmei03015
mRNA surveillance pathway
pmei03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pmei00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
106918679 (ncbp1)
09122 Translation
03013 Nucleocytoplasmic transport
106918679 (ncbp1)
03015 mRNA surveillance pathway
106918679 (ncbp1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pmei03019
]
106918679 (ncbp1)
03041 Spliceosome [BR:
pmei03041
]
106918679 (ncbp1)
Messenger RNA biogenesis [BR:
pmei03019
]
Eukaryotic type
mRNA processing factors
5' end processing
Cap binding complex
106918679 (ncbp1)
Spliceosome [BR:
pmei03041
]
Common components
Common spliceosomal components
Cap binding complex
106918679 (ncbp1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MIF4G_like_2
MIF4G_like
MIF4G
HmpF
AAA_13
Vfa1
AAA_11
DUF1690
RRF
Importin_rep_6
WIT1_2_N
PHM7_cyt
DUF1664
Motif
Other DBs
NCBI-GeneID:
106918679
NCBI-ProteinID:
XP_014844096
Ensembl:
ENSPMEG00000019821
UniProt:
A0A3B3YXJ8
LinkDB
All DBs
Position
Unknown
AA seq
796 aa
AA seq
DB search
MSRRRHSDENDGGQAHKRRRTSEPIEIEDRLESLICRVGEKSTSSLESNLEGLAGVLEAD
LPNYKNKILRILCAVARLLPEKLTVYTTLVGLLNARNYNFGGEFVEAMIRQLKETLKNNL
YNEAVYLVRFLSDLVNCHVIAAPSMVVMFENFVSVTQEEDVPQVRSDWFVYVVLSCLPWV
GKELYEKKDVEMDRLLSQIEGYLKRRVKTHVPMLQVWTAEKPHPQEEYLDCLWAQIQKLK
KDRWQERHILRPYIAFDSVLCEALQHNLPPFTPPGHMPDAQYPIPRVIFRMFDYTDAPEG
PVMPGSHSAERFVIEENLHCIIKTHWRERKTCAAQLLSYPGKNKIPLNYHIVEVIFGELF
QLPLPPHIDVMYTTLLIELCKLQPGSLPQVLAQATEMLYMRLDTMNTTCIDRFINWFSHH
LSNFQFRWSWDDWADCLTLDLEKPKPKFVKEVLEKSMRLSYHQRIVDLVPPTFSALIPAE
PIFSFKYGDESGTSLPGYPVSITVSNAIKNRASNEEILAILKEVPNPNQEDDDDEGESFN
PLKIDVFLQTLLHLAAKSFSHSFSALGKFHEILKNLTESDDGKLHILKVVYEVWRNHPQM
IAVLVDKMIRTQIVDCAAVANWLFSQDMAHEFTRLFIWEILHSTIRKMNKHVQKIQNELE
EAKDKLEKQQHKRRDSGDDEDMEKNSEEDEEGQLEEQIERLQEKVESAQSEQKNLFLVIF
QRFIMLLTEHLVRCETGSVDISTPWYKNCIERLQQIFLMHHGTIQQYMGTLENLLFTAEL
DHHILAVYQQFCALQL
NT seq
2391 nt
NT seq
+upstream
nt +downstream
nt
atgtccaggaggcgacatagcgatgagaacgacggaggtcaagctcataagaggaggaga
acatctgagcccattgaaattgaagatcgcctggagtcgttgatatgtcgcgtaggagaa
aaaagcacttcatccctcgagagcaacctcgagggcctcgcaggcgtcctggaggccgac
cttcccaactacaaaaacaaaatcctgcgtatattatgtgctgttgctcgcctgctgcca
gagaagctcaccgtctacacaacgttagtcggtctcctcaatgccagaaactacaacttt
ggtggcgagtttgtggaggcgatgatcaggcagctgaaggaaaccttaaaaaacaacctg
tataatgaagcagtttacctggtgcgctttctgtctgatttggttaactgccatgtcatc
gccgctccatctatggtggtaatgtttgaaaattttgtcagtgttactcaagaggaagac
gtgccacaggttcgatcggactggtttgtgtatgtcgttctgtcctgccttccctgggtc
ggaaaggagctttatgagaagaaggatgttgaaatggaccgactcctcagtcagattgaa
ggctacctcaagaggagagtcaagactcatgttcccatgctgcaggtgtggacagcagag
aaaccccatccacaggaagagtacctggactgtctgtgggcccagatccagaagctgaag
aaagaccgctggcaggagcgccacatccttcgtccgtacatcgccttcgacagcgttctc
tgtgaggcgctccagcacaacctgcccccgttcactccgccgggacacatgcctgatgcc
cagtaccccatcccccgggtcatcttccgcatgttcgactacaccgatgccccagagggt
cccgttatgccgggcagccattctgcagagcggtttgtgattgaagaaaacctgcactgt
atcatcaaaacccactggagagagaggaaaacatgtgctgcccagctgctcagttaccct
ggaaaaaacaagatcccactgaactaccacatcgtggaggtgatctttggagaacttttc
cagctgccgttaccgccccacatcgacgtcatgtacactacgctcctcatcgagctctgc
aagctgcagccagggtcactccctcaagttctggcccaggccacagagatgctttacatg
aggctggacacaatgaacaccacctgcatagacagattcatcaactggttttcccatcat
ttgagcaacttccagtttcgatggagctgggatgactgggcggactgtttgacattggat
ttagagaaaccaaagcccaagtttgtcaaagaggttctggagaaatcgatgagactttca
taccatcagaggatcgtggaccttgtccctccaactttctccgccctcatccctgctgag
cccatcttttctttcaaatacggagatgagagtggcacctcgttaccaggttacccagtt
tccattacagtttccaatgccataaagaaccgagcgtccaacgaggaaatcctcgccatc
ctcaaagaagtccccaacccaaaccaggaggatgatgatgatgagggtgaaagcttcaac
ccactgaagatcgatgtgtttcttcagactctcctccatctggcagcgaagtccttcagc
cattccttcagcgcgcttggcaaattccatgagatccttaaaaacctgacggaaagcgac
gacgggaagctgcacatcctgaaagtggtttatgaggtgtggaggaaccaccctcagatg
atcgccgtgttggtggataaaatgattcggacgcagatcgtggattgtgccgctgtggct
aactggctcttctctcaggacatggctcacgagttcaccagacttttcatctgggagatt
ctgcactcaaccatccgaaagatgaataaacacgtgcagaagatccagaatgagctggag
gaagctaaagataagctggagaaacagcagcacaagaggagggacagcggggacgacgag
gacatggagaagaacagcgaggaggacgaggagggtcagctggaggagcagattgagagg
ctgcaggagaaggtggagtcggctcagagcgagcagaaaaacctcttcctcgtcatcttc
cagcgcttcatcatgctgctgacggagcatctggttcgctgcgagacgggcagcgtcgac
atcagcacaccctggtataaaaactgcatcgagcggctgcagcagatcttcctcatgcac
catggaaccatccagcagtatatgggaactctggagaacctgctgttcaccgctgagctc
gaccatcacatcctggccgtctaccagcagttctgcgcgctgcagctctga
DBGET
integrated database retrieval system
