KEGG   Poecilia mexicana (shortfin molly): 106918687
Entry
106918687         CDS       T08022                                 
Name
(RefSeq) WD40 repeat-containing protein SMU1 isoform X1
  KO
K13111  WD40 repeat-containing protein SMU1
Organism
pmei  Poecilia mexicana (shortfin molly)
Brite
KEGG Orthology (KO) [BR:pmei00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:pmei03041]
    106918687
Spliceosome [BR:pmei03041]
 Complex B
  Other components
   Complex B specific factors
    106918687
SSDB
Motif
Pfam: Beta-prop_WDR5 WD40 Beta-prop_THOC3 Beta-prop_WDR3_1st WD40_WDHD1_1st WD40_Prp19 Beta-prop_TEP1_2nd WD40_CDC20-Fz Beta-prop_EML_2 Beta-prop_WDR36-Utp21_2nd Beta-prop_WDR3_2nd WDR55 WD40_MABP1-WDR62_2nd EIF3I Beta-prop_WDR36-Utp21_1st Beta-prop_CAF1B_HIR1 WD40_Gbeta ANAPC4_WD40 LisH_TPL Beta-prop_EML Beta-prop_WDR90_POC16_2nd Beta-prop_WDR75_1st NBCH_WD40 Beta-prop_ACSF4 Beta-prop_RIG_2nd Ge1_WD40 Beta-prop_TEP1_C WDR90_beta-prop_4th Beta-prop_Nup120_160 Beta-prop_VPS8 Beta-prop_Aladin Beta-prop_Vps41 WD40_MABP1-WDR62_1st Beta-prop_WDR41 Beta-prop_NWD2_C Beta-prop_DCAF4 Beta-prop_IFT122_1st Beta-prop_HPS5 Beta-prop_NUP159_NUP214 Beta-prop_IFT140_1st Beta-prop_WDR35_TULP_N Beta-prop_SPT8 Beta-prop_EIPR1 Beta-prop_WDR19_1st Beta-prop_SCAP RMC1_N Beta-prop_BBS7 Beta-prop_DCAF12 WD40_RFWD3 Beta-prop_WDR75_2nd Beta-prop_NOL10_N Beta-prop_IP5PC_F LisH LisH_PAC1 VPS8_N LisH_WDR26 PROPPIN DUF7165 WD_LRWD1 Beta-prop_IFT122_2nd PA14
Other DBs
NCBI-GeneID: 106918687
NCBI-ProteinID: XP_014844108
Ensembl: ENSPMEG00000019640
LinkDB
Position
Unknown
AA seq 540 aa
MSIEVESADVVRLIMQYLKENNLHRTLATLQEETTVSLNTVDSIESFVADINSGHWDTVL
QAIQSLKLPDKTLIDLYEQVVLELIELRELGAARSLLRQTDPMIMLKQTQPERYIHLENL
LARSYFDPREAYPDGSSKEKRRAAIAQALAGEVSVVPPSRLMALLGQVSNLKTFKPALYT
QVADISQLLNFLLQSLKWQQHQGLLPPGMTIDLFRGKAAVKDVEEERFPTQLSRHIKFGQ
KSHVECSRFSPDGQYLVTGSVDGFIEVWNFTTGKIRKDLKYQAQDNFMMMDDAVLCICFS
RDTEMLATGAQDGKIKVWKIQSGQCLRRFERAHSKGVTCVSFCKDTSQLLSASFDQTIRI
HGLKSGKSLKEFRGHASFVNEATFTPDGHHIISASSDGTVKVWNVKTTECSSTFKPLGTS
AGTDITVNNVLLLPKNPEHFVVCNRSNTVVIMNMQGQIVRSFSSGKREGGDFVCCTLSPR
GEWIYCVGEDFVLYCFSTVTGKLERTLTVHEKDVIGIAHHPHQNLIATYSEDGLLKLWRP
NT seq 1623 nt   +upstreamnt  +downstreamnt
atgtctattgaagttgaatctgcagacgtggtgcgtctgattatgcagtacttaaaggaa
aataatctgcaccgaaccctggccacgttgcaagaggagacaacagtgtctctaaacaca
gtggacagcatagaaagctttgtggcggacatcaacagtggtcactgggataccgttctg
caagccatccagtccctcaagctaccagataaaaccttgatagatctttatgaacaggtt
gtcctggagcttattgagctgagagagctcggtgctgctcgttcacttctcagacagacc
gatcccatgatcatgctcaaacagacacagccagagagatacatccacctggagaacctg
ctggctcgctcctacttcgatcccagagaggcttacccagatggcagcagtaaagagaag
cggcgcgcggccatcgctcaggccctggcaggagaggtcagcgtggtgccgccctcccgt
ctcatggctctgctgggacaggttagtaaccttaaaacctttaaacctgcattatataca
caagttgctgacatttcacaactcttaaatttccttcttcagtctctgaagtggcagcag
catcaaggtctcctgccgcctggtatgaccatcgacttgttcagaggtaaagccgctgtg
aaagacgtggaggaggagcgcttccccactcagctgagcaggcacataaagtttggacag
aaatctcacgtggagtgttctagattctcccctgatggtcagtacctggtcactgggtct
gtggacggattcattgaagtatggaacttcaccactggaaaaatcaggaaggatctgaaa
tatcaggctcaagataacttcatgatgatggatgatgctgtgctgtgtatatgcttcagt
cgagacaccgagatgttagcaactggagcccaggatggaaagattaaggtgtggaagatt
cagagtggtcagtgtctgaggagattcgagcgcgcccacagcaaaggagtaacttgtgtg
agtttctgtaaagacaccagccagctgctcagcgcctccttcgatcagaccatcagaatc
catggactgaaatctggtaaatcactgaaggagttccgtggccacgcctcgtttgtcaac
gaagctacatttaccccagacggccatcacatcatcagtgcgtcctcagatggaacagtc
aaagtgtggaacgtgaaaaccacagagtgcagcagcacttttaagcctctcggtacgtca
gctggcacagacatcaccgtcaacaatgtcctcctgctgcccaagaaccctgagcatttc
gtagtgtgtaaccgctccaatacagtagtcatcatgaacatgcagggacagattgtgagg
agtttcagctccggtaaaagggaaggcggtgactttgtgtgctgcacgctgtcgccccgc
ggcgagtggatctactgcgtaggtgaagactttgtgctctactgcttcagcaccgtcaca
ggcaaactggagagaacactgacggttcatgagaaagatgtgattggcatcgctcatcac
ccccaccagaacctgatcgccacttacagcgaggatggcctgctgaaactctggagaccc
tga

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