Poecilia mexicana (shortfin molly): 106918822
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Entry
106918822 CDS
T08022
Symbol
poln
Name
(RefSeq) DNA polymerase nu isoform X1
KO
K16618
DNA polymerase nu [EC:
2.7.7.7
]
Organism
pmei
Poecilia mexicana (shortfin molly)
Pathway
pmei03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
pmei00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
106918822 (poln)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pmei03400
]
106918822 (poln)
Enzymes [BR:
pmei01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
106918822 (poln)
DNA repair and recombination proteins [BR:
pmei03400
]
Eukaryotic type
TLS (translesion DNA synthesis) factors
A-family DNA polymerase
106918822 (poln)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol_A
DNA_pol_P_Exo
DUF1463
Motif
Other DBs
NCBI-GeneID:
106918822
NCBI-ProteinID:
XP_014844331
LinkDB
All DBs
Position
Unknown
AA seq
1297 aa
AA seq
DB search
MEQSSSRLYAGPLSQAALKILAALRAENQDQHRGNLHSSSSRRQMERCNYTHVESWTPSS
CSQSESKDTFSCWPICDHNSTNETQSRQTPANVQASLQKKTPQAFPFHQRFQTQISHRSC
PDPPAHLHRQVVSSSQETESSSYQHNTFSFPLQLPNCLSDQQTSPCNRSAGILKPAFMLS
QFKDVEGPDETFPSTTEQPDSHSAACHTLLPFSDERKETVNSSSAHNEDEAIWDVGADEA
ESLELPGTRVKWIESVSNLSEEAAGGVDKHQQSELNTTETKRGHLPPIDFVTKDVGQTVA
DTAERRLSEGPLVQSEATTFILEDNSAHDLERFGLVAVAVESRTETDYEGNIEHKLLNCF
ATKDTDSHRINTNVQKLEEVRVLPKSAEGSDGERCLVPTLSMEFEPLGSEFRPLDCPDNQ
QPHGDLQTKRKSDVVLIPERSQNSSLPQDLITNTTSLDKELYTKQQTSGIHSHHPPSFPQ
KRRCEVFQHQCVNLSLKSHKKSCPPKWELPHSSPQTVVEGGVGKVKKIRLQPSISGCPTS
SEEQQVKITPKTDVRFKIPKQSHVLEQTGPISQSKLEKSSNEMGTIGPKQKLFAKLCKHR
LAKLRIDPAIVGLKGFHDVVTTSELQAHSKAGLQPTSLTSDGRIKDSGRLNPEERVEMLQ
QAGQAEAVVLTMMFQDGATQLDHEQKLAPAVCGLLVLMKNDLCCATPCWSLGPNDSLVYL
KLEHNPPWAQQQLQHTQQPFTRDMILCVLSRSKLVVCYKAKDFLRTVLLVYKQDLSWKRV
AGCQIQDPQVSGWLLDPSDPSSCFKDLLNKHCKKPRATPSLSPDKASQIISSLYWLFDLH
LALCSKLQSHGLWELYSEIELRMITVLAVMESHCIYVDKGALKRTSDLLGTKMKQLEQEA
HKAAGEIFLVTSSAQLRTVLFEKLRLQERCENKKLPKTVNKQQQSTSEAALLQLQDLHPL
PKIILEYRQVHKIKSTFVDGILSCMKSKNYISSTWHQTSAVTGRISAKHPNFQALPRQPL
QISQKQNIQGKEEEVVTIHPRDMFIPREGWSFLAADFCQVELRLLAHFSSDPELLRVFTD
PQADVFTLLASQWKVVDVDEVTPEDREHAKRIVYSVVYGAGRERLSGILGVNVEQASRFQ
DSFLQTYRGVQAFIQRTIQQSHKQGYVVSLMGRRRLLPNVSSPDWGLRMQAERQAVNFVV
QGSAADLCKMATITIFNLVSSSSSLSARLLAQLHDELLYEVEDSQVEKFAALVRSTMESL
QHIHHLGVHLKVPLKVAVSVGKSWGSMSELHTPPSVS
NT seq
3894 nt
NT seq
+upstream
nt +downstream
nt
atggagcagtcgagcagcaggttgtacgctggtccactctcccaggcagccctgaagatc
ctggcagctctacgggccgagaatcaggatcagcacaggggcaatctccactcctccagc
agtcgcaggcaaatggaaaggtgtaattacacccatgtggagtcatggactccaagcagc
tgcagtcagtcggaaagtaaagacactttctcctgttggcctatctgtgaccataactct
accaacgagacacagagtcgtcagactcctgccaatgttcaggcctctctccagaagaaa
actcctcaggcgttcccctttcaccagcgtttccagacacagatctcccacagatcgtgc
ccagaccccccggctcacttgcacagacaggtggtgtcatcctctcaggagacagaatca
tcctcctaccaacacaacacattttcctttcctctccaactaccaaactgtctgtctgat
caacaaacttccccctgcaacagatctgcaggtatattaaagccagctttcatgctcagt
caattcaaagacgtcgaaggccccgatgaaacgtttccctcgacaacagagcagcctgat
tctcattctgcagcttgtcacacgctattacccttctctgacgaacgtaaagagacagtg
aactcatcaagtgcacataacgaagacgaagctatctgggatgttggtgccgatgaggca
gagagccttgaacttccaggcacgagagtaaagtggatagagagtgtgtctaacctctca
gaagaggctgccggtggtgtagataaacatcagcaatcagagctgaacacaactgaaact
aaaaggggtcacttgcctcccattgactttgtaacaaaagacgtgggccagacggtggct
gatacagcggagaggagactctcagagggaccactagttcagtctgaagccactacattt
atcctggaggacaatagtgctcacgacctggaacggttcggcctggtagccgtggcggtg
gaaagcaggacagaaacagactatgagggaaacattgaacacaagctgctgaactgcttt
gctactaaagacacagattcacacagaataaacacaaatgtgcagaagttagaggaagtt
agagttctgcctaaatctgcagagggctcggatggtgagcgatgtcttgtaccaacgctt
tccatggagttcgagccgcttgggtcagagttcagacctcttgattgtcccgacaaccag
caacctcatggcgatctgcagaccaagagaaaatcagacgtggtcctgatcccggaaagg
tcacaaaactcctccttgccccaggacttgatcacgaatacaacatcacttgacaaagaa
ctatacacaaaacaacagacttctgggattcactcgcatcatcctccatcctttccccaa
aaaagaagatgtgaggttttccagcatcaatgtgtaaatctatccctcaagagccacaaa
aaaagttgccctccaaagtgggaactgcctcattcctcaccacagacagtggtggaagga
ggcgtcggcaaggtgaagaaaatcagacttcaaccatccatttctggatgcccaacatca
tcagaagaacagcaggttaaaatcactccgaagacggatgttaggtttaaaatccctaaa
caatcgcatgttctggagcaaactgggcccattagtcagagcaaactggaaaagtcctcc
aatgaaatgggaacgattgggcccaaacagaagctctttgcaaaactatgcaaacacagg
ttggccaaattgaggattgatccagccatcgttggtctaaaaggttttcatgacgtggtt
acgactagtgagctacaagctcactccaaagctggcttacaacctacaagcctgacatct
gatggcagaataaaggattctgggaggctgaacccagaggagagagtggagatgctgcag
caggctgggcaggcggaggcggtggtgctaaccatgatgtttcaggatggagcaacccag
ttagaccatgaacagaagctcgccccagcagtgtgcggcctccttgtgctgatgaagaat
gatctttgctgcgccacaccttgttggtcactggggccgaatgacagcctggtctactta
aaactagagcacaaccctccgtgggcacaacagcaacttcagcacactcagcagcctttt
accagagatatgatactatgtgtgctgtcaaggtctaaactggtggtttgctacaaagcc
aaggattttcttcgtacagttctgctggtatacaagcaggatctaagctggaaacgagtg
gcaggttgtcagatccaagatccacaggtttcagggtggctgctggatccctctgatccc
tcctcctgcttcaaagacctgcttaataaacactgcaaaaagccacgcgcaacaccttcc
ctgagtcctgacaaggcctctcagatcatctcaagtctctattggctctttgaccttcat
ctggctttatgctctaaactacagagccatggcttgtgggaactctactcagaaatagag
ctgagaatgatcactgttcttgctgtcatggaaagccactgcatctatgtggacaaagga
gcacttaagagaacttcagacctgcttgggactaaaatgaagcagctggagcaagaggcc
cacaaagcagctggggaaatattcttggtgaccagcagcgctcagctacgaacagtactg
tttgagaagcttcgcttgcaggagcgctgcgagaacaagaagcttcccaagaccgtcaac
aaacaacaacagtcaacatcagaggcagcgttgctacagctccaggaccttcatcctctg
ccaaaaatcatcctggagtaccgacaggtccacaagatcaagtccacgtttgttgatggg
attttgtcgtgcatgaagagcaagaactacatttcctctacgtggcaccagacgagtgct
gtgaccgggagaatatcagccaaacaccctaacttccaagccttgccaaggcagccgctt
caaatcagccagaagcagaacattcaaggaaaggaggaggaggttgtgacgattcatcct
cgagacatgttcattccccgggagggctggtcttttcttgctgcggacttctgccaggtg
gagctccgcttgctggcccacttctcctcggatccggagctgctccgcgtttttaccgac
ccgcaggccgacgtcttcaccttgctggcctctcagtggaaagtggtggatgttgatgag
gtgacccctgaagacagggagcatgccaaacgcatcgtatattctgtggtttatggagca
ggccgtgaacgtctgtcagggattttgggggtgaacgttgagcaggctagtcgtttccag
gacagtttcctccagacctacagaggagtccaggcgttcatccagagaaccatccagcag
agccacaagcaaggttatgtggtgtcgttaatgggacgccggcgtctccttcccaacgtc
agctccccggactgggggctccgcatgcaggctgagaggcaggccgtcaactttgtggtt
cagggctctgctgcagatctctgtaagatggctacgatcaccatctttaacctggtctcc
tcctccagctcgctctctgccaggcttttagctcagcttcatgatgagcttctttatgaa
gtggaagactctcaggtggagaagtttgcagctctggtgagaagcaccatggagtccctt
cagcacatccaccatctgggagtccatctgaaggtacccctgaaggtggcggtctctgtt
ggcaagtcgtggggatccatgtcagagcttcacactccgccttctgtctcctga
DBGET
integrated database retrieval system
