Poecilia mexicana (shortfin molly): 106918911
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Entry
106918911 CDS
T08022
Symbol
itga4
Name
(RefSeq) integrin alpha-4 isoform X1
KO
K06483
integrin alpha 4
Organism
pmei
Poecilia mexicana (shortfin molly)
Pathway
pmei04510
Focal adhesion
pmei04512
ECM-receptor interaction
pmei04514
Cell adhesion molecules
pmei04672
Intestinal immune network for IgA production
pmei04810
Regulation of actin cytoskeleton
pmei04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
pmei00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
106918911 (itga4)
04514 Cell adhesion molecules
106918911 (itga4)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
106918911 (itga4)
09142 Cell motility
04820 Cytoskeleton in muscle cells
106918911 (itga4)
04810 Regulation of actin cytoskeleton
106918911 (itga4)
09150 Organismal Systems
09151 Immune system
04672 Intestinal immune network for IgA production
106918911 (itga4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pmei04147
]
106918911 (itga4)
04515 Cell adhesion molecules [BR:
pmei04515
]
106918911 (itga4)
04090 CD molecules [BR:
pmei04090
]
106918911 (itga4)
Exosome [BR:
pmei04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
106918911 (itga4)
Exosomal proteins of other cancer cells
106918911 (itga4)
Cell adhesion molecules [BR:
pmei04515
]
Integrins
Integrin alpha subunits
106918911 (itga4)
CD molecules [BR:
pmei04090
]
Proteins
106918911 (itga4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Integrin_A_Ig_1
FG-GAP
Integrin_A_Ig_2
Integrin_A_Ig_3
FG-GAP_3
DUF11
Integrin_alpha
FG-GAP_2
Motif
Other DBs
NCBI-GeneID:
106918911
NCBI-ProteinID:
XP_014844475
Ensembl:
ENSPMEG00000012645
LinkDB
All DBs
Position
Unknown
AA seq
1021 aa
AA seq
DB search
MGVVFCLVPVQVLVLVLVCPAAGYNLDQEHSMVFKGPHSSMFGYSVLLHRHNSGKWLLVG
APVANSSRHLTQSPGAVFRCNIMDEKRRCDRLSAEISSCGKTCEPESDHQWLGVSLSRQP
GENGGRVLACAHRWKNVYYSRKDGQNNKLPNGACFRYESDLVSYQLFIPCYKDHQRKFGE
DYGSCQAGISNFLTQELIIVGAPGSSYWTGSVVVYNTSSNSMSVYQDDETGAVSYGSYLG
YAVGAGHFQSPSSIEVVGGAPQYNQKGKAFIFSTENSKMLQVVSEVTGHELGSYFGSSLC
VVDLNADGLSDLLVGAPMATGTSREEGRVHVYINQGEAQLKEAEFKLTGSDAYAARFGET
IADLGDLDDDGYPDVAVGAPQEDDLRGAVYIYNGRKEGISPKPSQRITGSSLGHDLKMFG
QSLNSGIDIDDNGYNDVAVGAFLSDSAVVLRTRPVVQVKASLIMPEHIDQRGAQCQDHKT
QTVCINVTICFSVTFKHHRGAIELQYNLTSDLLHKPSFPHRFYFHGNGSSNSTRGHMKAR
HGHPSCATHVAYQRKDVKDIYTPVQFEVSYGLSEKRSHKTPSRKLAFIKPILQHSAGHHN
TITNQTRFARSCSMANCSTNMQLSSELVLPQQQKFFALGSGQIVLKTSLLNSGDDAFLPR
VTLRFPNNIHYIKVLHNQEANVISCDVTEEVNTTDVKVDCRITSLVLPALSQVNISFLLD
VSQNSTPGDIHININTSSDNYETVEFLRDNTMTLVLPLKHGVGINIHGFVTPKSFVFDDE
DLIPADCYPEKFNYTFKVLNSGPSKALNTVVQIALPKILAPYPHRLLQLIDWKSSHGSCS
ISDKTISVNEDCNVPQASFIKQIIFFFSPTTTRTMFCGRVDNLCEQLVCRLGNLDAGRDA
TIQLEISLNPAVLLQAPGRHHVMMLESTATVLSPREDAHTVLIKDQPALVVVEAVFSQKP
SMAVKIFIIAVSLVLGLTILTALIWCLWKCGFFKRNFKKQEELNRDSWDYVPKLNKRESS
I
NT seq
3066 nt
NT seq
+upstream
nt +downstream
nt
atgggtgtcgtcttctgcctggttccagtccaggttctggtcctggttctggtctgtcct
gctgcaggttataatctggatcaggagcacagcatggtgttcaagggccctcactcctcg
atgtttggatactctgtgctgctgcatcgccacaactctggaaaatggctgctagtcgga
gctccagtggctaactcctctcgtcatctgactcaatctccaggagccgtttttcgctgc
aacattatggatgagaagcgccgatgtgatcgtctttctgctgaaatttcaagttgtggg
aagacgtgtgaaccggagagcgatcaccagtggctgggtgttagtttgtccagacaacct
ggagaaaatggtggacgtgtcctggcatgtgctcaccgctggaagaacgtgtattactca
aggaaagatggccagaacaacaagcttcctaatggcgcctgttttcgctatgagagtgac
ctggtatcctaccagctctttatcccttgctacaaagaccaccagaggaagttcggtgag
gattacgggtcatgtcaggcgggcatttccaatttcttgacacaggaactgatcatcgta
ggagctccaggatcttcttactggaccggctcggttgtggtctacaacacctccagcaac
tcgatgtcggtgtatcaggatgacgagacaggagctgtcagctatgggagctacctgggt
tacgctgtaggagccggtcacttccagagtccctcttccatagaggtggtgggtggagct
ccacagtacaatcagaagggcaaggccttcatcttctcaacagagaacagcaaaatgctg
caggtggtttcagaagttactggacatgaactggggtcttatttcggctccagtctttgt
gtggtggatctgaatgctgatggattgtcggacctgctggttggtgctcccatggcaaca
gggacctccagggaggagggaagagttcatgtgtacatcaatcagggggaggcgcagctg
aaggaggcggagtttaagctgactggcagcgatgcgtatgcggcgcggtttggagagacc
attgctgaccttggagacctggatgatgatggctatccagatgtggctgttggcgctcca
caggaagacgacctcagaggcgccgtctacatctacaatggcaggaaggagggtatttca
ccaaaaccatcacagaggattacagggtcatccctaggccatgacctgaagatgtttgga
caatcgctgaactctgggattgacatcgatgataacggctacaacgacgtggcggtggga
gctttcctttcagactcagctgtggttctcaggacccgtccagtggttcaagtgaaagct
tctctgattatgcctgagcatattgaccagcggggggcgcaatgccaagatcacaagact
cagaccgtctgcatcaacgttacgatctgcttcagtgtcacatttaaacaccacagaggg
gcaatagagcttcagtataatttgacctccgacctcctccataaaccatcgttccctcat
cgtttctatttccacggcaacggatcatcgaacagcacgaggggtcatatgaaggcacga
cacggccatcccagctgtgcaacacatgtggcttaccaaaggaaagacgttaaagacatc
tataccccagttcagtttgaagtttcctatggcctcagtgaaaagaggagccacaaaacc
ccatccagaaaattagcattcataaaacccattctgcagcacagcgcaggacatcataac
accatcaccaatcagactcggtttgctcgctcttgctctatggcgaactgttcgaccaac
atgcagctgtcgagtgaactagtgctgccacaacagcagaagttctttgctctcggttcg
ggacaaattgtcctgaaaacctccctgctgaactccggagacgatgccttcctgcctcga
gtgacactgagattcccaaacaacatccactacatcaaagtgctgcataatcaggaggcc
aacgtcatcagttgtgatgtcactgaggaagtgaacactacagacgtgaaggtggactgc
agaatcaccagcctcgtcctcccagccctatctcaggtgaacatcagttttctgttggat
gtcagtcagaacagcacgcctggtgacattcacattaacatcaacaccagcagtgataat
tacgagacggttgagtttctccgagataacaccatgacgcttgttcttcctttgaaacat
ggagttggtatcaacatccacggttttgtgactccaaagtcttttgtgtttgacgatgaa
gacttgattccagctgattgctaccctgaaaaattcaactacacatttaaggtgttaaac
tctggacccagcaaggcgttgaacaccgtggttcagattgcgctgccaaaaatcctggca
ccgtacccacacagactgcttcagctcatcgactggaagtcatcacatggttcgtgctca
ataagtgacaaaacgatttcagtcaatgaggattgcaacgttcctcaggcttcattcatc
aaacagatcattttcttcttctctcccaccaccacccgcacaatgttctgtggccgcgtc
gataatctgtgtgagcagctggtgtgtcgtcttggtaacctggatgcgggcagagatgct
accatccagctggagatcagcctgaatcctgctgtgctgctgcaagcaccgggccgtcat
catgttatgatgctggagagcacggcaactgtgttgtcgcccagagaagatgctcacact
gtcctaatcaaggatcaacctgcactggtggtggtggaagctgttttttcccagaaacct
tcaatggctgtgaagattttcatcatcgccgtcagtttagttttaggactgaccatcttg
actgctctcatctggtgtttgtggaagtgtggcttctttaagaggaacttcaagaagcag
gaggagttaaacagagacagctgggactatgttcccaaacttaacaagagggagagctct
atttaa
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integrated database retrieval system