KEGG   Poecilia mexicana (shortfin molly): 106918911
Entry
106918911         CDS       T08022                                 
Symbol
itga4
Name
(RefSeq) integrin alpha-4 isoform X1
  KO
K06483  integrin alpha 4
Organism
pmei  Poecilia mexicana (shortfin molly)
Pathway
pmei04510  Focal adhesion
pmei04512  ECM-receptor interaction
pmei04514  Cell adhesion molecules
pmei04672  Intestinal immune network for IgA production
pmei04810  Regulation of actin cytoskeleton
pmei04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:pmei00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    106918911 (itga4)
   04514 Cell adhesion molecules
    106918911 (itga4)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    106918911 (itga4)
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    106918911 (itga4)
   04810 Regulation of actin cytoskeleton
    106918911 (itga4)
 09150 Organismal Systems
  09151 Immune system
   04672 Intestinal immune network for IgA production
    106918911 (itga4)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:pmei04147]
    106918911 (itga4)
   04515 Cell adhesion molecules [BR:pmei04515]
    106918911 (itga4)
   04090 CD molecules [BR:pmei04090]
    106918911 (itga4)
Exosome [BR:pmei04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   106918911 (itga4)
  Exosomal proteins of other cancer cells
   106918911 (itga4)
Cell adhesion molecules [BR:pmei04515]
 Integrins
  Integrin alpha subunits
   106918911 (itga4)
CD molecules [BR:pmei04090]
 Proteins
  106918911 (itga4)
SSDB
Motif
Pfam: Integrin_A_Ig_1 FG-GAP Integrin_A_Ig_2 Integrin_A_Ig_3 FG-GAP_3 DUF11 Integrin_alpha FG-GAP_2
Other DBs
NCBI-GeneID: 106918911
NCBI-ProteinID: XP_014844475
Ensembl: ENSPMEG00000012645
LinkDB
Position
Unknown
AA seq 1021 aa
MGVVFCLVPVQVLVLVLVCPAAGYNLDQEHSMVFKGPHSSMFGYSVLLHRHNSGKWLLVG
APVANSSRHLTQSPGAVFRCNIMDEKRRCDRLSAEISSCGKTCEPESDHQWLGVSLSRQP
GENGGRVLACAHRWKNVYYSRKDGQNNKLPNGACFRYESDLVSYQLFIPCYKDHQRKFGE
DYGSCQAGISNFLTQELIIVGAPGSSYWTGSVVVYNTSSNSMSVYQDDETGAVSYGSYLG
YAVGAGHFQSPSSIEVVGGAPQYNQKGKAFIFSTENSKMLQVVSEVTGHELGSYFGSSLC
VVDLNADGLSDLLVGAPMATGTSREEGRVHVYINQGEAQLKEAEFKLTGSDAYAARFGET
IADLGDLDDDGYPDVAVGAPQEDDLRGAVYIYNGRKEGISPKPSQRITGSSLGHDLKMFG
QSLNSGIDIDDNGYNDVAVGAFLSDSAVVLRTRPVVQVKASLIMPEHIDQRGAQCQDHKT
QTVCINVTICFSVTFKHHRGAIELQYNLTSDLLHKPSFPHRFYFHGNGSSNSTRGHMKAR
HGHPSCATHVAYQRKDVKDIYTPVQFEVSYGLSEKRSHKTPSRKLAFIKPILQHSAGHHN
TITNQTRFARSCSMANCSTNMQLSSELVLPQQQKFFALGSGQIVLKTSLLNSGDDAFLPR
VTLRFPNNIHYIKVLHNQEANVISCDVTEEVNTTDVKVDCRITSLVLPALSQVNISFLLD
VSQNSTPGDIHININTSSDNYETVEFLRDNTMTLVLPLKHGVGINIHGFVTPKSFVFDDE
DLIPADCYPEKFNYTFKVLNSGPSKALNTVVQIALPKILAPYPHRLLQLIDWKSSHGSCS
ISDKTISVNEDCNVPQASFIKQIIFFFSPTTTRTMFCGRVDNLCEQLVCRLGNLDAGRDA
TIQLEISLNPAVLLQAPGRHHVMMLESTATVLSPREDAHTVLIKDQPALVVVEAVFSQKP
SMAVKIFIIAVSLVLGLTILTALIWCLWKCGFFKRNFKKQEELNRDSWDYVPKLNKRESS
I
NT seq 3066 nt   +upstreamnt  +downstreamnt
atgggtgtcgtcttctgcctggttccagtccaggttctggtcctggttctggtctgtcct
gctgcaggttataatctggatcaggagcacagcatggtgttcaagggccctcactcctcg
atgtttggatactctgtgctgctgcatcgccacaactctggaaaatggctgctagtcgga
gctccagtggctaactcctctcgtcatctgactcaatctccaggagccgtttttcgctgc
aacattatggatgagaagcgccgatgtgatcgtctttctgctgaaatttcaagttgtggg
aagacgtgtgaaccggagagcgatcaccagtggctgggtgttagtttgtccagacaacct
ggagaaaatggtggacgtgtcctggcatgtgctcaccgctggaagaacgtgtattactca
aggaaagatggccagaacaacaagcttcctaatggcgcctgttttcgctatgagagtgac
ctggtatcctaccagctctttatcccttgctacaaagaccaccagaggaagttcggtgag
gattacgggtcatgtcaggcgggcatttccaatttcttgacacaggaactgatcatcgta
ggagctccaggatcttcttactggaccggctcggttgtggtctacaacacctccagcaac
tcgatgtcggtgtatcaggatgacgagacaggagctgtcagctatgggagctacctgggt
tacgctgtaggagccggtcacttccagagtccctcttccatagaggtggtgggtggagct
ccacagtacaatcagaagggcaaggccttcatcttctcaacagagaacagcaaaatgctg
caggtggtttcagaagttactggacatgaactggggtcttatttcggctccagtctttgt
gtggtggatctgaatgctgatggattgtcggacctgctggttggtgctcccatggcaaca
gggacctccagggaggagggaagagttcatgtgtacatcaatcagggggaggcgcagctg
aaggaggcggagtttaagctgactggcagcgatgcgtatgcggcgcggtttggagagacc
attgctgaccttggagacctggatgatgatggctatccagatgtggctgttggcgctcca
caggaagacgacctcagaggcgccgtctacatctacaatggcaggaaggagggtatttca
ccaaaaccatcacagaggattacagggtcatccctaggccatgacctgaagatgtttgga
caatcgctgaactctgggattgacatcgatgataacggctacaacgacgtggcggtggga
gctttcctttcagactcagctgtggttctcaggacccgtccagtggttcaagtgaaagct
tctctgattatgcctgagcatattgaccagcggggggcgcaatgccaagatcacaagact
cagaccgtctgcatcaacgttacgatctgcttcagtgtcacatttaaacaccacagaggg
gcaatagagcttcagtataatttgacctccgacctcctccataaaccatcgttccctcat
cgtttctatttccacggcaacggatcatcgaacagcacgaggggtcatatgaaggcacga
cacggccatcccagctgtgcaacacatgtggcttaccaaaggaaagacgttaaagacatc
tataccccagttcagtttgaagtttcctatggcctcagtgaaaagaggagccacaaaacc
ccatccagaaaattagcattcataaaacccattctgcagcacagcgcaggacatcataac
accatcaccaatcagactcggtttgctcgctcttgctctatggcgaactgttcgaccaac
atgcagctgtcgagtgaactagtgctgccacaacagcagaagttctttgctctcggttcg
ggacaaattgtcctgaaaacctccctgctgaactccggagacgatgccttcctgcctcga
gtgacactgagattcccaaacaacatccactacatcaaagtgctgcataatcaggaggcc
aacgtcatcagttgtgatgtcactgaggaagtgaacactacagacgtgaaggtggactgc
agaatcaccagcctcgtcctcccagccctatctcaggtgaacatcagttttctgttggat
gtcagtcagaacagcacgcctggtgacattcacattaacatcaacaccagcagtgataat
tacgagacggttgagtttctccgagataacaccatgacgcttgttcttcctttgaaacat
ggagttggtatcaacatccacggttttgtgactccaaagtcttttgtgtttgacgatgaa
gacttgattccagctgattgctaccctgaaaaattcaactacacatttaaggtgttaaac
tctggacccagcaaggcgttgaacaccgtggttcagattgcgctgccaaaaatcctggca
ccgtacccacacagactgcttcagctcatcgactggaagtcatcacatggttcgtgctca
ataagtgacaaaacgatttcagtcaatgaggattgcaacgttcctcaggcttcattcatc
aaacagatcattttcttcttctctcccaccaccacccgcacaatgttctgtggccgcgtc
gataatctgtgtgagcagctggtgtgtcgtcttggtaacctggatgcgggcagagatgct
accatccagctggagatcagcctgaatcctgctgtgctgctgcaagcaccgggccgtcat
catgttatgatgctggagagcacggcaactgtgttgtcgcccagagaagatgctcacact
gtcctaatcaaggatcaacctgcactggtggtggtggaagctgttttttcccagaaacct
tcaatggctgtgaagattttcatcatcgccgtcagtttagttttaggactgaccatcttg
actgctctcatctggtgtttgtggaagtgtggcttctttaagaggaacttcaagaagcag
gaggagttaaacagagacagctgggactatgttcccaaacttaacaagagggagagctct
atttaa

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