Poecilia mexicana (shortfin molly): 106918959
Help
Entry
106918959 CDS
T08022
Name
(RefSeq) probable ATP-dependent RNA helicase DDX5
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
pmei
Poecilia mexicana (shortfin molly)
Pathway
pmei03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pmei00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
106918959
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pmei03041
]
106918959
03009 Ribosome biogenesis [BR:
pmei03009
]
106918959
Enzymes [BR:
pmei01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
106918959
Spliceosome [BR:
pmei03041
]
Complex A
U1 snRNP components
U1 related factors
106918959
Complex B
106918959
Ribosome biogenesis [BR:
pmei03009
]
Eukaryotic type
Pre-60S particles
Helicases
106918959
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Helicase_C_2
Cas3-like_C_2
BNIP2
Motif
Other DBs
NCBI-GeneID:
106918959
NCBI-ProteinID:
XP_014844549
Ensembl:
ENSPMEG00000011703
UniProt:
A0A3B3X454
LinkDB
All DBs
Position
Unknown
AA seq
637 aa
AA seq
DB search
MPGFSDRDRGRDRGYGGGPPRFGGGGGGNRGGPPPGKFGNPGERLRKRHWNLDELPKFQK
NFYQEHLDVTHRPLQEVEEYRRSKEVTVKGRDCPKPIVKFHEAAFPSYVMDVIVKQNFTE
PTPIQSQGWPVALSGKDMVGIAQTGSGKTIAYLLPAIVHIQHQPFLEHGDGPICLVLAPT
RELAQQVQQVTAEYGRASRLKSTCIYGGAPKGPQIRDLERGVEICIATPGRLIDFLECGK
TNLRRCTYLVLDEADRMLDMGFEPQIRKIVEQIRPDRQTLMWSATWPKEVRQLAEDFLKD
YVQINIGALQLSANHNILQIVDVCNDLEKEDKLIRLLEEIMSEKENKTIIFVETKRRCDE
LTRRMRRDGWPAMGIHGDKSQQERDWVLNEFRFGKAPILIATDVASRGLDVEDVKFVINY
DYPNSSEDYIHRIGRTARSQKTGTAYTFFTPNNMKQASDLISVLREANQAINPKLIQMAE
DRGGRGRGGRGGYRDDRRDRYSGGRSNFGGGGGYRDRDGDRGFGNGPKTAFGGSKAQNGG
NYGGNNSNSSGNYGNSNYSNSNGQGNFSAPPNQGGGAGGFGNQNFQGPPQFGGMQRPAQN
GVNHPPFPFNSQPPPQNQQPPPPPPMVPYPMPPPFPQ
NT seq
1914 nt
NT seq
+upstream
nt +downstream
nt
atgcctggcttttcagacagagaccggggcagagatagagggtatggtggcggccctcct
cgtttcggtggcggtggaggaggcaacaggggaggacctcctcccggaaagtttggaaac
cccggagaacggctgaggaagagacactggaacctggatgagcttccaaagtttcagaag
aacttctaccaggaacacctggacgtcacacacagacctctgcaagaggttgaagagtat
cggagaagcaaagaagtcacagtgaaaggcagagattgtcccaaaccaattgttaaattc
catgaagctgcttttccaagctacgtcatggatgttattgttaagcagaacttcactgaa
ccgactccaatccagtcccagggctggccagtcgctctgagtggcaaagacatggtgggc
atcgctcaaactggctctgggaaaaccattgcttatcttctgccagcgattgttcacatc
caacatcagccgttcctggagcacggagacggacccatttgcttggttctggcgccgacc
cgggagctggctcagcaggtgcaacaagtgactgctgaatatgggagggcttctcgtctc
aagagtacctgcatctacggtggcgcgcctaaagggccacagataagggacctggagagg
ggagtggagatttgcatcgctactccaggccgtctcatcgattttctggagtgtggtaaa
accaatctgcgtcgttgcacctaccttgtgctggatgaagctgaccgcatgctggacatg
ggctttgaaccgcagatccgcaaaatagtggaacaaattcggcctgatcgtcagactctg
atgtggagcgccacctggcccaaagaggttcgtcagctggctgaggacttcctgaaggat
tacgtccagatcaatattggtgcattgcagctcagtgccaatcataacatcctgcagata
gttgatgtctgcaatgacctggagaaggaggacaagctgatccgtttgttggaggagata
atgagcgaaaaggagaacaagaccatcatctttgtggagaccaaaagacgttgtgatgaa
cttaccaggagaatgagaagagatgggtggccagcaatgggtatccatggagacaagagc
cagcaagagagggactgggttcttaatgagttcagatttggcaaagctccaattctgatt
gctacagacgtggcctcccgtggtttagatgtggaggatgtgaaatttgtcatcaattat
gactaccctaactcctccgaggactatatccaccgcattggccgcacggcccgcagtcaa
aaaacgggcacagcctacaccttcttcacccccaacaacatgaaacaggccagcgacctg
atctctgtgctgcgcgaggctaaccaggccatcaatcccaagctcatccagatggcagag
gacagaggaggtcgcggacgggggggaagaggtggctacagggatgaccgtcgcgatagg
tattcaggcggcagaagtaacttcggtggcggaggcggctacagggacagggacggcgat
agagggttcggcaacgggccgaaaactgcctttgggggaagcaaagcccaaaacggtggg
aattatggaggcaacaatagcaattctagcggtaactatggcaacagcaattacagcaat
agtaacggacagggtaactttagcgcgccaccaaaccaaggcggcggcgctggcggcttc
ggtaaccagaacttccaaggcccccctcagtttggcggcatgcagaggcccgctcagaac
ggcgtgaaccacccgccgttccccttcaactctcagccgccgccacagaaccaacagccg
ccgccaccgccaccaatggtgccctacccgatgccgccgccattccctcagtaa
DBGET
integrated database retrieval system
