Poecilia mexicana (shortfin molly): 106919000 Help Entry 106919000         CDS       T08022                                  Symbol vps39 Name (RefSeq) vam6/Vps39-like protein   KO K20183   Vam6/Vps39-like protein vacuolar protein sorting-associated protein 39 Organism pmei  Poecilia mexicana (shortfin molly) Pathway pmei04140   Autophagy - animal pmei04142   Lysosome biogenesis pmei04148   Efferocytosis pmei05132   Salmonella infection Brite KEGG Orthology (KO) [BR:pmei00001]  09140 Cellular Processes   09141 Transport and catabolism    04142 Lysosome biogenesis     106919000 (vps39)    04140 Autophagy - animal     106919000 (vps39)    04148 Efferocytosis     106919000 (vps39)  09160 Human Diseases   09171 Infectious disease: bacterial    05132 Salmonella infection     106919000 (vps39)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04131 Membrane trafficking [BR:pmei04131]     106919000 (vps39) Membrane trafficking [BR:pmei04131]  Endosome - Lysosome transport   Tethering complex    Hops complex     106919000 (vps39) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  Vps39_1 CNH zf-Vps39_C TPR_Vps41 Clathrin VPS18_solenoid_2nd Beta-prop_RIG_2nd Motif Other DBs NCBI-GeneID:  106919000 NCBI-ProteinID:  XP_014844607 Ensembl:  ENSPMEG00000018071 UniProt:  A0A3B3XKD9 LinkDB All DBs Position Unknown AA seq 876 aa AA seqDB search MHDAYEPVPILEKLPLQIDCLAAWEDWLLVGTKPGHLLLYRIKKDAATNRFEVTLEKSNK NFSKKIQQLYVVSQYKILVSLLENNIHVHDLLTFQQITVVSKAKGATLFACDLQQTSSGE ESLRMCVAVKRKLQLYYWKDREFHELQGDLGVPDVPKSMAWCENSICVGFKRDYYLIRLD GRGSIKELFPTGKQLEPLVAPLADGKVAVGQDDLTVVLNEEGVCTQKCALNWTDIPIAME HQPPYIIAVLPRYVEIRTLEPRLLVQNVELQRPRFIASAGPNIVYVASNHFVWRLVPVSI ASQIQQLLQDKQFELALQLAKMKDDSDGEKKQQIHHIQNLYAFNLFCQKKFDDSMQVFAK LGTDPTHVIGLYPDLLPSDYRKQLHYPNPLPGLSGAELEKAHLALIDYLTQKRTHLAKQL NDTSPSTTSPLMEGTPTIKSRKKLLQIIDTTLLKCYLHTNVALVSPLLRLENNHCHIEES EFVLKKTQKYSELIILYEKKGLHQKALMVLLDQSTKANSPLKGHERTVQYLQRLGSENLG IILEFSPWVLKICPEDGLKIFTEDLPEVETLPRDKVLQFLKEGFVELAIPYLEHIIYVWD EKGPEFHNVLIQLYLSRVQGLMKQYLNSLPEGVPAVPAGQEQGELGEFRNKLLSFLDIST SYEPARLISDFPFDGLLEERALLLGRMGKHEQALFIYVHVLNDTRMAEEYCHRHYNSSME GNKDVYLSLLRMYLSPPDAHCLGPIKMELTEPQANLQAALHVLELHHSKLNTTKAINLLP ANTQIREIKVFLESVLEEKAQMKRCNQVLKSLLQAEFLRVQEERIFHQQVKCVITEEKTC RVCKKKIGNSAFARYPNGVVVHYFCCKDRSVCPTEQ NT seq 2631 nt NT seq  +upstreamnt  +downstreamnt atgcatgacgcgtatgagccagtgcctattttagagaagcttcctcttcagatcgactgt cttgcggcttgggaggattggctgcttgttggcacaaaaccaggacatcttctcctgtac agaatcaagaaggatgcagccaccaaccggttcgaggtgactttggaaaagtctaataag aacttctccaagaaaattcaacagctatacgtcgtttctcagtataaaattctcgtcagt cttttggagaacaacatccacgtccatgacctcctgacctttcagcagatcactgtggtg tctaaagccaaaggagccacgctgtttgcgtgtgacctgcagcaaacgagctctggggag gaaagcctccgcatgtgtgtggcggtgaaaaggaaactgcagctgtattactggaaggat agagagttccatgagctgcagggcgacttgggtgtgccagatgttcctaagtccatggcc tggtgtgaaaactccatctgtgtcggcttcaagcgggactattacctcattcggctggat ggccgcggctccatcaaggagctcttccccactgggaaacagttggagcctctagttgcc ccgctggctgatgggaaggtggctgttgggcaggacgacctcaccgtggtgcttaacgaa gaaggagtttgcacccagaagtgcgccctgaactggaccgatatccccatcgccatggag caccagcctccctacatcattgcggtcctccctcggtatgtggagatacggaccttagag ccacggctgctggtgcagaatgtggagctgcaaaggccgcgcttcatcgcctcagcaggg ccaaacatcgtgtacgtcgccagcaaccactttgtctggcgcctggtgccggtgtcgatc gccagccagatccagcagctactccaggacaagcagttcgagctcgctcttcagctggcg aaaatgaaggacgattcagacggtgaaaagaagcagcagattcatcacatccagaatctt tacgccttcaacctgttttgccagaagaagtttgacgactccatgcaggtgtttgctaaa cttggcacagatcccacgcatgtgatcggactttacccggacctgctcccatcagactac cgcaaacagctgcattaccccaaccctctgcccggcttgtctggggccgagctggagaag gctcatctggctcttattgattacctcacccagaaacgcacccatcttgccaaacagctg aacgacaccagcccgtccacaacgtctccgctcatggagggaacgccgaccatcaagagc cgcaaaaaactcctgcagatcatcgacaccacgctgctcaaatgttatctgcacaccaac gtggccctcgtctctccgctccttcgactggagaacaaccactgccacatcgaggagagt gagttcgtcctgaagaagacccagaagtacagcgagctcatcattctctacgaaaagaag ggcttgcaccagaaagccttgatggtcctgctggaccaatccaccaaggccaattctcct ctgaaaggtcacgagcgaaccgtacagtacctccaacgactaggatcagagaatctgggg ataatcttggagttttctccctgggtgcttaaaatctgtcctgaggacggcctgaagatc ttcactgaagatctgcccgaggtggagactttgcccagagacaaagtgctgcagttcctg aaggaaggcttcgtggagctggccatcccgtatttggagcacatcatttacgtgtgggac gagaagggccccgagtttcataatgtgcttattcagctgtatctgagcagggtccaaggc ctgatgaagcagtacctcaactcactgccagaaggggttcctgccgtccctgccggccag gagcaaggtgaactgggagagttcaggaacaaactgctgtcttttctggatatttccacc agctatgaacctgccagactcatcagcgacttcccatttgatgggctgctggaggaacgg gctctgctcctgggtcgcatgggaaaacacgagcaggcgcttttcatatacgttcacgtt ctgaacgacacccgcatggccgaggaatactgtcaccggcattataacagttcaatggaa ggaaataaagatgtttatctgtctctgctgcggatgtacctgtccccccccgacgcccac tgcctggggcccattaagatggagctcactgagcctcaggccaacctgcaggcagccctg catgtcctggagctgcaccacagcaagctcaacaccaccaaggctatcaatctgctccca gcaaacactcagatccgggagataaaggtcttcctggagagcgtcctggaggagaaggcc caaatgaaacgctgcaaccaggtgttgaagagtctgctgcaggccgagttcctcagggtg caggaagaacgaatcttccaccagcaggttaaatgcgtcataacagaagaaaaaacctgc agagtctgtaagaagaagataggaaacagtgcgtttgccaggtatcccaacggcgtggtg gttcactatttctgctgcaaagatcgcagcgtgtgtcccaccgagcagtaa

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