Poecilia mexicana (shortfin molly): 106919284
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Entry
106919284 CDS
T08022
Name
(RefSeq) aprataxin-like
KO
K10863
aprataxin [EC:
3.6.1.70
3.6.1.71
3.6.1.72
]
Organism
pmei
Poecilia mexicana (shortfin molly)
Pathway
pmei03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pmei00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
106919284
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pmei03400
]
106919284
Enzymes [BR:
pmei01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.1 In phosphorus-containing anhydrides
3.6.1.70 guanosine-5'-diphospho-5'-[DNA] diphosphatase
106919284
3.6.1.71 adenosine-5'-diphospho-5'-[DNA] diphosphatase
106919284
3.6.1.72 DNA-3'-diphospho-5'-guanosine diphosphatase
106919284
DNA repair and recombination proteins [BR:
pmei03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Other BER factors
106919284
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Other NHEJ factors
106919284
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DcpS_C
FHA_2
zf-C2HE
HIT
FHA
zf-C2H2_6
SNCAIP_SNCA_bd
zf-C2H2_4
Motif
Other DBs
NCBI-GeneID:
106919284
NCBI-ProteinID:
XP_014845008
Ensembl:
ENSPMEG00000019789
UniProt:
A0A3B3XPM5
LinkDB
All DBs
Position
Unknown
AA seq
333 aa
AA seq
DB search
MPICWLVSEEGTHKPIQLPHLRAVVVGRGPETTIKDKKCSRQQVELKAECNKGYVKVKQL
GLNPTSVDCVVVGKGNEVRIKPGQKLHVVNQLYPYTIQFKEDLTGHHSSIKSPREQTSEN
SDSQKNVQTLKAPKQKTNGSPSVCHGENTQKSENVGHWSQGLKTSMQDPQMQVYKDDKVV
VITDKYPKARYHWLVLPWQSIPSLKALRGEHCDLLRHMQQVADRMIQQCPDASTLRFRSG
YHAIPSMSHIHLHVISQDFDSPCLKNKKHWNSFTTEYFIDSDDVIQMLEASGKVTVKEGS
SELLKLPLRCHVCHKELLTIPSLKEHLKSHFPR
NT seq
1002 nt
NT seq
+upstream
nt +downstream
nt
atgcctatttgctggcttgtcagtgaagagggtacccataaaccaatccagttacctcat
ttacgtgcggttgttgttgggcgaggtccagaaacgacaattaaagacaagaaatgctct
cggcagcaagttgaactgaaagctgagtgcaacaaaggttatgtcaaagttaagcagctg
ggcttaaaccccacctcagtagactgtgtggtggtggggaaaggcaatgaggtcagaata
aaacctggacagaagctccatgttgtcaatcaactttacccgtacaccatacagttcaaa
gaagatctcactgggcaccacagcagcatcaaaagtccaagagagcaaacatcggagaac
agtgacagccagaaaaatgtccaaactctaaaagctccaaaacagaaaacaaatggctct
ccatcagtgtgtcatggagaaaacacacaaaaaagtgaaaatgtcggacattggagccaa
ggtctgaagacttcaatgcaagatcctcagatgcaggtttacaaggatgataaggttgtt
gtgattacagacaaataccccaaagctcgctaccactggttagtccttccatggcagtcg
attcccagcctgaaggctttacgtggagagcactgtgatcttctgagacacatgcagcag
gttgctgaccgcatgatccagcaatgcccagatgccagcacactgcggttccggtcaggt
taccacgctatcccaagtatgagtcacatccacctccatgtaatcagccaggactttgac
tctccctgcttgaagaacaagaagcactggaactcttttacaacagaatacttcatcgat
tctgatgatgttattcagatgcttgaagcaagtggaaaagtcactgttaaagaaggttcc
agtgaattgttgaaactacctctccgctgccatgtgtgccacaaagagcttcttacaata
ccttctctgaaggaacacttgaaatctcactttcccagataa
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integrated database retrieval system