Poecilia mexicana (shortfin molly): 106919490
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Entry
106919490 CDS
T08022
Symbol
cltc
Name
(RefSeq) clathrin heavy chain 1 isoform X1
KO
K04646
clathrin heavy chain
Organism
pmei
Poecilia mexicana (shortfin molly)
Pathway
pmei04142
Lysosome biogenesis
pmei04144
Endocytosis
pmei05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
pmei00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
106919490 (cltc)
04142 Lysosome biogenesis
106919490 (cltc)
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
106919490 (cltc)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pmei04131
]
106919490 (cltc)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pmei04147
]
106919490 (cltc)
Membrane trafficking [BR:
pmei04131
]
Endocytosis
Clathrin-mediated endocytosis
Clathrin
106919490 (cltc)
Exosome [BR:
pmei04147
]
Exosomal proteins
Proteins found in most exosomes
106919490 (cltc)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Clathrin
Clathrin_propel
Clathrin_H_link
Clathrin-link
TPR_COPA_B
TPR_Vps41
Ig_TRAPPC10_3rd
Motif
Other DBs
NCBI-GeneID:
106919490
NCBI-ProteinID:
XP_014845365
Ensembl:
ENSPMEG00000013361
LinkDB
All DBs
Position
Unknown
AA seq
1686 aa
AA seq
DB search
MAQILPIRFQEHLQLQNLGINPANIGFSTLTMESDKFICIREKVGEQAQVVIIDMADPNT
PIRRPISADSAIMNPASKVIALKDAAKTLQIFNIEMKSKMKAHTMTDDVTFWKWISLNTV
ALVTDTAVYHWSMEGDSQPVKVFDRHSSLAGCQIINYRTDAKQKWLLLIGISAQQNRVVG
AMQLYSVERKVSQPIEGHAASFAQFKIEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTG
NQPFPKKAVDVFFPPEAQNDFPVAMQISAKHNVVFLITKYGYIHLYDLETGTCIYMNRIS
GETIFVTAPHDATSGIIGVNRKGQVLSVCVEEENIIPYINNVLQNPDLALRLAVRNNLAG
AEELFARKFNTLFAAGNYSEAAKVAANAPKGILRTPDTIRRFQSVPTQPGQTSPLLQYFG
ILLDQGQLNKFESLELCRPVLQQGRKQLLEKWLKEDKLECSEELGDLVKAVDPTLALSVY
LRANVPNKVIQCFAETGQFPKIVLYAKKVGYTPDWIFLLRNVMRINPEQGLQFAQMLVQD
EEPLADITQIVDVFMEYNLIQQCTSFLLDALKNNRPSEGPLQTRLLEMNLMHAPQVADAI
LGNQMFTHYDRAHIAQLCEKAGLLQRALEHYTDLYDIKRAVVHTHLLNPEWLVNFFGSLS
VEDSMECLRAMLSANIRQNLQICVQVASKYHEQLSTQSLTELFESFKSFEGLFYFLGSIV
NFSQDAEVHFKYIQAACKTGQIKEVERICRESNCYDPERVKNFLKEAKLTDQLPLIIVCD
RFDFVHDLVLYLYRNNLQKYIEIYVQKVNPSRLPVVVGGLLDVDCSEDVIKSLILVVRGQ
FSTDELVAEVEKRNRLKLLLPWLESRIHEGCEEPATHNALAKIYIDSNNNPERFLRENPF
YDSRVVGKYCEKRDPHLACVAYERGQCDQELINVCNENSLFKSLSRYLVRRKDAELWASV
LLESNPYRRPLIDQVVQTALSETQDPEEVSVTVKAFMTADLPNELIELLEKIVLDNSVFS
EHRNLQNLLILTAIKADHTRVMEYISRLDNYDAPDIANIAISNELFEEAFAIFKKFDVNT
SAVQVLIEHIGNLDRAYEFAERCNEPAVWSQLAKAQLQKELVKEAIDSYIKADDPSAYME
VVQAADKSGNWEDLVKFLQMARKKARESYVETELIFALAKTNRLAELEEFINGPNNAHIQ
QVGDRCYDEKMYEAAKLLYNNVSNFGRLASTLVHLGEYQAAVDGARKANSTRTWKEVCFA
CVDGQEFRLAQMCGLHIVVHADELEELINYYQDRGYFEELITMLEAALGLERAHMGMFTE
LAILYSKFKPQKMREHLELFWSRVNIPKVLRAAEQAHLWAELVFLYDKYEEFDNAIITMM
NHPTDAWKEGQFKDIITKVANVELYYKAVQFYLEFKPLLLNDLLMVLSPRLDHSRAVNFF
SKVKQLPLVKPYLRSVQNHNNKSVNEALNNLFITEEDYQALRTSIDAYDNFDNISLAQRL
EKHELIEFRRIAAYLFKGNNRWKQSVELCKKDKLYKDAMQYASESKDVELAEELLAWFLQ
ENKRECFAACLFSCYDLLRPDVVLETAWRHNIMDFSMPYFIQVMREYLSKVEAVKEKVDK
LETSESVRKEEEQATETQPIVYGTPQLMLTAGPSVPVAPQQAYGYGYQAPAGYAQPAAQP
GFGYGM
NT seq
5061 nt
NT seq
+upstream
nt +downstream
nt
atggctcagatccttcctattcgctttcaggagcatctacagctccaaaatttgggaatc
aatccagccaacataggcttcagcaccctgaccatggagtctgacaaattcatctgcatc
cgggagaaagtgggggagcaggcccaggttgtgatcattgacatggccgaccccaatact
ccgatccggaggcccatctcagccgacagcgccatcatgaaccccgccagtaaggtcatc
gcacttaaagacgcggccaaaacccttcagatctttaacatcgagatgaagagcaagatg
aaggcacacaccatgacagacgacgtgactttctggaagtggatctctctgaacacggtt
gctcttgtgactgacaccgctgtttaccactggagcatggagggcgactctcagcctgtc
aaagtttttgatcgccactccagcctggcaggctgccagatcatcaactaccgcaccgac
gccaagcagaaatggctcctcctcattggtatctcagctcagcaaaacagagtggtggga
gcaatgcagctgtactccgttgaaagaaaagtttctcagcccatcgaaggtcatgctgcc
agctttgcccagttcaagattgaaggaaacgcagaagagtcaactttgttctgctttgct
gtgagaggccaggctggaggaaagctgcacatcattgaggtgggaaccccaccaacaggt
aatcagccatttccaaagaaagcagtggatgtcttctttcctcctgaagcacagaatgac
tttcccgtcgccatgcagataagtgcaaagcacaatgtggttttcctcattaccaaatac
ggctacatccacctgtacgacctggagactggaacctgcatctacatgaaccgcatcagt
ggggagaccatcttcgtcacggcgccacatgatgccacctcaggcattatcggggtcaac
cgaaagggacaggtgctgtctgtctgcgtggaagaagaaaacatcattccatacatcaac
aacgtgctgcagaatccagatctcgccctccgcctggctgtccgcaacaacctggctgga
gctgaggagctctttgcacgcaagttcaacactctgtttgctgctggcaactactctgaa
gctgccaaagttgctgctaatgcaccaaagggaatccttcgcacaccggacaccatccgc
cgcttccagagcgttcccactcagccgggccagacctcccctttgctgcagtactttggt
atcctgttggaccagggccagctcaacaagtttgagtccctggagctttgcagacccgtc
ctccagcagggacgaaagcagcttctggagaagtggctgaaggaagacaagttggagtgt
tcagaggaactgggcgatctggtgaaggccgtggatccgaccttggccctcagtgtgtat
ctgcgggcgaatgtccccaacaaggtcattcagtgctttgcagagactggtcagttcccc
aaaatcgtcctgtatgccaaaaaggtgggctacaccccggactggatcttcctgctcagg
aacgtgatgcgcatcaacccagagcaaggcctgcagtttgcacagatgctggtccaggat
gaagagccattagcagacatcacacagattgtggacgttttcatggagtacaacctgatc
cagcagtgcacctctttcctcctcgacgctttaaagaacaacagaccgtcagaagggccg
ctgcagactcgcctgctggagatgaacctcatgcacgccccacaggtagctgatgctatc
ctgggtaaccagatgttcacacactatgaccgcgctcacatcgcccagctgtgtgagaag
gctggtcttcttcaaagggctctggagcactacacagacctgtatgacatcaagcgtgct
gtggtgcacacacacctcctcaaccctgagtggctggtgaacttcttcggctctctatcg
gtggaagattcaatggagtgcctcagggccatgctctcggctaacatccgccagaacctg
cagatctgcgtccaggtggcatccaagtaccatgaacagctctccactcagtctctcact
gagctcttcgagtccttcaagagcttcgaaggtttgttctacttcctgggctccattgtg
aacttcagtcaggatgccgaagtccacttcaagtacatccaagctgcctgcaagacgggc
caaattaaagaggtggagaggatctgcagagagagcaactgctacgacccggagcgcgtc
aagaacttcctcaaggaagccaaactcaccgaccagctgccgctcatcatcgtctgtgat
cgctttgactttgtccacgacctcgtcctctacctgtacagaaacaacttgcagaaatac
atcgagatttatgtccagaaggtgaaccccagccgtctcccagtcgttgtcggcggtctc
ctggacgtggactgctccgaggacgtcatcaagagtctgatcctggtcgtcagaggacag
ttctccacggatgagctggttgcagaggtggagaagaggaacagactgaagctgctgctg
ccctggctggagtcccgcatccatgaaggctgtgaagaacctgctacccacaatgctctg
gcaaagatctatatcgacagcaacaacaacccggaacgcttcctgcgggaaaacccgttc
tacgacagccgtgtggtgggaaagtactgcgagaagagagaccctcacctggcctgcgtg
gcctatgagcggggacagtgcgaccaggagctcatcaatgtttgcaatgagaactctctg
ttcaagagcttgtctcgctacctagtgagacgcaaagacgctgagctgtgggccagcgtg
ttgctggagagcaacccatacaggcggcctctcatcgaccaggtggtccagacggctctg
tcagaaacccaggaccctgaggaggtttcggtcaccgtcaaagccttcatgactgctgac
ctgcccaacgagctcattgagctgctggagaaaatcgtgttggacaactctgtcttcagt
gaacacaggaatctgcagaacctgctgatcctgaccgcaatcaaagccgatcacacgcgt
gtgatggaatacattagcaggctggacaactacgacgctcctgatatcgcaaacatcgcc
atcagcaatgagcttttcgaggaggcgttcgccatctttaagaagtttgacgtcaacacc
tcagctgtgcaggtgctcatcgagcacatcggcaacctggaccgggcctatgagtttgca
gaacgctgcaacgagcctgctgtgtggagccagttggccaaggctcagctccagaaggag
ctggttaaagaagccattgattcctacatcaaagctgacgacccgtctgcatacatggag
gtggtccaggcagctgataagagcggtaactgggaggatcttgtcaagttcctccagatg
gctcgcaagaaggcccgtgagtcctacgtggagaccgagctgatcttcgccttggccaaa
accaaccgcctggccgaactcgaggagttcatcaacggacccaacaacgctcacatccag
caggtcggcgaccgctgctacgacgagaaaatgtacgaagcggccaaactgctttacaac
aacgtctccaacttcggccgcctggcttccactctggtgcacctgggagagtaccaagcc
gccgtggacggagcccgcaaggccaacagcacccgaacctggaaggaggtgtgcttcgcc
tgcgtggacggccaggagttcagactggcccagatgtgcggcctccacatagtggtgcac
gctgatgagctggaggagctcatcaactactaccaggatcgtggctactttgaggagttg
atcaccatgctggaggcggcgctgggcctggagcgcgctcacatgggcatgttcacagag
ctggccatcctgtactcaaagttcaaaccccagaagatgagggagcacctggagctgttc
tggtcccgagttaacatcccgaaggtgctgagggcggcagagcaggcgcacctgtgggcc
gagctggtcttcctgtacgacaagtacgaggagttcgacaacgccatcatcaccatgatg
aatcacccaacagacgcctggaaggagggccagttcaaagacataatcaccaaagtggcc
aacgtagagctgtactacaaagccgtccagttctacctggagttcaagcctttgttactg
aatgatttgctgatggtgctctccccgagactggatcactctcgtgctgtaaacttcttc
tctaaggtgaagcagctgcctctggtcaaaccttacctccgctcagtacagaaccacaac
aacaaatctgtcaacgaagcacttaacaacctcttcatcacagaggaggactatcaggct
ctgaggacgtcaatagatgcctacgacaactttgacaacatctcgctggcccagcgtctg
gagaaacacgagctgattgagttcagaagaatcgccgcctacctcttcaaaggaaacaac
cgctggaaacagagcgtggagctgtgcaagaaggacaagctctacaaggatgccatgcag
tacgcgtcagagtccaaagacgtggagctggcagaggagctgctggcctggttcctgcag
gaaaacaagagggagtgtttcgccgcctgccttttctcctgctacgacctgctgcggccc
gacgtggtgctggagaccgcctggaggcacaacatcatggacttttctatgccatacttc
attcaggtcatgagggagtacctctccaaggttgaagcggttaaggaaaaggtcgacaag
cttgaaacctcagaatccgtaagaaaagaggaggagcaggcaacagagacgcaacccatc
gtctacggaacacctcagctgatgctgacagcaggccccagcgtccccgtggccccacag
caagcttacggctacggctaccaggcccctgcaggctacgcccagccagcagctcagcca
ggctttggctacggcatgtga
DBGET
integrated database retrieval system
