Poecilia mexicana (shortfin molly): 106920112
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Entry
106920112 CDS
T08022
Name
(RefSeq) ATP-binding cassette sub-family A member 1-like isoform X1
KO
K05641
ATP-binding cassette, subfamily A (ABC1), member 1
Organism
pmei
Poecilia mexicana (shortfin molly)
Pathway
pmei02010
ABC transporters
pmei04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
pmei00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
106920112
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
106920112
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pmei02000
]
106920112
Transporters [BR:
pmei02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
106920112
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
R1_ABCA1
AAA_21
AAA_23
Motif
Other DBs
NCBI-GeneID:
106920112
NCBI-ProteinID:
XP_014846420
Ensembl:
ENSPMEG00000014226
LinkDB
All DBs
Position
Unknown
AA seq
2392 aa
AA seq
DB search
MGFFRQLYLLLWKNVTYRRRNKIQLLIELLWPLFLFVILISVRHSHPPYKQGQCHFPNKA
LPSVGTVPWIQSIVCNINNPCFHSPTPGETPGQVGNFDNSILSRLFVDAQTVLSYSGNRS
VSSFQDLMGSVRLLGERFGSLPSLPVKEYLIPKETFSSFLLNNGNLSSSAVDQLMNARLN
FQALLTGVQMPLKVLVCNATLLGELLSVDGGAANMAALQNELCALPAGVLRDAERLFLSQ
LDMTKFLTRDRLIGSADELRIVSQAISSVSQELAVLIDDLSSLSSFAEMNAALSLLSPEN
RTALPRESFRAFSRIMCGHPKGGGERIPSLNWYEDNNIRSLLGRNDTEDVVLDTDNNTTP
FCKSLIQTLESNPLSRIVWRGIKPLFIGKLLYTPDTPVVRQVMKEVNKTFEDLQILQDLN
DAWMEVGPEIKNYMETSVEIQLLKNLLSRPEIAVLVNMRLENTTWTASRIVRFLSTPSPD
TPRKPGAPPTWLDIYNNIGNTIGTLSQVSKCFSLDKLEGLDSEGQLIDRALELLEDRQFW
AGVVFLLPNTSSSQLPPHVTYKIRMDIDDVTKTNKIKDRFWDPGPAADPFDDMRYIWGGF
VYIQDLVERAVNYVLTGVKQTTGIYVQQMPYPCYVDDVFLRVLNRSLPLFMTLAWIYSVA
MIIKGVVYEKEARLKETMRIMGLSTGTLWLSWFISSVVPFLISAVLLIGLLKWGDILPYS
DPTVVFFFLTAFATATIMQCFLISTFFSKANLAAACGGLIYFSLYLPYVLCVAWRDHLTT
THRVLASFLSPVAFGFGCEYFSQYEEQGVGIQWFNLRTSPVEGDSYSFTTSISMLYVDAF
IYAIAAWYIEAVFPGQYGIPRPWYFIFQLNYWGGIPLEAGMPIPPAPTHQDEDHIEAEPN
NMNLGVNIRNLVKIYKKGGKIAVNHLNLKFFEGQITSFLGHNGAGKTTTISVLTGLFPPT
SGTVYVKGMDIRYDMDIIRKTLGVCPQHNVLFDMLTVEEHVWFYGCLKGLPEEQVMAEMS
ALLEDVGLLHKRHDQTKNLSGGMQRKLSVAIAFVGGSKVVVLDEPTAGVDPYSRRGIWDL
LLKYREDRTIILSTHYMDEAELLGDRIAIISKGKLCCSGSPLFLKSKLGSGYYLTLVKRE
ELSTSTPSYSSICTSASTSTNKLPPLVKDSESSLSEDTGLGSEDTSSYMAALLALVQQHI
PGARLVEESRREAVINLPQAAAKDGSLGLFLSKLDERLPELGVSSYGLSDSTLEEIFLRV
AEETGVDADPASEQPAEEPSGPQPSRQKAQDPSAEEPEPGRKRLRKKEPKETDPLSEDGR
GGMPLTGWWLTWQQLRALFVKRWLYARRSRRGLFAQIVLPAVFVLIALLFSLIVPPFGKY
PPLELQPWMYGDQYTFFSNDDPGNPAMENLLEALLDQPGFGTKCMQREEQDDNKTNPQCE
PERGGLFMRPQLSFSTWQMLSQGNWTRGRPSPECQCSTEDSRRMLPDCPDGAGGIPPPQM
KRATGDILQNLTRHNISDYLVKTYPQILKKSLKTKKWVNEFRYGGFSLGGSSSQNVSQVQ
HLQDSIMAIRTRYQVEQGSSLDRLLKKLPGFLGEMHTVNNVKVWYNNKGWHAMVSFVNVM
NNGLLRASLPPGPERRRHGITVYNHPLNLTKEQLTEIAMMTTSVDVLVSICVIFAMSFVP
ASFVLFLIEERVSKAKHLQFVSGVKPILYWLANFAWDMLNYSVPAMMVVLIFISFQQQSY
VSDTNLPALILLLLLYGWSITPLMYPASFVFSVPSTAYVVLTSINLFIGINGSIATFVLE
LFVDKHLNEVNRILKKVFLIFPHFCLGRGLIDMAKNQALADAFQRLGSKPTLHPLQWDFV
GKNLFAMAAEGVIFFIFTILLQYKFFIHFRPWWNDPQLPPLGPEDEDVARERERVKSGKA
QTDILTMIDLSKVYKAGKKPAVDRLCLGIPRSECFGLLGVNGAGKTSTFRMLTGDTPITH
GEAFLNQHSVQTEMERVHQLMGYCPQFDAISDLLTGREHLELYARLRGVPEDSVGKVAQW
GVKKLGLTQYAGQEAGGYSGGNKRKLSTAISLIGAPPVIFLDEPTTGMDPKAKRFLWNCI
LSVTKEGRAVVLTSHSMEECEALCTRMAIMVNGRFQCLGSVQHLKNRFGDGYTIILRLAD
TKPDAESCPIDAYMRTSFPVIELKERHQSILQYQLPSHACCLARVFDVLANNYEELGVVD
FSVSQTTLDQVFVNFAKEQTDDDCLTDVIISNGVAQLNLPARINPFAVKPQQPPTPPQLR
KSPQLPAKSPDGNPKEPKPKKPKARKVSSNGETSGGVPMSRSPQGEEVGPEVGSSNGGLQ
GESSKPHRSKHREESSSKDPATLFIVGSNSQESSLFIHLNAAEFTRTLWSQK
NT seq
7179 nt
NT seq
+upstream
nt +downstream
nt
atggggtttttcaggcagctctaccttctcctctggaaaaatgtcacgtaccgcaggcgg
aataagatccagctgttgatcgagctcctctggcctctcttcctctttgtcatcctcatc
tctgttcgtcattcacaccctccttacaaacaaggccaatgtcacttcccaaacaaagcg
ttgccgtctgtcggcaccgttccctggattcaaagcatcgtctgcaacatcaacaacccc
tgcttccacagcccaacgccgggggaaacgccgggccaagtgggaaacttcgacaactcc
atactgtctcgtctttttgtggatgctcagacggttttgtcctacagtggaaatcggagc
gtctccagttttcaggacctgatgggaagtgtccggctcctgggggaaagatttgggtcg
ctgccaagtctccctgttaaagaatacctgatacccaaggagacgttctccagttttctc
ctgaacaacggaaacctgtcgtcttcagctgtggaccagctgatgaacgctcgccttaat
tttcaggctttgctgactggagtccagatgccgctgaaagtcttggtgtgcaatgcaacc
ctgctgggagagctgctgtctgtggacggaggagccgccaacatggcggctcttcagaac
gagctttgtgcgcttcctgctggtgtcctgcgtgacgctgagcgcctcttcctctctcag
cttgacatgaccaagttcctcacaagagaccgtctaattggcagcgccgatgagctcagg
atcgtcagtcaggccatcagctcggtttcccaggagctcgctgtcctcatagacgatttg
tcctccctttccagttttgcagaaatgaacgcggctcttagtcttctgtctcctgaaaac
cgcacagctctgcccagggaaagcttcagagctttttcaaggatcatgtgcggccatccc
aaaggtggcggtgaacgcatcccgtcgctcaactggtatgaagacaacaacatcaggtcg
ttgttaggcagaaacgacacggaggacgtggtgctggacaccgacaacaacacaacacct
ttttgcaaaagtttgattcaaaccctggagtcgaatcctctttctcgcatcgtgtggcga
ggaattaaacctctgttcatcgggaagctgctgtacacaccggacactcctgtagttcga
caagtcatgaaagaggtgaacaaaacatttgaagacctccagattcttcaggatctgaat
gatgcctggatggaggtgggaccagaaatcaagaactacatggagaccagtgtggagatt
cagctgctgaagaatttgctgagccgtccagaaattgcagtcttggtgaacatgcgtttg
gaaaacacaacgtggacggcgtcgcggattgttcgtttcctgtccacgccgtcgccggac
acgccgaggaaacctggagccccgccgacctggctggacatctacaacaacattggaaac
accatcggcacgctttcacaagtctccaagtgtttcagtttggacaagctggagggtctg
gactcggagggtcagctgatcgacagagctctggagctgctggaggacaggcagttttgg
gcaggtgtggttttcctgctgcccaacacgtcctcgtcgcagctcccgccccacgtcacc
tacaagattcgaatggacatcgatgatgtgaccaagaccaataagattaaagacaggttt
tgggatccgggtccagctgccgacccgttcgacgacatgcgctacatttggggcggtttt
gtctacattcaggacctggtagagagagctgtgaattatgtcctaactggagttaaacag
accaccggcatctacgtccagcagatgccatatccctgttatgtggatgatgtcttcctt
cgagtgctgaaccgctccctgcctctcttcatgactctggcgtggatctactcggtggcc
atgatcattaaaggcgtggtgtatgagaaggaggcccggctgaaggaaaccatgaggatt
atgggtctcagcacaggaacgctgtggctcagctggttcatcagcagcgtcgtccccttc
ctgatttctgctgtgctgctcattggcctccttaagtggggggatattttgccttacagc
gacccgactgtggtcttttttttcctcacggcgtttgctaccgccaccatcatgcagtgt
ttcctcatcagcacctttttctccaaagccaacctggctgctgcctgtggagggctcatc
tacttcagtctctacctgccctatgtgctgtgtgtcgcctggagagatcacctcaccacc
acacacagggtcttagctagtttcctgtctcctgtggcctttggttttggctgtgagtat
ttctctcagtacgaggagcaaggcgtggggatccagtggttcaacctgcggaccagccct
gtggaaggagactcgtacagcttcaccacctccatatccatgctttacgtagacgccttc
atctacgccattgcagcctggtacattgaagcagtgtttcctggtcagtatggcatcccc
aggccttggtacttcatctttcagctcaactactggggtgggattcctttggaagcaggc
atgccgatccctccagctcccacccatcaggatgaagatcacattgaagcagaacccaac
aatatgaatcttggcgtgaacatcagaaatttggtaaaaatctacaagaagggagggaag
attgctgtcaaccatctaaatctgaagtttttcgaggggcagatcacctccttccttggc
cacaacggagccggcaaaaccaccaccatatccgtcctgactgggctgttcccgcccacc
tctgggaccgtgtacgtgaagggcatggacatccgctacgacatggacatcatccggaag
acgctgggagtttgtccgcagcacaacgtcctctttgacatgctgacagtggaggagcat
gtgtggttttatggctgcctgaagggtttgcctgaagaacaggtgatggctgaaatgagc
gctctgttggaggacgtcggcctcttgcacaagcgtcatgatcagaccaaaaacctctct
ggtggaatgcagaggaagctttctgtggcaatcgcatttgttggcggctccaaagtggtc
gtcctggatgagcccacagctggcgtcgacccgtactcccgcagagggatctgggatctg
ctgctcaaatatcgcgaagatcgaaccatcattctgtccactcactacatggacgaggcg
gagctgcttggtgaccgcatcgccatcatctccaaggggaaactctgctgcagcggatcg
ccgctcttcctcaaatccaagctgggatctggttactacctgaccttggtgaagagggag
gagctaagcaccagcactcccagttattccagtatctgcaccagtgccagcactagcacc
aacaagctacctcctttagtaaaggacagtgagtcgtcactgagtgaagacaccggactg
ggaagtgaggacaccagttcctacatggcagctctgctggcgctggtgcagcagcatatt
cctggcgccaggttagtggaggagtctagaagagaagccgtgatcaacctcccgcaagca
gccgccaaggacggcagtctgggcctcttcctctccaaactggacgagcggcttccagag
ctgggcgtcagcagctacggcctgtcagacagcacgctggaggagatctttcttcgagtg
gcggaggaaaccggagtggatgctgatccagcatcggagcagccagcagaagagcccagt
ggcccgcagccatcgaggcaaaaagctcaggatccatctgctgaggaaccagaaccagga
aggaaaagacttcgtaagaaagaaccgaaggagacggacccgctgagtgaagacgggcga
ggcgggatgccgctgaccggctggtggctgacgtggcagcagctccgagcgctcttcgtc
aaacgctggctgtacgctcgacggagccgccgggggctcttcgctcagattgttctgccg
gctgtgtttgtgctgatcgctctgctcttcagcctcatcgttcctccgttcgggaagtac
ccccccctggagctgcagccctggatgtatggagatcagtacaccttcttcagcaacgac
gatcctggcaacccagccatggagaacctgctggaggctctgctggaccagccgggtttt
ggcaccaagtgcatgcagagagaagagcaggacgacaacaaaacgaatcctcagtgtgaa
cctgagagggggggcctcttcatgcggccccagttgtcgttctccacctggcagatgctg
agccaaggcaactggaccagaggcagaccttccccagaatgtcagtgcagcacggaggac
tcccgccggatgcttccggattgcccggacggcgccggtgggattccccctccacagatg
aagagagccactggggatattctccagaatctgacgaggcataacatctcagattacctg
gtgaagacttacccgcaaatcctcaagaaaagccttaaaaccaagaagtgggtgaacgaa
ttcagatatggaggcttctctctcggaggcagcagcagccagaatgtctctcaggtccag
catctccaggactccatcatggcaatcaggactcgataccaagtagaacagggcagttca
ctggatcggctgctgaagaagctgccggggtttttgggagaaatgcacaccgtaaacaac
gtcaaggtgtggtacaacaacaagggctggcacgccatggtgtcgtttgtgaacgtgatg
aacaacggcctgctgagagccagtctgccgcccggaccggagcggaggagacacggcatc
accgtctacaatcacccgctcaacctcaccaaggagcagcttactgaaatagcaatgatg
acgacctcagtggacgttctggtttccatctgtgtaatcttcgccatgtccttcgtgccg
gccagttttgttctcttcctgattgaggagcgagtcagtaaagccaaacatttgcagttt
gtcagtggagtgaagccaatcctgtactggctggccaacttcgcctgggacatgctgaac
tattctgtcccggccatgatggttgtgctgatcttcatcagttttcagcagcagtcctac
gtgtccgacaccaacctgccggctctgatcctcctgctgctcctctacgggtggtccatc
actcctctgatgtacccagcatcctttgttttctccgttccaagcacggcttatgtcgtt
ctgacttccatcaacctcttcatcggcatcaacgggagcatcgccaccttcgtcttggag
ttgtttgtagataagcatctgaacgaggtcaacaggatcttaaagaaagtgtttttgatt
ttcccacatttctgcctgggtcgaggtctcatcgacatggctaaaaaccaagccctggcc
gacgccttccagagactgggaagcaaaccgactcttcaccctctacagtgggactttgtt
gggaagaatctgtttgcgatggcagctgaaggcgtcatcttcttcatcttcaccatactc
ctgcagtacaagtttttcattcacttcaggccgtggtggaacgatcctcagcttcctcct
cttggtccagaggatgaagacgtagcgagagaacgtgagcgagtgaaaagtggcaaagcc
cagactgatatcctcaccatgattgatctgagcaaggtttataaagctggaaaaaagcca
gctgtagatcgactttgcctcgggattccccgcagtgagtgtttcggcctgcttggcgtg
aacggagcagggaagacatccacgtttcgcatgctgactggagacacacccatcacacac
ggagaggctttcctcaaccagcacagtgtgcagacggagatggagcgcgtccaccagctg
atgggctactgtccgcagtttgatgccatcagtgacctgctgacgggtcgggagcatctg
gagctctacgctcggctcaggggggttccagaggattctgttggcaaagtggcgcagtgg
ggggtgaagaagctggggttgacccagtacgcagggcaggaggctggaggatacagcgga
ggcaacaagaggaaactttccacggccatctccctgatcggagcgcctcctgttatattc
ctggatgagcccaccactgggatggacccaaaggccaaaagatttttgtggaactgcatc
ctgagtgtcacaaaagaaggcagagccgtcgtcctcacgtctcacagcatggaggagtgt
gaggctctttgcaccaggatggccatcatggtgaacggcagatttcagtgtctgggatcc
gtgcagcacctcaagaaccgattcggagacggatacaccatcattctccgtctggcggac
accaaaccggacgccgagtcttgtcccattgacgcctacatgaggacgtcgtttcccgtc
atcgagctgaaggagcggcaccagagcatcctgcagtaccagctgccatcgcacgcctgc
tgcctggcccgcgtctttgacgttctggccaacaactacgaggagctcggcgtcgtggac
ttctccgtctcgcagaccaccctggatcaggtgtttgtcaactttgcgaaggagcagact
gatgacgactgcctgactgacgtgatcatcagtaacggcgtggcgcagctaaaccttccc
gccagaataaatccttttgccgtcaaaccccaacaacccccaacaccacctcagctgagg
aaatccccacagcttcctgccaaatcacccgacggcaatccgaaagaacccaagccgaaa
aagcccaaggccagaaaggtcagttcaaacggggagacgagcggcggcgtgcccatgagc
agatcacctcagggagaggaagtcgggccggaggtgggcagcagcaacggaggacttcag
ggggagtccagcaaacctcaccggtcgaaacacagagaggagagctccagcaaagacccg
gctacgctcttcatagtcggcagcaactcacaggaaagctcgctgttcattcacctgaat
gctgcagagttcacacgaactctctggagtcagaagtga
DBGET
integrated database retrieval system
