Poecilia mexicana (shortfin molly): 106920355
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Entry
106920355 CDS
T08022
Name
(RefSeq) collagen alpha-1(XIV) chain-like
KO
K08133
collagen type XIV alpha
Organism
pmei
Poecilia mexicana (shortfin molly)
Brite
KEGG Orthology (KO) [BR:
pmei00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
pmei00535
]
106920355
Proteoglycans [BR:
pmei00535
]
Extracellular matrix (ECM) proteoglycans
Others
106920355
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
VWA
Collagen
VWA_2
VWA_3
fn3
Motif
Other DBs
NCBI-GeneID:
106920355
NCBI-ProteinID:
XP_014846794
LinkDB
All DBs
Position
Unknown
AA seq
930 aa
AA seq
DB search
MSGVCAQWVPHQHASTYRLVIQSVTGSQKQETKLDGGASRHCFSSLKPNMEYKISIFSQL
QDGTEGPAVTANVKTLPIPTPAPAKRPTTTPPPTIPPAKEVCKAAKADLVFLVDGSWSIG
DDNFLKIIRFLYSTVGALDRIGPDGTQVAIAQFSDDARTEFKLNSYGNKERLLDAINKIS
YKGGNTKTGRAIQHVKENIFTAEGGVRRGIPNVLVVLTDGRSQDDVNKVSKEMQMSGYIV
FAIGFADADYGELVSIASKPSDRHVFFVDDLDAFQRIEEKLVTFVCEAATATCPSIPMSG
STTPGFRMMELFGLVENKYNSIAGVSMVPGTFNAFPCFHLHSNALMAQPTRFIHPEGLPS
DYTITLLFRVLPDTPEEPFAIWEILNKNNDPLTGVILDNGGKTLTFFNNDYRGDFQTVTF
EGPEIKKLFFGSFHKLHIAISKTSAKVFIDCKMVAEKVINAAGNITTDGVEVLGRMVRSR
ENKDNSAPFQLQNFDIICSTSWANRDKCCELPGLRKEVDCPALPKACTCTQDSKGPAGPP
GVPGGPGIRGARGDRGEPGPVGPAGPVGDTGVPGPQGPPGRQGPSGRSIIGPPGPAGERG
QKGEAGQQGQQGIPGRPGPAGREGPPGPRGLIGKDGPQGRQGPPGTMGTPGAPGSPGNTG
PQGKQGTLGPPGPPGTKGEKGERGDLQSTASVQAIARQVCEQLIQSHMSRYNTILNQAPS
PPVSIRTVPGPPGEPGREGAPGPQGEQGPPGRPGFPGQNGQNGNPGERGQPGEKGEKGSA
GVGVQGPRGPPGPPGPQGQGRPGSQGPTGRPGNPGTSGRPGVPGPVGPPGPPGYCDQNSC
LGYNVGVQLPSSVFQNYGEAEEDDPYRYYQPNYPAPQPVSPDDPALALDDVELRSPGVYR
SKRSTKAEEEQAGTKRRIKRGVKNLPKLTN
NT seq
2793 nt
NT seq
+upstream
nt +downstream
nt
atgtctggtgtttgtgctcagtgggtgcctcaccagcatgccagtacctacagactggtt
attcaatctgtgactggtagtcagaagcaggagacgaagctcgatggaggcgccagcaga
cactgtttcagcagcctgaagcccaacatggagtataagatcagcatattctctcagctg
caggacgggactgaaggacctgctgtcactgcaaatgtgaagacattaccaatcccaaca
ccagcaccggccaagcgaccgaccaccacgccgccacccacaatccctcctgctaaggaa
gtttgtaaggcagccaaagcagacctggtctttttagttgatggttcctggagtatcggt
gacgacaacttcctgaagattatccgtttcctgtacagcaccgtcggagctctggatcgg
ataggcccagatggcacacaggtggccatcgcccagttcagtgacgacgctcggactgag
ttcaagctgaactcctacggtaacaaagagcgtctgcttgatgccatcaacaagatctcc
tacaagggaggaaacactaaaacaggtcgagccatccagcatgtgaaggaaaacatcttc
accgctgagggaggagtcaggagaggaatccctaacgtccttgtggttctgactgatggc
cgatcccaggatgatgtcaataaagtttccaaagagatgcagatgtcaggttacattgtg
tttgcgatcggcttcgctgatgccgactatggagagttggtgagcatcgccagtaaaccg
agcgacaggcacgtcttcttcgtggacgacctggacgcctttcagaggatcgaagagaag
ctggtgacctttgtatgcgaggccgctaccgcgacttgtccatctataccaatgagtggc
agcacaaccccaggtttccgtatgatggagctgtttggacttgttgaaaataagtacaac
agcatcgctggtgtttccatggtacctggcaccttcaatgcctttccctgtttccacctg
cacagcaacgctctgatggcacagccaaccaggtttatccatcctgaggggcttccctcc
gactacaccatcaccctgctgttcagagtgctgcctgacacgccggaggagccctttgct
atctgggagatcctcaataagaacaacgatccgcttactggagtcatcctggacaatgga
ggaaaaactctgacattcttcaacaacgactacaggggagattttcagactgtcacattt
gaaggtccagaaatcaaaaaactcttcttcggaagctttcacaagctgcacattgcaatc
agcaagacgagtgccaaagtgttcatcgactgcaaaatggtggcagagaaggtcatcaac
gcagcgggaaacatcaccacagacggagtggaagttctgggcaggatggttcgctcccga
gagaacaaggacaactctgcaccgttccagctccagaactttgacattatttgcagcaca
tcctgggccaacagagacaagtgctgtgagctgcctggtctgaggaaggaggttgactgt
ccggccttacccaaagcctgcacctgcacacaggacagcaaaggtccagctggtcctccc
ggagtgcctggcggtcctggaatcagaggagccagaggtgatcgtggagagccgggtcca
gtgggacccgcaggtcctgttggagatacaggcgtgcccggacctcaaggaccccctgga
cgtcagggaccaagcggccgctccatcattggaccccctggtcctgcaggtgagaggggg
cagaaaggtgaagctggccaacaaggacaacagggtatacctggaagacctggccctgca
ggaagagaaggacctccaggacccaggggacttataggcaaagacggcccacagggcaga
cagggacccccaggaactatggggactccaggagctcctggatctcctggcaataccggc
ccccaaggaaaacagggaaccctgggaccaccgggtccaccaggaacaaagggagagaaa
ggtgaacggggtgacctccagtcaacggcgtcagttcaggccattgccagacaagtctgt
gagcagctgatccaaagtcacatgtcgcgctacaacactatcttgaaccaagcgcccagt
ccaccagtgtccatccgcacagtgcctggacctccaggagaacctggtcgtgaaggtgcc
ccgggaccccagggagaacagggaccaccaggaaggccaggctttcctggccagaatggt
caaaatggaaatcctggagaacgaggtcaaccaggagaaaagggggagaagggatctgca
ggcgttggtgtccagggccccagagggcctccagggcctcctggtccccaaggacagggc
agacctggcagccagggtccaacaggtcgccctggaaaccctggaacttctggtcggccc
ggagttcccggtccagtcggccctccaggaccgccgggatactgtgaccagaactcttgt
ttgggctacaatgttggagtccaacttccgtccagcgttttccaaaactacggggaggca
gaagaggatgacccataccgctactaccagcccaattacccagctcctcaacccgtctcg
cctgatgaccccgcgctggcgctggacgatgtcgagctgaggtcccccggcgtgtaccgc
agcaaacggagcacaaaggcggaagaggagcaagccgggacaaagaggagaataaagaga
ggagtgaagaatcttcctaaactaactaactga
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