Poecilia mexicana (shortfin molly): 106920555
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Entry
106920555 CDS
T08022
Symbol
als2
Name
(RefSeq) alsin isoform X1
KO
K04575
amyotrophic lateral sclerosis 2 protein
Organism
pmei
Poecilia mexicana (shortfin molly)
Brite
KEGG Orthology (KO) [BR:
pmei00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pmei03036
]
106920555 (als2)
Chromosome and associated proteins [BR:
pmei03036
]
Eukaryotic type
Centrosome formation proteins
Other centrosome associated proteins
106920555 (als2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DH_Alsin
WD40_RLD
RCC1
RCC1_2
MORN
VPS9
PH_alsin
Alsin_RLD
PH
HA_Alsin
RhoGEF
Motif
Other DBs
NCBI-GeneID:
106920555
NCBI-ProteinID:
XP_014847120
Ensembl:
ENSPMEG00000020116
LinkDB
All DBs
Position
Unknown
AA seq
1667 aa
AA seq
DB search
MEAQGKSSEDDDGGERGLLHSWRGYSYSVVPERLLLPRPVLQVALGAQHGVLLVEGGQVY
TFGELPWKQTQSSQPTKPTLENALSGQRVVAVAAGSFHSGAVTEDGSVHMWGDNAAGQCG
LSGLSCVPNPTPVALLEPGSAQSVPILELACGEKHSLALSAQREVWAWGSGCQLGLNAAV
FPVWKPQKVEQLAGRWVLQVACGASHSLALVRCVGPDGIQRPPVDKCNQCNQLLYTMTDK
EDHVIISDGHYCPMGVEAREDPPPTQTLKTSPSEPILPSHSSSTSTPAARTPDPTPDPED
SQKAGTTTTAHLPSDSDPLPSPKAAASTSSAKSSPYPGEQEVKEYLRKLSDASQTEAKMA
NGGLHALQTPSLGRGSSALNSLVASCASAVGERVASTYEALSLKRMMNFYLPSSRLEALG
GAADGGAERVRREESVQAKKSSSTGDIHEEEAEGLRRRLSLPGLLSQGRYAVHLLSSSYG
PLLSPRLLRKMGRSRTRAFALTPMGGGVPEDQEVFPTLQTEVWSWGHGEHGELGHGDNLD
RLQPLCIKSLNKKEVIRVSAGAHHSIALTAQSQVYSWGSNLSGQLGHMDTPSTVPRLAKL
SEGIRVWDASAGERHTLLLADGDCIQPIIYYSGQQVKEAGGEEEEVEEEDERPGGYTQQP
VLLPFCMNLGFVSGVVAGGRRCVALSDRNVMGFISSLHELASAERKFYCKLCDVKSQVLR
PLLELESLSSALGPAATELLQTLAGRFSLLSHLTGQHAASLTANLRRGRDVSSLLMLEHA
SIFLDVYNDYCSTVGNFFVMGGFHALTKPSLDVFGKSPELLQRLSECSEENTATSDLLVA
LFYLPTQHLHEYGRLLLKLATCFEVSSGDYQKLQDSWSKFEALTLQLKRKRKEAEYTFHF
WKSFPGKMTDSLRKPHRRLIYESSNKSLTVQNAGRFSVNWFILFNDSLVHAQGVAPCKNL
FSTHHIFALATLWVEPTPEDESGLHGLKVVTPEETLTLLASSSAEKTKWLRAINQAVDQA
LSGVGQDAGGSTSKSDPPISRTASYTFYKDGRLKDATYEGRWLTGKPHGRGILKWPDRRI
YTGSFKSGLEDGFGEFACPNKALSKDDLYQGYWKEGKMHGLGTYRYASGEVYDGSFQDGM
RHGHGMLRSGKHNTSSPSVFIGQWLQDKKTGYGVFDDITKGEKYMGMWQDHQRQGTGVVV
TQFGLYYEGAFKDNKMMGTGILLSEDDTTYEGEFSDDWTLSGKGVLTMPNGDYLEGSFSG
EWGSGLKVTGSYFKPNLFDAEKDKNRAVKLGRLSVRAEEKWQAVFEECWSQLGCEAPGQG
EHLKAWENIAVALTSRRQQIQDSPEILSRSHSKTLEGLEVIPQHEGPITIERYHIVRMYL
LKACDTPLHPLGRLVETLVAVYRMTYVGVGANRRLLPQAVNEIKSYLFRIFQIVRFLFPD
LPEEGGLIPEPTENLPDENQETSADNRSESPKPGRVVSSSALLLPVLLPRLYPPLFTLYA
LEKEKEDDMYWECVLRLNKQPDLALLAFLGVQQKFWPVSIPNSLPAPGEKQPVISSTKDA
CFASAVETLQQISTTFTPSDKLQVIQLTFEEITQEVQSLLKQDFLWSMDELFPVFLYVVL
RARIRNLGSEVSLIEDLMDPCVQHGEHGIMFTTLKACYYQIQHEKVT
NT seq
5004 nt
NT seq
+upstream
nt +downstream
nt
atggaagcccaggggaagagctctgaagatgacgacggaggggagcggggtctcctccac
tcctggaggggctactcctacagcgtggtcccagagaggctgctcctcccgcggccagtg
ctgcaggtcgccctcggagcgcagcacggggttctgctggtggaaggaggacaggtgtat
actttcggggagttgccatggaagcagactcagtcgtcccagcctactaagccgaccctg
gagaacgcgctcagcgggcagcgggtggtcgcggtcgcagccgggagcttccacagcggg
gcggtaacggaggacggcagcgtccacatgtggggggacaacgcggcgggccagtgcggc
ctgtcgggcctcagctgcgtgcccaacccgacgcccgtagccctgctggaacccggcagc
gctcagtcggtccccatcctggagctagcttgcggagagaaacacagccttgcgctgtcg
gcgcagagggaggtgtgggcgtggggcagtgggtgtcagctgggcctgaatgcggccgtc
ttccccgtctggaagcctcagaaggtggagcagctggctgggaggtgggtgctgcaggtg
gcctgcggtgcttcgcacagcctagctctggtgcgctgcgtgggacccgacggtatccag
cgtccccctgtggacaaatgcaaccagtgtaaccagctgctgtacacgatgacggacaaa
gaggaccacgtcataatctctgacggccattactgccccatgggagtggaagccagagag
gacccccctcctacccaaaccttgaaaacatccccatctgaacccatcctgccctcccac
agcagctccacttcaaccccagcagctcgcactcctgaccccacccctgaccccgaggac
tcccagaaggcaggaacaactaccacagcgcacctgccctctgactcggaccccctgcct
tcccctaaagctgctgcttccacctcttccgctaagagctccccgtatcctggcgagcag
gaagtgaaggaatacctgaggaagctgtcggacgcatcgcagactgaagccaagatggcc
aacggcggtctgcacgcgctgcagacgccatcgttgggccgcggctcgtcggccctcaac
agcctggtggcgtcctgcgcctcggcggtgggcgagcgcgttgcctccacctacgaggcc
ctctccctgaagaggatgatgaacttctacttgccgtcgtcgcggctggaggcgctcggc
ggggcggccgacggcggggcggagcgcgtccgccgggaagagtcggtccaggccaagaag
agctccagcacaggggacattcacgaggaggaggcagagggtctgcggcgccgcctctcg
ctgccggggctcctctctcagggtagatacgccgttcacctcttatcctcctcctatggc
ccgctgctgtcgccgcggctgctgaggaagatggggcgctccaggacgcgggccttcgcc
ctcacccccatgggagggggcgttcccgaggaccaggaggtgtttcccaccctgcagacc
gaagtgtggagctggggacacggcgagcacggggagctgggacacggagacaacctggac
aggctgcagccgctctgcatcaagagcctgaacaagaaggaggtgatccgtgtttcagcc
ggcgctcatcactccatcgctctgacggctcagtctcaggtgtattcatggggcagtaac
ctctccggtcagctgggacacatggacacgcccagcaccgtcccccgtcttgcaaaactg
tcggaggggatccgggtttgggacgccagcgctggggagagacacactctgctgctggct
gacggagactgcatccagcccatcatttactacagcgggcagcaggtgaaggaggctgga
ggagaggaagaggaggtggaggaggaagacgagaggccgggaggctacacccagcagccc
gtcctgctcccattctgcatgaacctgggcttcgtgagcggcgtggtcgccggcgggcgc
cggtgcgtcgcgctgtccgacaggaacgtcatgggcttcatctccagtctgcacgagttg
gcgtccgcggagaggaagttctactgcaagctgtgcgacgtcaaatcccaagttctgcgc
cccctgctggagctcgagtctctgagctcagcgttggggccggcggccactgagctcctg
cagacgctggcgggcagattcagcctgctgagccacctgaccgggcagcacgccgccagc
ctcaccgccaacctgcggcgcggccgtgacgtcagcagcctcctcatgctggagcacgcc
agcatcttcctagacgtctacaacgactactgttcaactgtggggaacttctttgtgatg
ggaggtttccacgctcttacaaaaccgtccttggacgtcttcggaaaaagtcccgagttg
ctgcagaggctgtcggagtgcagcgaggagaacaccgccacttccgacctcttggtggcg
ctcttctacctcccaacacaacacttgcacgaatacggccggctgctgctcaaactggcc
acctgcttcgaagtgagctccggtgactaccagaagctgcaggacagctggtccaagttc
gaagctctgactctgcagctgaagaggaaaaggaaagaggccgagtacaccttccacttc
tggaagagcttcccggggaaaatgacggactccctgaggaagccccaccgccgactcatc
tacgagagcagcaacaaatctctcacggtgcagaacgccggccgcttttccgtcaactgg
ttcatcctcttcaacgactcgctggtgcacgcgcagggcgtggcgccttgtaaaaacctt
ttctccacccatcacatcttcgctctggccacgctgtgggtggagccgacaccagaggac
gagtccggactacatggtttgaaggtggtcacgcctgaggagacgctaactctgctggcc
tcgtcttccgccgagaagaccaagtggctccgcgccatcaaccaggctgtggatcaggct
ctgagcggggtggggcaggacgctggcggctcgacgtcaaagtcggaccctccgatctcc
aggacggcttcgtacacattctataaagacggacggctgaaggatgcgacttacgagggt
cgctggctgactggcaagcctcatggcagaggtatcctaaagtggcctgataggaggatt
tatactggctcgttcaaaagcgggttggaggatggctttggggagtttgcttgtcccaat
aaggcgctgagtaaagatgatctttatcaaggttactggaaagaagggaagatgcatggc
cttgggacataccggtacgcaagcggcgaagtttatgatggctccttccaggacggcatg
cggcacggtcacgggatgctgcgcagcggaaagcacaacacctcgtcccccagcgttttc
atcggacaatggctacaagacaagaaaacaggctacggagtctttgacgacatcacaaaa
ggggagaagtacatgggaatgtggcaggaccaccagcggcagggcacgggggtcgtcgtc
acccagtttggtctgtactatgaaggtgccttcaaagacaacaagatgatgggtacagga
atccttctgtctgaggacgacacaacctacgagggggagttctccgatgattggaccctc
agtgggaagggtgtacttactatgccgaatggtgactacctggagggctcctttagtggc
gagtgggggtctggcctcaaagtgacgggctcctacttcaagccaaacttgtttgatgct
gaaaaggacaagaaccgggccgtgaagttgggtcggctgagcgtgagggcggaggaaaag
tggcaggcagtgtttgaggagtgctggagtcagctgggttgcgaggcaccagggcaaggg
gagcacttgaaggcctgggagaatattgctgtggccctgacctccaggaggcagcagata
caagacagtccagaaatattgtctcggagtcacagtaaaactctagagggcctggaggtc
atcccccaacatgaagggcctatcacaattgagagatatcacatcgtccgaatgtaccta
ctcaaggcttgtgacacccccctccatcctctgggccggctggtggaaacccttgtggcc
gtctacaggatgacctacgttggcgtgggcgcgaaccgtcgcctgctgcctcaggcggtc
aacgagatcaagtcttacctcttccgcatcttccagattgtcagatttctcttccctgac
ctgccagaagagggcggtctaatacccgaaccaactgaaaaccttccagatgaaaaccag
gagacgtccgctgacaaccggtcagagtcgcccaaaccaggccgcgtggtgagtagctcg
gctctgctgctgcctgtcctgctgcctcgcctctacccaccgctcttcactctctatgct
ctggagaaggagaaggaggatgacatgtactgggaatgtgtcctgcgcctcaacaagcag
cccgacctcgccctgcttgccttcctgggtgtccaacaaaagttttggcctgtttcaatc
ccaaactctttgcctgctccaggagagaagcagccggttatctcaagcactaaagatgcc
tgctttgcctcggcagtcgaaacgctacagcagatcagcacaacgttcaccccgtcagac
aagctgcaggtgatccagctcaccttcgaggagatcacgcaggaagtgcaatctctgctg
aagcaggacttcctgtggtccatggatgaactgttccccgtgttcctgtatgtggtgctg
cgggcccgaatccgaaatctcggctcagaggtcagcctgattgaagacctgatggatccg
tgcgttcagcacggcgagcacggaatcatgtttaccaccctgaaggcctgctactaccag
atccaacatgagaaggtcacatag
DBGET
integrated database retrieval system