Poecilia mexicana (shortfin molly): 106920652
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Entry
106920652 CDS
T08022
Symbol
prpf39
Name
(RefSeq) pre-mRNA-processing factor 39
KO
K13217
pre-mRNA-processing factor 39
Organism
pmei
Poecilia mexicana (shortfin molly)
Brite
KEGG Orthology (KO) [BR:
pmei00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pmei03041
]
106920652 (prpf39)
Spliceosome [BR:
pmei03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
106920652 (prpf39)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HAT_PRP39_N
HAT_PRP39_C
Suf
HAT_Syf1_CNRKL1_N
TPR_14
HAT_Syf1_CNRKL1_C
TPR_19
TPR_MalT
Ribophorin_II
TPR_10
Motif
Other DBs
NCBI-GeneID:
106920652
NCBI-ProteinID:
XP_014847289
Ensembl:
ENSPMEG00000017034
UniProt:
A0A3B3XHY6
LinkDB
All DBs
Position
Unknown
AA seq
768 aa
AA seq
DB search
MLDTESTAMESNGNEFLPDLPAQAADWSLEQVPPQPAASVAPEGSNSSQGDLTQEQQPSQ
QTNSSELGSVEKAVEQFQLASASLFQEEHPPPPPPPPPPPPAEDPDQPLQFATEPQPEAF
VPDGSQDGTEATQMEDGMELEEPARDGSQEISLPTEPTPPSEFEKLFKICEDSPEDFNAW
VSLLQYVEQENLLLPARKSFDVFFLRYPYCYGYWKKYADMEKKHGNLQVSEEVYRRGLQA
IPLSVDLWLHYLTFIKENSDPNDPETEGRIRASYEHAVLAAGTDFRSDRLWESYISWETE
QQKLANVTTIYDRVLGIPTQLYSQHFQRFKDHVQGNHPKYFLSEEEFVQLRLELSKSSLS
GMVGEDGESNVPQEELPPGTEDLADPAKRVTEIENMRHKVIEVRQEVFNHNEHEVSKRWS
FEEGIKRPYFHVKALERTQLNNWKEYLDFEIENGTPERVVVLFERCLIACALYEEFWIKY
AKYLEGFSTDGARHVYKKACSIHLPKKPAIHLLWAAFEEQQGKVEEARGILKALEETIPN
LAMVRLRRVSLERRRGNLDEAEALLKEGMETANNEMESSFYAVKLARHLVKVQRSLSKAK
KVLLDAIEKDQTSSRLYLNLLELEFSGDVMQNQAEILACFDRALRSPLSLDSRIIFSQRK
VEFLEDFGSDINALVAAYEEQQKLQKESDSLKRTAENGYDSSQEPDAKRQRLDDPSAVAA
NAMTDMQANSSAYNYNWYQQQYGGWGQNSWGQYNQYAQYNQYYPPPPT
NT seq
2307 nt
NT seq
+upstream
nt +downstream
nt
atgctggacactgagtccacagccatggagagtaatgggaacgaatttcttcctgacctt
cctgctcaggcagcggactggtccttggagcaagttcctccacagccggccgccagcgta
gcgccggagggctccaattcttctcagggcgatctgacgcaagagcagcagccgagccaa
caaacgaactcctccgagttgggatccgtggagaaggctgtggagcagtttcagctcgcc
agcgcgtctcttttccaagaagagcatcctcctccgccgccaccgccccctccgccgcca
cctgcagaggatccagaccaaccgctgcaatttgctactgagcctcagccagaggctttt
gtgccagatggaagtcaagatggtacagaagccacacagatggaggatggcatggagctg
gaagaaccagcccgagacggttcacaggaaatttctcttccaacagaaccaaccccaccc
tcagagtttgaaaagctttttaagatctgtgaagacagcccagaggacttcaacgcctgg
gtttcactgctgcagtatgtcgagcaagaaaatcttcttctccctgcaaggaaatcgttt
gacgtctttttcctgcgttatccctactgctatggctactggaagaaatatgcagacatg
gagaaaaaacacggcaacctacaggtttcagaagaggtgtacagaagaggcttgcaggct
attcctcttagtgtggacctttggcttcactacctcacctttatcaaagagaactcggac
cccaacgatccagagacggagggacgaatccgagcttcatacgaacacgcagtgctcgca
gcaggcacagatttccgatctgaccgcctttgggaatcctacataagctgggagacggag
cagcagaagctggctaacgtcaccaccatctacgatcgcgtcttaggcataccgacgcag
ttgtactcccagcactttcagaggttcaaagatcacgtgcagggcaaccaccccaaatac
tttttgtcagaagaggagtttgttcagctcagactcgagctctctaagtccagcctgtct
ggaatggtcggcgaagacggagagtcgaacgttcctcaggaggagctgccaccgggaacc
gaggacctcgccgatcccgccaagagggtgacagaaattgaaaacatgcgccacaaagtg
atcgaggttcggcaggaagtgttcaaccacaacgagcatgaagtcagcaagcgctggtcc
tttgaagaagggattaagcgaccctacttccacgtcaaagcgttggagagaacgcagcta
aacaactggaaggagtacctggacttcgaaatcgagaacgggaccccggagcgggtggtg
gtcctctttgagcgatgcctcatcgcgtgcgccctctacgaggagttctggatcaagtat
gctaagtatctagaaggcttcagcactgacggtgcaagacatgtgtacaagaaggcgtgc
tccatacacctgcccaagaaacctgccatccaccttctgtgggcagcatttgaggagcag
caaggcaaagtggaagaggctcgcgggatcctgaaggccttggaggaaacgatcccgaat
ttggccatggtccgtctccgcagggtcagcctggagcgtcgccgtggcaacttggacgaa
gcagaggccctgttgaaggagggaatggagaccgcaaataacgaaatggagtcgtcgttc
tacgccgtgaagctggcgagacacctggtgaaggtgcagagaagtctgagcaaagcgaag
aaggtccttcttgatgccattgagaaagaccagaccagttcgagactatacctgaacctg
ctggagctggaattcagtggcgatgtgatgcagaaccaggcggagatcttggcttgcttt
gaccgggccctaaggagcccattgtccctggactctcgcatcattttctcccagcgcaaa
gttgaattcttagaagactttggcagtgacatcaacgcgcttgtggctgcgtacgaggaa
caacagaaactacagaaggaaagcgactctttaaagagaacggctgagaacggatatgac
agctctcaagaacctgacgccaaaaggcagagactagacgatccttccgcagttgcagca
aacgcgatgacggacatgcaggcaaacagctctgcatacaactacaactggtaccagcaa
cagtatggcggctggggacaaaattcctggggacagtacaaccagtatgcccagtacaac
caatactaccctcctcctcctacatga
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integrated database retrieval system
