Poecilia mexicana (shortfin molly): 106920869
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Entry
106920869 CDS
T08022
Name
(RefSeq) CCR4-NOT transcription complex subunit 6
KO
K12603
CCR4-NOT transcription complex subunit 6 [EC:
3.1.13.4
]
Organism
pmei
Poecilia mexicana (shortfin molly)
Pathway
pmei03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pmei00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
106920869
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pmei03019
]
106920869
Enzymes [BR:
pmei01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.4 poly(A)-specific ribonuclease
106920869
Messenger RNA biogenesis [BR:
pmei03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
106920869
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
106920869
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
LRR_4
LRR_8
LRR_14
LRR_1
LRR_LRWD1
LRR_R13L1-DRL21
Motif
Other DBs
NCBI-GeneID:
106920869
NCBI-ProteinID:
XP_014847652
Ensembl:
ENSPMEG00000009091
UniProt:
A0A3B3YF84
LinkDB
All DBs
Position
Unknown
AA seq
558 aa
AA seq
DB search
MPKEKYDPPDPRRMYTIMSSEEAANGKKSYWAELEISGRVRSLSTALWSLTHLTALHLSD
NSLSRIPPDIAKLHNLVYLDLSSNKIRSLPAELGNMVSLRELLLNNNQLRVLPFELGKLF
QLQTLGLKGNPLAQEIMSLYQEPDGTRRLLSYLLDNLAGAIKRIPTEQPPARSWISLQEP
DRTRPATLFSVMCYNVLCDKYATRQLYGYCPSWALNWEYRKKSIMQEILGCNADIISLQE
VETEQYFNFFLPELKEQGYDGFFSPKSRARTMSESDRKHVDGCAIFFKTEKFSAVQKHTV
EFNQLAMANSEGSEAMLNRVMTKDNIGVAVLLEVRKEMMEMSSGKSLHGLDKQLLLVANA
HMHWDPEYSDVKLVQTMMFLSEVKNIVDKATRSFKLSTSGETNAIPLVLCADLNSLPDSG
VVEYLSSGGVDCTHKDFKELRYSDSLTKFNCNGKNSTSNGRITHGFKLKSAYENGLMPYT
NYTFDFKGVIDYIFYSKPHLNVLGILGPLDPHWLVENNVSGCPHPHIPSDHFSLYAQLEL
LLPNVPSQVNGLHLPARR
NT seq
1677 nt
NT seq
+upstream
nt +downstream
nt
atgcccaaggaaaaatatgacccgccggatcccaggcggatgtatacaattatgtccagc
gaggaggcagcaaatgggaagaagtcatactgggctgagctggaaattagtggacgagta
aggagtctcagcacagccctgtggtctctcacccacctcactgccctgcacctcagtgac
aactctctgtcacgcatcccgccagacattgccaaactacacaacctggtgtacctggat
ctctcatccaacaagatcaggagcctgccggcagagctcggcaacatggtgtctctcagg
gaattgcttttaaataacaaccagttgcgagttctcccgtttgaattgggaaaacttttt
cagttacagacactggggttaaaaggaaacccacttgcacaagaaattatgagcctctat
caggaacctgatggcacacggagactgctcagctacttgttagacaatctggcaggggct
attaagcgcataccaacagagcagccaccagccaggtcatggatctcgctccaggaacca
gaccgaacacgtccagcaacactgttctcagttatgtgttacaatgtgctgtgcgataag
tatgccacacgacagctatacggctactgcccctcctgggctctgaactgggagtacagg
aagaaatctatcatgcaggaaatcctcggctgcaacgcagacatcatcagtttgcaggaa
gtggaaacggagcagtacttcaatttcttcttaccagagttgaaagagcagggatacgac
gggttcttcagtccaaagtcacgagctagaacgatgtccgagtcggatcgtaaacatgtg
gacggatgtgcaatcttcttcaaaacagaaaaattcagcgctgtgcagaagcacacagtg
gagttcaaccagctggccatggctaactccgaaggctcagaggcgatgctgaacagggtg
atgaccaaggacaacatcggagtagctgtgctgcttgaagtccgcaaagagatgatggaa
atgtcatctggtaagtcactccacggcctggacaagcagctcctgctggtggcaaacgcc
cacatgcactgggatcccgagtactcggatgtcaagctggtccagaccatgatgttcctg
tcggaggtgaagaatatcgtggacaaggcaacacgcagcttcaagctgtccacctctggt
gagaccaatgccattccactggtgctgtgtgccgacctcaactccttacctgactctggt
gtagtcgagtacctgagttcaggcggagtggactgcacccacaaggacttcaaggagctt
cgctacagcgatagcctgaccaaattcaactgcaacggcaagaacagcacttctaatggc
aggatcacccacggcttcaagctcaagagtgcttatgagaacggcctaatgccttacacc
aattacaccttcgactttaagggtgtcatcgactatattttctactccaagcctcatctg
aacgtgttgggcatcttgggccccctggaccctcactggctcgtagagaacaatgtcagc
ggctgcccacacccccacatcccctctgaccacttctccctctatgctcagctggagttg
ctcctgcccaatgtgccctcccaggtcaacgggctgcacctgcccgcacgcaggtag
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