Poecilia mexicana (shortfin molly): 106920917
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Entry
106920917 CDS
T08022
Symbol
thoc5
Name
(RefSeq) THO complex subunit 5 homolog
KO
K13174
THO complex subunit 5
Organism
pmei
Poecilia mexicana (shortfin molly)
Pathway
pmei03013
Nucleocytoplasmic transport
pmei03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pmei00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
106920917 (thoc5)
09122 Translation
03013 Nucleocytoplasmic transport
106920917 (thoc5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pmei03019
]
106920917 (thoc5)
03041 Spliceosome [BR:
pmei03041
]
106920917 (thoc5)
Messenger RNA biogenesis [BR:
pmei03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
106920917 (thoc5)
Spliceosome [BR:
pmei03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
106920917 (thoc5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FmiP_Thoc5
Motif
Other DBs
NCBI-GeneID:
106920917
NCBI-ProteinID:
XP_014847740
Ensembl:
ENSPMEG00000008199
UniProt:
A0A3B3WVE9
LinkDB
All DBs
Position
Unknown
AA seq
685 aa
AA seq
DB search
MAMSTDALKKRKSKVLRGEGGTPETKRGRGEVDQDLRVYNEEGELDGRDPEQDYLQYKES
CESLAAVMSEIQELKANGAKEGSAEVELRRMQGCIHFMNLKKLNRLAHMRLKRGRDQTHE
AKQKVDVLHLQLQNLLYEVMHLQKEISKCLEFKSKHEEIDLVSEEEFFQDAPLEISRPSL
TKNDPHQLTLARLDWELEQRKRLAEKYEESQSTKEKIQKTIEVKKEHLRSLQPGLNAIMQ
ASLPVQDYLSMPFEKTQKQAEIARHLPPPLYVLFVQANAYGQACDKNLSVSICGDVDEAR
ALSKPPDDSQDDESDSDAEEEQEKTKRRRPTTGGQLDDKRREMLKRHPLSLSLDLQCKDG
STLHLYFFYLMNLNILTVKTRVSTSTDLNAAISAGELLKSETLLSCLYTSDQGRETPNPA
NRYQFDKVGIVSFADYVEELGYPYMWVQNLGGLHFPTESSEGFLVGSSLSASHMETTMKL
LRGRVLSRLALHKQFASLEHNIIPISAECQHLFPAKIISRLARWTTISQQEYLELPYTHH
VAEAGLARETDLYFMGVIERGTACLHAAVVLSPRYPEISPLFSLSLNWKGECSGRSDDNL
RAVESEVNVFKNELQGPKPGHQLLTNQIARLCVCLDVYLETEVQDDSVEGPREFPREKMC
LRTVRGPNRLKPFKYNHPQGFFSHR
NT seq
2058 nt
NT seq
+upstream
nt +downstream
nt
atggccatgtcgaccgatgccttaaagaagagaaagtcgaaggttctccgcggtgaagga
gggaccccagagacgaagcgaggccggggggaagtggaccaggatcttcgtgtctataat
gaggagggggagctggacggcagggaccccgagcaggactacctgcagtacaaagagtcc
tgtgagagtttggctgcagtcatgagtgagatccaggagctgaaagccaacggcgccaaa
gaggggagtgccgaggtggagctgagacgcatgcaaggctgcatccacttcatgaacctg
aaaaaactcaaccgtttggctcacatgcgtctaaaaagaggccgagaccaaacccacgag
gcaaagcaaaaggtcgacgtgcttcatcttcagctgcagaacctcctctacgaggtcatg
catcttcagaaggagatcagcaagtgtctcgaattcaaatccaagcatgaagaaattgac
ctggtgagcgaagaggagttcttccaggacgcgccgctggagatttccaggcccagcctg
accaaaaatgacccccaccagctgacactggcaagactggactgggagctggaacagagg
aagaggttggcggagaaatacgaggagtcacagtcgacaaaggagaaaattcagaagacc
atagaggtgaagaaggagcatctgagaagccttcagcctggactgaatgccatcatgcag
gcgtctctcccggtgcaggactacctgtccatgccgttcgaaaagacccagaagcaggca
gagattgcccgtcaccttcctcctccgctctacgtgctgtttgttcaagcaaatgcttac
ggccaagcctgtgacaagaacctgagtgtgtcgatctgcggtgacgtggacgaggccagg
gccctttccaagcctcctgatgattctcaagatgatgagagtgattcagatgcagaagag
gagcaggagaaaacgaagagaagaaggccgacaacaggcggacagctggacgacaaaaga
cgagagatgctaaaaagacaccctctgtctctcagcttggaccttcagtgtaaagatggc
agcactctgcatctctacttcttctacctgatgaatctgaatattctgactgtgaagacg
agagtctctacctccaccgacctcaacgcagccatcagcgctggagagcttcttaaatcg
gaaactctcctgagctgtctctacaccagtgaccaaggaagagaaactcccaatccagcc
aatcgctaccagtttgacaaagtcgggattgtttcctttgctgactatgtggaggagctg
ggatatccctacatgtgggtccagaatctgggaggacttcatttccccactgaatcttca
gagggctttctggtgggcagttctctgagcgccagccacatggagaccaccatgaagctg
ctgaggggccgagtcctgtcccgcttggctctgcacaaacagtttgcttctttagagcac
aacatcattccgatctccgccgagtgtcagcacctgtttcctgccaagatcatctcccgt
ctggctcggtggaccaccatcagtcagcaggagtacttggaactgccctatacccatcat
gtagctgaagctggactggccagggagacggacctgtactttatgggagtcatcgaaagg
ggaacagcatgtcttcacgccgctgtggtcctgagtccccgctacccagagatctctcct
ctgttctccctgtccctcaactggaagggagagtgcagcgggcgcagtgacgacaacctg
agagctgtggagagtgaagtgaatgtgttcaaaaacgagcttcagggcccaaagcctggc
catcagctgctgaccaatcagattgcacgcctgtgcgtctgcttggacgtgtatttggag
acagaagtgcaagatgacagtgtggaggggcctcgggaattcccacgagaaaagatgtgt
ctgcgtactgtcaggggtccaaaccgcctgaagccgttcaagtacaaccaccctcagggc
ttcttcagtcaccgttag
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integrated database retrieval system
