Poecilia mexicana (shortfin molly): 106921019
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Entry
106921019 CDS
T08022
Name
(RefSeq) SWI/SNF complex subunit SMARCC1-like
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
pmei
Poecilia mexicana (shortfin molly)
Pathway
pmei03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
pmei00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
106921019
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pmei03021
]
106921019
03036 Chromosome and associated proteins [BR:
pmei03036
]
106921019
Transcription machinery [BR:
pmei03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
106921019
Chromosome and associated proteins [BR:
pmei03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
106921019
PBAF complex
106921019
GBAF(ncBAF) complex
106921019
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SWIRM-assoc_2
SWIRM-assoc_1
SWIRM
Myb_DNA-binding
Myb_DNA-bind_6
SWIRM-assoc_3
SpeFL
Exonuc_VII_L
Motif
Other DBs
NCBI-GeneID:
106921019
NCBI-ProteinID:
XP_014847916
Ensembl:
ENSPMEG00000002084
UniProt:
A0A3B3Y3L6
LinkDB
All DBs
Position
Unknown
AA seq
937 aa
AA seq
DB search
MSGGTNLGFPGINQALAHRKKDSSPSARFWESPDTLTQLEVVRQWIGKHYKKYVLVDAPS
CQVLAAVTLQLLQFQEDAFGRQAPNPALTKLPAHCFLDLQPGGGLCHILGTAYKFKVEQG
WRRFDLQNPSRTERNVEMFGVIEKALIQNNCVSIPVVFIDPTVDLELSSRLTGIIIKHKG
AITEDSIMATHHVYGPLASTEEDEWMRPVMRKDKHVLVHWGMHPDSYDSWLSSSDVEGDV
EDVPHVERPWRVHAGWVLDTDVFNEWMNEEDYCVNERNLPLILRQRIHLQEDQDSKSTPF
KKRRRSPSPSTDGRKKGKKGRRRGQQEEEPEEDLTKDMEDPTPVPNMEVVTLPKNVNLKK
DSENTPVKGGIMADLDDQEDDFPGREEDEGRSEIPRLSEGEDNITEQTHHIIIPSYTSWF
NYNSIHSIEKRALPEFFNGKNKSKTPEIFLAYRNFMIDTYRLNPQDYLSSTSCRRNLTGD
VCALIRVHAFLEQWGLINYQVDAESRPLPMGPPPTPHFNVLADTPSGLAPLQHKPLQVSA
SQHMLNFPEKSREKPSDYQNFGLRTDIYARKHPKTKGANAGREWTEQETLLLLEALEVYR
DDWNKVSEHVGSRTQDECILHFLRLPIEDPYLEDSSASLGPLAYQPVPFSQSENPVMSTV
AFLASVVDPRVASAAAKAALEEFSRAQEDSLYKTSDPSNQSEQTDAMEAERLDSSSLQVP
VRLDGVKMEPGVPKVDGDQVKREHSESILTEEGDVRGEDGENRGEGDDGRRGMELDLVEG
SVPTAAAAALSSAASKAKHLAAVEERKIKSLVALLVETQMKKLEIKLRHFEELETIMDRE
KEALEQQRQQLLTERQTFHTEQLQQAEMKVRQQREQQSQPGYTMQHSGQSAANRMVPGGN
GQTMAPRHPGAPNGMYPSSQPDGIASAQPTPPSSSHS
NT seq
2814 nt
NT seq
+upstream
nt +downstream
nt
atgtccggaggaacaaacctcggctttccggggataaaccaagcgttggcgcatcgcaaa
aaagacagtagtccctctgctcggttctgggagagtccggacactttaacccagctggag
gtggtgcgacagtggatcgggaagcactacaaaaagtatgtgctggtggacgctccatct
tgtcaggtcctggctgcagtcaccttgcagcttctccagttccaggaggatgcctttggc
agacaagctcccaaccctgctcttacaaagcttccagcacattgtttcctggacttgcaa
ccaggcggcggactctgtcacatcctaggcaccgcttacaaattcaaggttgaacagggc
tggagaaggtttgacctgcagaatccgtcaagaactgagagaaacgttgagatgtttggc
gtgattgaaaaagctttaatccagaacaactgtgtctccatccctgtggtatttattgac
cctactgttgacctggagctgtccagcagactcactggcatcatcatcaaacacaagggt
gcaattaccgaggacagtataatggccactcatcacgtatacggcccacttgcttccaca
gaggaggatgagtggatgcgtcctgttatgcgaaaggacaaacacgttttggtccactgg
ggcatgcaccctgacagttatgacagctggctgtcctcaagtgacgtggaaggagacgtc
gaagacgtgccgcacgtagagaggccgtggagggttcatgcaggttgggttctggacaca
gacgtgtttaatgagtggatgaacgaggaggactattgtgtaaatgagaggaacctgccg
ctcatccttcgacagcgaatccacctacaagaagatcaggactccaagtccactccgttc
aaaaagagaagacgctcaccctctccttccactgatggcagaaaaaaagggaagaaaggg
agaaggcgcggccaacaggaagaggagccagaagaagacctgaccaaagacatggaggac
ccaacgcctgtgccaaacatggaagtagtcactctacccaagaatgtgaacctaaagaaa
gacagtgagaatacgccagtgaagggaggcatcatggctgacctcgatgatcaggaagat
gactttcctggaagggaagaagatgagggaagaagtgagatcccccgcttatcagaggga
gaggacaatatcactgaacaaactcatcatatcataataccaagctacacatcgtggttc
aattacaacagcattcactcgatagagaaacgtgctcttcctgaattcttcaacggaaag
aacaaatcaaaaactcctgaaatcttcttggcgtatcgtaacttcatgatcgacacgtac
cggctcaacccccaggactacctcagctcaacgtcctgcaggcgcaacctcactggagac
gtctgtgcccttataagggttcatgcttttttagaacagtggggtttgatcaactaccaa
gtggatgcagagagccgacccctccccatgggacctcctccaacccctcatttcaacgtc
ctggccgacacgccgtccgggctggcacccctgcagcacaaaccccttcaggtgtccgcc
tcacagcacatgttgaatttcccagagaagagcagagagaaaccttcagactaccagaac
tttggtctgcgcaccgacatctacgccaggaaacacccaaagactaaaggagcaaacgca
ggacgagaatggacagagcaggagacactgttactgttggaggccttagaagtgtacagg
gacgactggaacaaagtatcggagcacgtgggctccagaacgcaggacgaatgcatccta
cactttctacgtttgcccatcgaggacccctacctggaggactcgtcggcctctctgggg
ccgctggcgtatcagcccgtgccttttagccagtcggaaaaccccgtcatgagcaccgtg
gccttcctggcgtctgtggtagatccacgtgtggcgtcggccgcagcgaaggcggcgctc
gaggagttctccagagcacaggaagactcgctgtataaaacctctgatccatccaaccag
tcagaacaaacggatgcaatggaagcggaaagacttgattccagctcccttcaggttcct
gtgaggctggacggagtcaagatggagcctggcgtgccgaaagtggacggagatcaagtt
aaaagagaacatagtgaaagtattctgacggaggagggcgatgtcaggggggaggatggt
gagaacaggggagaaggggacgatgggaggagagggatggagctggacctggtggaggga
agcgttcccacggcggcggcagcagctctgtcatctgctgcctcaaaggccaagcactta
gcagcagtagaagagaggaagatcaagtctctggtggctctcctggtggagacgcagatg
aagaagctggagatcaaactgagacactttgaagagctggaaaccatcatggacagagag
aaggaggctctggagcagcagcgccaacagctgctgacagagaggcagactttccatact
gagcagctgcaacaggcagagatgaaggttcgccagcagagggagcagcagagccagccg
ggttacacaatgcaacattcaggccagtctgcggccaacaggatggtacctggaggaaac
ggtcagacgatggcccctcgacaccccggagctccaaatgggatgtacccgtcgtcacag
cctgatgggatagcatccgctcagcccactcctccgtcatccagtcacagctga
DBGET
integrated database retrieval system
