Poecilia mexicana (shortfin molly): 106921159
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Entry
106921159 CDS
T08022
Symbol
col28a1
Name
(RefSeq) collagen alpha-1(XXVIII) chain
KO
K23619
collagen type XXVIII alpha
Organism
pmei
Poecilia mexicana (shortfin molly)
Brite
KEGG Orthology (KO) [BR:
pmei00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pmei01002
]
106921159 (col28a1)
Peptidases and inhibitors [BR:
pmei01002
]
Peptidase inhibitors
Family I2: Kunitz - BPTI family
106921159 (col28a1)
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Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
VWA
VWA_2
Kunitz_BPTI
VWA_3
Motif
Other DBs
NCBI-GeneID:
106921159
NCBI-ProteinID:
XP_014848136
LinkDB
All DBs
Position
Unknown
AA seq
1163 aa
AA seq
DB search
MNVLELVKIFALILMLSCPIKCQNRRKDHRDSKVITYKAKPLVCPVEIMFIVDSTENAQP
VLFEQQKTFILRFSTKLMQLQPAGWRLRLRLAALQYSSKVSVEHNFRDWQDMDVFQSRVA
SMTFIGHGSYSAYAITNATKVFRQETSPSGLKVALLMTDGRDHPRSPSAITAAAEAKQHN
IRVFTIRLSAQPNPDTMGTQLRSIASAPQQQHVLSLSDSQLDEKLFSEINTVVTTGCPQP
KNCRCEKGERGRPGSLGKPGKTGLDGAPGPKGSQGEPGTNGRPGISGLEGRPGRKGEKGE
QGEFGAFGAKGGKGLAGPAGLAGRKGEEGDRGPPGDPGPEGPSGPKGNAGTRGTPGPPGE
NGVGFPGPKGDKGSQGRPGPLGPTGSGEPGSQGPMGPTGIQGSGGFPGDGLVGPKGDRGS
EGPKGSMGPPGHGHKGDKGSTGAPGVPGLTGAPGAGVQGEKGEQGPIGPPGPRGPPGLAT
PGSKGDQGFPGQPGHQGERGTGEPGAKGQTGTDGAPGIPGIPGEDGTVGRKGEMGLPGPQ
GPEGAPGTGTSGEKGNRGDRGSRGLSGSPGPIGPAGAKGEPGSSGMMGLPGPPGRSYPGT
KGEPGPVGPSGPVGEPGVGIIGPKGNKGSVGPVGPLGPKEDSVPGPEGLPGLTGLRGEMG
PEGKGLPGATGERGLPGVPGPSGPPGTGLPGPKGSTGQPGPPGMHGPPGEGLPGPKGEHG
FQGPMGQRGLPGADLSGQKGSQGSPGQKGKKGDMGDLGPPGSPGNPGRPGEKGEPGLARD
EVIQIIKEIFGCGVMCREIPLELVFVIDSSESVGPENFEVVKDFVNAIIDQFTVSQEASR
VGVVLYSHLNTVVVGLQQQSSREEIKAAVRAMPYLGEGTFTGSAMLQARKLFRDSRPHVR
KVAVVLTNVLLDQRDLVQFKETASENHAEGIEVLIIGVVKKTDPLYEEFLSEMKTVASDP
KEEHVYIIDDFLLLPVLENNILKQICDRDAAAPFSPKSLFSSVETHPNGPDDIESKKIPE
AKNTRPPAPQPTESLWPHEDQFDPEVTVEPSNKQPSLPFTPHGEKGESGQNSVVQRQSPT
DWPGEVESFHTTFGPPSPTLTVSPPSGGGCNQPLEPGPCRQYRTRWYYDPEANACAQFWY
GGCQGNANNFENEANCRNTCVYT
NT seq
3492 nt
NT seq
+upstream
nt +downstream
nt
atgaatgtgctggagcttgtgaagatttttgcgctaattttgatgctgtcatgtccaatc
aaatgccaaaacaggaggaaagaccatagagacagcaaggtcatcacatacaaggccaaa
cccttggtctgcccagtggaaatcatgttcatagtggacagtacagagaatgcccaacct
gtgctgtttgagcagcagaagacgttcatcctgcgcttcagcaccaagctcatgcagctt
cagcctgcaggctggcgtctgcgcctgcgcctcgctgccctgcagtacagcagcaaagta
tcagtagagcataacttcagagactggcaggacatggacgtcttccagagtcgggtggcc
tcaatgactttcattggccatgggtcatactctgcctatgccatcaccaatgccaccaag
gtattcaggcaggagacatcccccagtggtctcaaggtggcgctgctcatgacggacgga
agagaccaccctcgcagccccagtgccatcacagcggctgcagaggccaaacagcacaac
atcagggtgttcaccatcaggctgtctgcacagcccaacccagataccatgggaacacag
ctacgatccattgccagtgccccccaacagcagcatgtgctcagtctctctgacagccag
cttgatgaaaaactcttcagtgaaataaacacagttgttacaacagggtgcccacagcca
aagaactgtaggtgtgagaagggggagaggggtcgccctggcagtctggggaaaccaggt
aagacaggtttggatggtgctccaggtccaaaggggtctcagggtgaacctggtactaat
gggcgcccaggaatctccggccttgaggggagacctggcaggaaaggtgaaaagggggaa
caaggcgaatttggagcgtttggtgcaaaaggaggaaaaggtctggctggacctgctgga
ttagcaggccgtaaaggagaggagggagacagagggccaccaggagacccggggccagag
ggaccatcaggacctaaaggcaatgcaggaacaagggggacacctggacctccaggagaa
aatggtgttggcttcccgggtcccaagggtgacaagggaagccaaggaagaccaggtcca
cttggtccgacgggttctggtgagccgggaagtcagggtccgatggggcctacaggaata
caagggtctggtggtttccctggtgatggtctagtaggaccaaagggtgacagagggtct
gaaggccccaaaggcagcatgggaccccctggacatgggcacaaaggtgataagggaagc
acaggcgcacctggggttccgggtttgaccggagcaccgggtgcaggggtccaaggagaa
aagggagaacaaggacccattggcccccctggtcctagaggacctccagggctggcaaca
cctgggtcaaagggtgaccaaggatttcccggacagccaggtcatcaaggagaaagaggc
acaggtgaaccaggggccaagggtcagacgggaactgatggggcccctgggatacctggc
attcctggtgaagatggaaccgtagggcgtaagggagagatgggtttgccaggaccccaa
ggcccagagggagcaccaggaacaggcacatctggagaaaagggtaatagaggtgaccga
ggttccaggggactgtcaggctctccgggccccattggacctgctggagctaagggagag
ccaggcagctcaggaatgatgggcctacctggacctcctggacggagctacccaggaaca
aagggagagccaggccccgtgggaccatctggacctgttggagagcctggagtgggaata
attggacccaaaggaaacaaaggtagtgttggacctgttgggccactggggccaaaggaa
gactctgttcctggacctgagggtttgccaggtttgactggactaagaggagaaatggga
cctgaaggaaaaggattaccgggagcaacgggtgaaagaggcttaccgggtgtaccagga
ccatcaggacctcctggaactggacttcctgggccaaagggttctacaggacagcctggc
ccacctggcatgcatgggcctccaggagaaggactacctggaccaaagggcgagcatgga
tttcaaggtccaatgggacaaagagggcttccaggagcagatctctcaggacagaagggt
agtcaaggatctcctggacaaaaggggaaaaagggagatatgggggaccttggaccacct
ggctctcctggaaatccggggagacctggagaaaaaggagagccgggacttgcgagagat
gaagtcatccagatcataaaggaaatatttggatgtggcgtcatgtgcagagagattcca
ctggaactggtatttgtgattgacagctctgagagcgtgggcccggaaaactttgaggta
gttaaggactttgtgaacgcgattattgaccagttcactgtgagccaggaggccagccgc
gttggggtggtcctctacagccatctgaacacggtggtggtcggcctgcaacagcagtcc
agcagggaggagatcaaggctgctgtcagagccatgccctacctgggcgagggtaccttc
accggcagcgccatgctccaagccaggaagctgttcagagactctcgaccccatgtgagg
aaagtggctgtagttttaacgaatgttctgttagatcagcgtgatctggtgcagtttaaa
gagacagcctcagaaaaccatgcagaggggattgaggtgttgatcataggtgtggtgaaa
aagactgatcctctttatgaagagttcctgagtgagatgaagactgttgcctctgatcct
aaagaagaacatgtctacattatcgatgacttcctattgctgcctgttctggagaataat
attctgaagcagatttgtgatcgagatgcagcggcaccatttagtccaaaatcgttgttt
tcatctgtggaaacccatccgaatggaccggatgacatcgagtctaaaaagatcccagaa
gcaaaaaacacaaggccacctgctccacagcccactgagtcactgtggcctcatgaggac
cagtttgaccctgaggtgacggtggagccctccaacaagcagccaagtctaccatttacc
cctcatggtgagaagggagagtcagggcagaactctgtggtgcagcggcagagtccgact
gactggccaggtgaggtggagagctttcatacaacctttggccctccatcaccaactctg
actgtgtcacctccatcaggtggggggtgcaaccagcctcttgaacctggtccgtgtcgg
cagtacaggactaggtggtactacgacccggaggccaacgcctgtgcacagttctggtat
ggcggttgtcagggcaacgcaaacaactttgagaatgaagccaactgcaggaatacctgc
gtctacacgtaa
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