Poecilia mexicana (shortfin molly): 106921277 Help Entry 106921277         CDS       T08022                                  Symbol thbs4 Name (RefSeq) thrombospondin-4 isoform X1   KO K04659   thrombospondin 2/3/4/5 Organism pmei  Poecilia mexicana (shortfin molly) Pathway pmei04145   Phagosome pmei04510   Focal adhesion pmei04512   ECM-receptor interaction pmei04820   Cytoskeleton in muscle cells Brite KEGG Orthology (KO) [BR:pmei00001]  09130 Environmental Information Processing   09133 Signaling molecules and interaction    04512 ECM-receptor interaction     106921277 (thbs4)  09140 Cellular Processes   09141 Transport and catabolism    04145 Phagosome     106921277 (thbs4)   09144 Cellular community - eukaryotes    04510 Focal adhesion     106921277 (thbs4)   09142 Cell motility    04820 Cytoskeleton in muscle cells     106921277 (thbs4)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04131 Membrane trafficking [BR:pmei04131]     106921277 (thbs4)   09183 Protein families: signaling and cellular processes    04147 Exosome [BR:pmei04147]     106921277 (thbs4)    00536 Glycosaminoglycan binding proteins [BR:pmei00536]     106921277 (thbs4) Membrane trafficking [BR:pmei04131]  Endocytosis   Phagocytosis    Opsonins     106921277 (thbs4) Exosome [BR:pmei04147]  Exosomal proteins   Exosomal proteins of other body fluids (saliva and urine)    106921277 (thbs4)   Exosomal proteins of colorectal cancer cells    106921277 (thbs4)   Exosomal proteins of bladder cancer cells    106921277 (thbs4) Glycosaminoglycan binding proteins [BR:pmei00536]  Heparan sulfate / Heparin   Extracellular matrix molecules    106921277 (thbs4) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  TSP_C TSP_3 EGF_CA COMP EGF_3 cEGF EGF Laminin_G_2 EGF_MSP1_1 Motif Other DBs NCBI-GeneID:  106921277 NCBI-ProteinID:  XP_014848341 Ensembl:  ENSPMEG00000020316 LinkDB All DBs Position Unknown AA seq 976 aa AA seqDB search MCFKAAAALWLVLQQLLLTVSAEGIVYDLLVSPDCLPDLLQGSLKNKGRDEAFLLSSFRL QNRAPTSLFSVLNPKDNTKYLELNVQAKLSKMTLRYQKTDGRFGTTSFNHGSLADGREHH VMMHASGLQRGPPRLNIYVDCRLAHTVNDLPAAFGSLPPGPNKVALRTLQSSGQDNLTDL KLVIEDTIDNVATLQDCSMEPAESLHLLGFQGGRVVQDQTSIQELKSMLSEMRELLHKQI KETNFLRNTIAECLACGLGGSPTNPVPGPSPEQVVIPSHLTGCPTGTCFRQNMCIPSESG GFQCAPCPDGYTGDGVHCDDVDECSFNPCFPGVRCVNTAPGFRCEKCPVGYMGPEINGVG VSYAKSHKQVCEDLDECLGPPENGGCTPNSLCYNTIGSFRCGECRAGFTGDQLTGCHGTR LCPNGQPNPCDVNGECIVERDGSISCVCGIGWAGNGYECGKDTDIDAYPDNNLVCRDNNC NQVLHSYVLLPFSCSAQAYVRNYCVCVFQDNCVFVPNSGQEDADRDGSGDACDDDADNDG IINVDDNCWLVPNVDQKNSDKDIHGDACDNCKTIQNPSQRDTDKDGLGDECDDDMDGDGL KNVLDNCQRVPNPDQADRDNDGVGDACDSCPDVANPNQSDSDDDLVGDTCDDNIDSDGDG HQNTKDNCPTVINSSQLDTDKDGMGDECDDDDDNDGIPDSEDNCRLVPNSDQKDSDMDKV GDACEGDFDKDNVIDIIDHCPENAEVTLTDFRAYQTVVLDPEGDSQIDPNWVVLNQGMEI VQTMNSDPGLAVGYKAFSGVDFEGTFHVNTVTDDDYAGFIFGYQDSSSFYVVMWKQTEQT YWQAAPFRAVAEPGIQLKVVKSKTGPGEYMRNSLWHTGNTTDQVRLLWKDPRNVGWKDKV SYRWFLQHRPQVGYIRARFYEGSKLVADTGVIIDTSMRGGRLGVFCFSQENIIWSNLKYR CNDNIPDDYQEVEGAE NT seq 2931 nt NT seq  +upstreamnt  +downstreamnt atgtgtttcaaagcagcagcagctctatggctggtgctgcagcaactgctgctcactgtc tcagctgagggtattgtctacgacctgctggtgtctccagactgcctgccagacttgctc caaggaagcctgaagaacaaaggcagggatgaggcgttcctcctctcgtccttcaggctc caaaacagggcccccacctctctgttcagcgtgctcaaccccaaagacaacaccaagtac ctggagctgaatgtgcaagccaaactgagcaaaatgacgcttcgttaccagaagaccgac ggcaggtttggcaccaccagtttcaaccacggctccctggcagacggacgggagcaccac gtcatgatgcacgccagcggcctccagcgcggcccgcctcgccttaacatctacgtcgac tgcaggctcgctcatactgtgaatgacctgccggccgcgttcgggtcactcccacctggg cccaacaaggtggcactgaggaccctgcagtcaagcggacaggataacctgacagacttg aagctggtcattgaggacaccatcgacaacgtggccaccctgcaggactgcagcatggaa ccagcggagtctctgcacctgctgggtttccagggaggcagggtggtgcaagatcagacc agcatacaggagctgaagagcatgctgtctgagatgagggagctgctccacaagcagatt aaggaaacaaactttctgaggaacaccattgctgagtgtctggcttgtggactcgggggc agtcccaccaaccctgtcccaggtccgagtcctgagcaggtggtcattccttcccatctg actgggtgcccgacagggacctgtttcagacagaacatgtgcattccctcagagtcaggg ggcttccagtgcgccccctgtcctgatggatacacaggagacggggttcactgtgacgac gtagatgagtgcagctttaatccgtgtttccctggcgtccgctgtgtgaacaccgctcct ggttttcgctgcgagaaatgccccgtgggatacatgggaccagagatcaatggcgtcgga gtgtcttacgccaaatcacacaaacaggtgtgtgaagacttagacgagtgtctgggcccg cctgagaacggaggctgcacccccaactccctctgctacaacactattggctccttccga tgtggagagtgtagggctggtttcactggtgaccagttgacaggctgtcatggcaccaga ctgtgccccaatggtcagccgaacccttgcgacgtcaatggggagtgcattgtggagaga gatggaagcattagttgtgtgtgcggtattggttgggctggtaatggctacgaatgtggg aaggacacagatattgatgcgtatccagacaataatcttgtgtgcagagacaacaactgt aaccaggtactccattcctacgtcctcctcccattctcatgttcagcccaggcttacgtc agaaactattgtgtgtgtgttttccaggacaactgtgtgtttgtgcccaactctggccaa gaggatgcggacagggacgggtctggtgacgcctgtgacgacgatgcagacaatgacggc atcattaacgtagacgataactgctggttggtcccaaatgtggaccagaagaatagtgat aaagacatccacggcgacgcctgcgataactgcaaaacaatccaaaatccctcacagagg gacacggacaaggacggactgggagacgaatgtgacgacgacatggacggagacggcttg aaaaacgttcttgacaactgccagcgagtcccgaacccagatcaggcagacagggacaac gacggcgtaggggacgcgtgtgacagctgtcctgacgtggccaaccctaatcagtcggac tcagacgacgacctagtaggagatacctgtgatgacaacatagacagtgacggtgacggt caccagaacacgaaagacaattgtcccactgtcatcaactcgtctcagctggacacggac aaagatggaatgggagatgaatgtgacgacgatgacgacaatgatggcataccagatagt gaagataactgcagactggttcccaactcagaccaaaaggactcagacatggacaaagtt ggagacgcgtgcgagggagattttgacaaggacaacgtgattgacatcatcgaccactgc cctgagaacgctgaggtcacgctgaccgacttcagagcgtaccagaccgtggtgctggac cctgagggagactcacagatagatcccaactgggtggtgctcaaccagggtatggagata gtccagaccatgaactctgatcctggccttgctgttggctataaagccttcagtggagtt gacttcgagggaaccttccacgtgaacacagtgacggacgatgattatgctggcttcatt ttcggctaccaggactcgtcctccttctacgtggtgatgtggaaacagacggagcagacc tactggcaggccgcgcccttcagagctgtcgctgagcctggaatacaattgaaggtggtg aagtctaagacgggtcctggtgagtacatgaggaactccctgtggcacacaggaaacaca acggaccaggtgcgtctcctgtggaaggaccccaggaatgtcggctggaaggacaaggtt tcctaccgctggttcctccagcacagaccgcaggtcggatacatcagagctcgtttctac gaggggtccaaactggtggcggacactggggtgatcattgacaccagtatgaggggtggg cgactgggtgtgttctgtttctctcaggaaaacattatctggtccaacctgaagtaccgc tgtaacgacaacattcctgacgactatcaagaggtggaaggggcagagtga

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