Poecilia mexicana (shortfin molly): 106921431
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Entry
106921431 CDS
T08022
Symbol
blm
Name
(RefSeq) Bloom syndrome protein isoform X1
KO
K10901
bloom syndrome protein [EC:
5.6.2.4
]
Organism
pmei
Poecilia mexicana (shortfin molly)
Pathway
pmei03440
Homologous recombination
pmei03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
pmei00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
106921431 (blm)
03460 Fanconi anemia pathway
106921431 (blm)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pmei03032
]
106921431 (blm)
03400 DNA repair and recombination proteins [BR:
pmei03400
]
106921431 (blm)
Enzymes [BR:
pmei01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
106921431 (blm)
DNA replication proteins [BR:
pmei03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
106921431 (blm)
DNA repair and recombination proteins [BR:
pmei03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecQ family DNA helicases
106921431 (blm)
Bloom's syndrome complex (BTR)
106921431 (blm)
FA (Fanconi anemia) pathway
106921431 (blm)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
BLM_N
BDHCT
Helicase_C
RecQ_Zn_bind
HRDC
RQC
Motif
Other DBs
NCBI-GeneID:
106921431
NCBI-ProteinID:
XP_014848621
Ensembl:
ENSPMEG00000000321
UniProt:
A0A3B3YPJ4
LinkDB
All DBs
Position
Unknown
AA seq
1396 aa
AA seq
DB search
MSSLPQNNLKEQLARHNNATHNKLSLAKPKTGAFSFKKKSSLGTTKVEYPTKVNSPNILA
NRNVNVLGNSLVTKSSLTFSNKLERTQKSKINNFFSPSTNSKSNFSLAGNSTSTCEEPPA
DTGGKVIAAPAKPNNQSSCGGKGIGSAGLDLSDLPVDDWDDFEDFETPAKTKNDSLCSEK
SARVTETVSSSDEEFPEFTGKQSHDSGHLKSELSEKNREQSCMEKEEPESRIGKTTVSLE
PSLVDGLPDDEVEDTPVKRTRRRCPPPHVTSVLSDSDEEISTMSEPSKDKTDEKGKWIDP
KVINLNDNSEPEEDVDYIPPSPPPDETFYRPSSAETRRTHSDIVQSRDKLFQSNSPATTL
LEPSNHLSSDKTKDQLFSIMESICTLVDSIPEHELIALTCGNELLLKRAHRKRILACGVD
SLRMPQPDSTVISDTSYKETFSSYSASSLTSPSSSLFLDTKKPLNSQRSSVISVDCDSDY
LDSASSKPWNKREISICDSPSAQSFTKPHFSLSEKTNSDVDDTDHFFAKKSEQLKSKTPT
HAITTDFEEDDFDVDDFDIDDFNDSDIPDYFDEPPTSSTWSENPNTTCAAVTKGGPNKAS
WDKKPLTPVSAPKPQKIYSPEPNFKNPAHDRFRGFNFPHSQEMMKIFHKRFGLHQFRFNQ
LEAINAALLGEDAFVLMPTGGGKSLCYQLPACLSPGVTVVVSPLKSLIVDQIQKLTTLDI
PATSLSGDKSDSEAGRIYMQLSCKDPIIKLLYVTPEKVSASNRLISALQNLYERGLLARF
VIDEAHCVSQWGHDFRPDYKKLHELRQKFPNIPMMALTATATPRVQKDILNQLNMSKPQV
FTMSFNRTNLKYAVLPKKPKKVDEDCISWIKKHYPRDSGIVYCLSRNDCDALAESLKRAG
IQALSYHAGLSDGDREYVQSKWINQDGCQVICATIAFGMGIDKPDVRYVIHASLPKSMEG
YYQESGRAGRDGEISHCILFYSYTDVHRIKRIISMDREGDKHAKTTHFNNLHSMVHFCEN
VMECRRIQLLAYFGELKFNRNFCKDHPDVSCDNCAKPNEYKLRKVTDDVNKIVRFVQENC
EKVGARFGKTPQQNRLTLNMLVDIFIGAKSAKIQTGMFGMGAAYSRHNADRLFKKLVLDN
VLVEDLYITNNGQAVSYISAGPKAMNILSGHMEVEFYETESASSIRKQRAAVKSISKREE
MVQNCLKELIDLCKQLGKAFGLHYYNIFSTAALKKISEKLSSDPEVLLQIDGVTEDKLEK
YGAEVIKVLQKYSEWQLPVDEQTESDGNGWIDTRRTEDDDTESSTYFSNQSARGQKRKKA
PFFKYSKKKAYGNQGSSSKGRGFGYNKSSSGSRGGSQSSGRGSTSSAAGKKLGFLSAPTP
QSNQRPFLKPTYSHFS
NT seq
4191 nt
NT seq
+upstream
nt +downstream
nt
atgtccagtctgcctcagaataatctgaaggaacagctggcgagacacaacaacgctact
cacaacaagctgtctctggctaaacctaaaacgggggctttctcgttcaaaaagaaatct
tcattgggtacaactaaagtggagtacccaacaaaggtaaacagcccaaacattttggca
aacaggaacgtgaatgtgctggggaacagtttggtgactaaatcttctttaacattttca
aacaagcttgaaagaactcagaaatccaaaatcaacaacttcttctctccaagtacaaat
tccaagtccaatttcagcctagcaggtaactccacttcaacatgtgaggagcccccagca
gatactggcggtaaggtgattgctgctcctgctaaacccaacaaccagtcctcctgtggt
ggcaaaggaatcggctccgcaggattagatttatctgatttacctgttgacgactgggat
gattttgaagactttgaaacacctgccaaaacaaaaaacgactccctctgctcagagaaa
tcagcgcgggtcaccgagacagtgtcatcctcagatgaagaatttccagagttcactgga
aaacaaagccatgattctggtcatttaaaatcggagttaagcgagaagaacagagaacaa
tcttgcatggagaaagaagagccggaatccagaattggtaaaacaacagtctcattagaa
cctagtttagttgacggacttccagacgatgaagtggaagatactcctgttaaaaggacc
agaaggcgctgtcctcctccacatgtcacatctgtgttgagtgatagcgatgaggagatc
agcaccatgtctgaaccttcaaaggataaaacagatgaaaagggaaaatggattgatccc
aaagtgatcaacctaaatgacaactctgaacctgaggaagatgtggattacattcctcct
tcacctcctcctgatgagactttttataggccttcttcagcagagacaagaagaactcac
tcagacattgtacagagcagagacaaacttttccagtcaaacagccctgccacaactctg
cttgaaccttctaatcacctctccagtgacaaaacaaaggatcaactcttcagcattatg
gagtccatctgtactctggtcgattccatccccgaacatgaactgatcgctttgacctgt
gggaatgaacttttgctaaagagggcccacaggaagaggattcttgcttgtggggttgat
tctttgcgcatgccgcagccagacagcacagtgatttctgacaccagctacaaagaaact
ttttccagttatagtgcatctagtctgacgtcccccagcagttccctctttttggacact
aagaaacctctgaattcccaaagatcatcagtaatctctgtggactgtgactctgactac
ttagacagtgccagttcaaagccctggaataagagggaaatcagtatttgcgactctccg
tcagcccaaagcttcacaaaaccacattttagtctctcagagaaaacaaactccgatgtt
gatgatactgatcatttcttcgccaagaaatcggaacaactcaaatccaaaacgccaaca
catgcaattaccacagactttgaagaagacgactttgatgttgacgattttgatatagat
gactttaatgattctgacatccctgattactttgatgaacctccgacttcgtctacgtgg
agtgaaaacccaaacactacatgtgctgctgtgacaaaaggaggaccaaacaaggcgtca
tgggacaagaaaccattgactcctgtttctgctccaaaacctcagaagatttattcacca
gagcccaacttcaaaaacccggctcacgatcgcttccgaggctttaacttccctcattcg
caggagatgatgaagatttttcataaacgttttggactccatcagttcagatttaatcag
ctggaagcgattaatgccgctttgctgggagaagatgcatttgttttgatgccaacagga
gggggtaaaagtttgtgctaccagctgcctgcctgtctctcacctggagtgactgttgtt
gtttctccgcttaagtcgcttattgttgaccagatccagaaactcaccactctagatatt
ccagcaacaagtctgtctggtgataaaagtgacagcgaggcagggaggatttatatgcag
ctctcctgcaaagacccaatcattaaactgctgtatgtcacacctgaaaaggtgagtgca
agcaacaggttgatctctgctctgcagaatctgtatgagcgaggccttctagcccgcttt
gtcatcgatgaggcacattgtgtcagtcagtggggtcatgattttcgtccagactacaag
aagttgcatgaactgcgtcagaagtttcccaacataccaatgatggccctgacggctacc
gccaccccccgtgtgcagaaagacatcctcaaccagctaaacatgagtaaaccgcaagta
ttcaccatgagtttcaacagaacaaacctcaagtacgccgttttgcccaagaaacccaaa
aaggttgacgaggactgcatcagctggatcaagaagcactacccacgagactctggcatt
gtatactgcctgtctcgtaatgactgcgatgccctggcagagagtctgaagagagcaggg
atacaggcactgtcgtaccacgccggactgagcgatggcgacagagaatatgtgcagagc
aaatggatcaatcaggacggttgtcaggtcatttgtgccacaatagcctttggtatgggt
atagacaagcctgatgtgcgctatgtgatccacgccagtctgcccaaatcaatggagggt
tactaccaggagtccggaagagccggcagagatggagagatctcccactgcattctgttt
tattcctatactgatgtccaccgcatcaaaaggatcatcagcatggaccgagaaggtgac
aaacacgccaagacaactcatttcaacaacctccacagcatggtgcacttctgtgagaat
gtgatggagtgcagaaggattcaacttctcgcctactttggagaactgaagttcaacaga
aacttctgtaaagaccatccggacgtcagctgtgataactgcgccaaacccaatgaatac
aaactgaggaaggtgaccgacgatgtgaataagattgtgaggtttgtccaggagaactgt
gagaaagttggagcacggtttggaaagacaccccagcaaaaccgactgacactgaacatg
ctcgtggacatatttataggggctaaatctgccaaaatacagacaggaatgtttgggatg
ggagccgcttactctcgccacaatgcagaccgtctcttcaagaaactggttctagataac
gttctggtcgaggatctctacatcaccaacaatggccaagccgtgtcttacatttctgct
ggaccaaaagcaatgaacatactgtccggtcacatggaggtggagttctatgagacggag
agcgcgtccagcatcaggaaacagagagctgctgtgaagagcatctccaagagagaggaa
atggttcagaattgtctgaaggagctgatagatctgtgcaagcagctgggcaaagcgttt
ggccttcactattacaacatcttctccactgctgccttgaagaagatatctgagaaactt
tcttccgatccggaggttcttttacaaattgatggagtgacggaggacaaactggagaag
tatggagctgaagtcattaaggttcttcagaaatactctgaatggcagctacctgtggat
gagcagactgaaagtgatggaaatggctggatagacacaagacgcacagaagatgacgat
acagagtcctccacctatttcagcaaccagtctgctcgaggacaaaagaggaagaaagct
cctttcttcaagtattctaagaagaaagcatacggcaaccaaggctcttcttctaaaggc
cgtggctttggctacaataaatcgtcctccggctccaggggtggctcccagagttcgggt
cgggggtctacgagttctgcagcaggcaaaaaactaggattcctgtctgcccccactcct
caaagcaaccagcggccgtttttaaagccaacctattctcacttcagctaa
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