KEGG   Poecilia mexicana (shortfin molly): 106921507
Entry
106921507         CDS       T08022                                 
Symbol
utp4
Name
(RefSeq) cirhin
  KO
K14548  U3 small nucleolar RNA-associated protein 4
Organism
pmei  Poecilia mexicana (shortfin molly)
Pathway
pmei03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:pmei00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    106921507 (utp4)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:pmei03009]
    106921507 (utp4)
Ribosome biogenesis [BR:pmei03009]
 Eukaryotic type
  90S particles
   U3 small nucleolar RNA-associated proteins
    106921507 (utp4)
SSDB
Motif
Pfam: Beta-prop_WDR3_1st Beta-prop_THOC3 WD40_CDC20-Fz WDR55 WD40_WDHD1_1st Beta-prop_WDR5 WD40 WD40_Prp19 Beta-prop_EML_2 Beta-prop_WDR3_2nd ANAPC4_WD40 Beta-prop_WDR36-Utp21_2nd Beta-prop_RIG_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_EML Beta-prop_WDR36-Utp21_1st Beta-prop_Aladin WD40_MABP1-WDR62_2nd Beta-prop_HPS5 Beta-prop_CAF1B_HIR1 Beta-prop_NUP159_NUP214 EIF3I Beta-prop_TEP1_2nd Beta-prop_Vps41 WD40_Gbeta RMC1_N Beta-prop_SCAP Ge1_WD40 DUF7165 PROPPIN Beta-prop_IFT140_1st Lactonase Beta-prop_WDR75_1st
Other DBs
NCBI-GeneID: 106921507
NCBI-ProteinID: XP_014848724
Ensembl: ENSPMEG00000000272
UniProt: A0A3B3X8K1
LinkDB
Position
Unknown
AA seq 688 aa
MIQMGEFKVHRVRFFDYMPSAIRSMAFNSHTERLAVARADGAVEIFNFADNYFQEKVIAG
RDGRSIEALCWVGCRLFSAGLDGEITEYDLENLRPRYSIEAYGGPIWTISSNSQGTLLAA
GCEDGTVKMFEVLEDRIQFQTNLSRQKGRIISLSWHPSGAQIAAGMMDMIKIFDSETGQA
THRLLVDRGVGTSKSREVVVWSVAFLNDHTIISGDSAGKVQIWDGLTGTLIRTHLVTKWD
VLVLAVSQDESSVIAGTSEGTIVQFQFLSSTVGQQDKLWVQTRTFKNHSHDVRALVHTDT
AVVSGGMDTQLVVRPLLDKVEKNSQESALRKIAFPHRNLVSCAKKAGLLLFQFPDHLELW
RLGESDRNGTPGESLPVKRKPEKLIQLKIKGEDHICCSALSPCGSWLAYATVAAVRLYRL
QLSSSNVSIQKVSKLPRELKSVHQLCFSSDSCRLFASSSFSSVVVVALDQTDCKYLHTLK
HKSGSKQPIHILSPSEDGQWLATANTDCEIHVFNLRKMKLHCSVPAYSSCPTAVSIHPTS
GNLVSVHADQQIFEFSLKQKEYSVWSRQLQRQGLHPLWLQRDTPVTQITFNPNNPAHIML
HDVFMFCIIDQSLPLPEAKSKLYNQRILQSLPEPQRLRESHAFKACKNFQHLLSVNLLED
LSLVVVERPLVDIVCQLPAPVRQKLFAT
NT seq 2067 nt   +upstreamnt  +downstreamnt
atgatccaaatgggggagtttaaagtgcaccgggtacgcttctttgactacatgcccagc
gccatccggtccatggccttcaacagccacacggagcggctggccgtggcccgagcagac
ggcgccgtggagatctttaactttgccgacaactacttccaggagaaggtcatcgctggg
cgggacgggaggtccatcgaggcgctttgctgggtcggctgtcgtttgttcagcgctggt
ttggacggggagatcacagagtatgacttggagaacctgaggcctcggtacagcatcgag
gcctacggaggaccaatctggacaatcagcagcaacagccaggggacactgctggcggct
ggctgtgaagacgggactgtgaagatgtttgaggtcctggaggacaggattcagtttcag
acaaacctgagcagacagaaaggtcggatcatatcgctgtcctggcatccgtctggtgct
cagatagcagcaggaatgatggacatgatcaagatctttgactcagaaacaggccaggcc
actcacaggctgctggtggaccgaggcgttggaacctcaaagagccgggaggtggtggtg
tggagcgtcgcctttctgaacgaccacactatcatcagcggcgattctgcaggaaaggtc
cagatctgggatgggttgactggaactctgatcagaacccatctggtcactaagtgggat
gtcctggttctggccgtttcacaggatgagagtagtgtgatcgctgggacgtctgaggga
accattgtccagttccagttcctctcctccactgtgggccagcaggacaagctctgggtc
cagaccagaacctttaagaaccactcgcatgacgttagggcgctggttcacaccgacacg
gccgtggtttctggaggtatggacacccagttggtggtgagacccctgctggacaaagtg
gagaagaacagccaggagtctgcgttacgtaaaattgctttcccacatagaaaccttgtt
agttgtgcaaagaaagctggacttctgctcttccagttcccggatcatttggagctgtgg
aggcttggagagagcgacagaaatggaacacctggagagagtctacctgtgaagaggaaa
ccagagaaactgatccagctgaagataaagggcgaggaccatatctgctgcagcgcgttg
tctccgtgtggaagctggttagcttacgccaccgtcgccgctgttcgtctctacaggctg
cagctcagcagcagcaacgtcagcatccaaaaggtgtccaagctgcccagggagctgaag
tcggtgcatcagctctgcttctcctcggactcctgcaggctgttcgcctcttccagcttc
tcctccgtcgtcgttgtcgctctcgaccagacggactgtaaataccttcacaccctcaaa
cacaagtctggctccaaacagccgatccacatcctgtctcccagtgaagacggtcagtgg
ctcgcgacggcgaacacagactgcgagatccacgtcttcaaccttcgaaagatgaagctg
cactgctcggtcccagcctacagctcctgccccacggccgtctccatccacccgaccagc
ggcaaccttgtctctgttcatgccgaccagcagatctttgagttctccctgaagcagaag
gagtacagcgtatggagccggcagctgcagaggcagggcctgcacccgctgtggctgcag
cgcgacacgcccgttacccagatcaccttcaaccccaacaacccggcgcacatcatgcta
cacgacgtgttcatgttctgcatcatcgaccagagtctgcctcttcctgaagcgaagtca
aagttgtacaatcagaggatcctccagagtcttcccgagccacagaggctcagagaaagc
cacgccttcaaggcctgcaagaacttccagcacctgctgtctgtgaacttgctggaggat
ctgtctctggttgtggtggagcgccccctggtggacatcgtgtgtcagctccctgctcct
gtgcggcaaaagttgtttgccacctaa

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