Poecilia mexicana (shortfin molly): 106921507
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Entry
106921507 CDS
T08022
Symbol
utp4
Name
(RefSeq) cirhin
KO
K14548
U3 small nucleolar RNA-associated protein 4
Organism
pmei
Poecilia mexicana (shortfin molly)
Pathway
pmei03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
pmei00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
106921507 (utp4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pmei03009
]
106921507 (utp4)
Ribosome biogenesis [BR:
pmei03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
106921507 (utp4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR3_1st
Beta-prop_THOC3
WD40_CDC20-Fz
WDR55
WD40_WDHD1_1st
Beta-prop_WDR5
WD40
WD40_Prp19
Beta-prop_EML_2
Beta-prop_WDR3_2nd
ANAPC4_WD40
Beta-prop_WDR36-Utp21_2nd
Beta-prop_RIG_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
Beta-prop_WDR36-Utp21_1st
Beta-prop_Aladin
WD40_MABP1-WDR62_2nd
Beta-prop_HPS5
Beta-prop_CAF1B_HIR1
Beta-prop_NUP159_NUP214
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_Vps41
WD40_Gbeta
RMC1_N
Beta-prop_SCAP
Ge1_WD40
DUF7165
PROPPIN
Beta-prop_IFT140_1st
Lactonase
Beta-prop_WDR75_1st
Motif
Other DBs
NCBI-GeneID:
106921507
NCBI-ProteinID:
XP_014848724
Ensembl:
ENSPMEG00000000272
UniProt:
A0A3B3X8K1
LinkDB
All DBs
Position
Unknown
AA seq
688 aa
AA seq
DB search
MIQMGEFKVHRVRFFDYMPSAIRSMAFNSHTERLAVARADGAVEIFNFADNYFQEKVIAG
RDGRSIEALCWVGCRLFSAGLDGEITEYDLENLRPRYSIEAYGGPIWTISSNSQGTLLAA
GCEDGTVKMFEVLEDRIQFQTNLSRQKGRIISLSWHPSGAQIAAGMMDMIKIFDSETGQA
THRLLVDRGVGTSKSREVVVWSVAFLNDHTIISGDSAGKVQIWDGLTGTLIRTHLVTKWD
VLVLAVSQDESSVIAGTSEGTIVQFQFLSSTVGQQDKLWVQTRTFKNHSHDVRALVHTDT
AVVSGGMDTQLVVRPLLDKVEKNSQESALRKIAFPHRNLVSCAKKAGLLLFQFPDHLELW
RLGESDRNGTPGESLPVKRKPEKLIQLKIKGEDHICCSALSPCGSWLAYATVAAVRLYRL
QLSSSNVSIQKVSKLPRELKSVHQLCFSSDSCRLFASSSFSSVVVVALDQTDCKYLHTLK
HKSGSKQPIHILSPSEDGQWLATANTDCEIHVFNLRKMKLHCSVPAYSSCPTAVSIHPTS
GNLVSVHADQQIFEFSLKQKEYSVWSRQLQRQGLHPLWLQRDTPVTQITFNPNNPAHIML
HDVFMFCIIDQSLPLPEAKSKLYNQRILQSLPEPQRLRESHAFKACKNFQHLLSVNLLED
LSLVVVERPLVDIVCQLPAPVRQKLFAT
NT seq
2067 nt
NT seq
+upstream
nt +downstream
nt
atgatccaaatgggggagtttaaagtgcaccgggtacgcttctttgactacatgcccagc
gccatccggtccatggccttcaacagccacacggagcggctggccgtggcccgagcagac
ggcgccgtggagatctttaactttgccgacaactacttccaggagaaggtcatcgctggg
cgggacgggaggtccatcgaggcgctttgctgggtcggctgtcgtttgttcagcgctggt
ttggacggggagatcacagagtatgacttggagaacctgaggcctcggtacagcatcgag
gcctacggaggaccaatctggacaatcagcagcaacagccaggggacactgctggcggct
ggctgtgaagacgggactgtgaagatgtttgaggtcctggaggacaggattcagtttcag
acaaacctgagcagacagaaaggtcggatcatatcgctgtcctggcatccgtctggtgct
cagatagcagcaggaatgatggacatgatcaagatctttgactcagaaacaggccaggcc
actcacaggctgctggtggaccgaggcgttggaacctcaaagagccgggaggtggtggtg
tggagcgtcgcctttctgaacgaccacactatcatcagcggcgattctgcaggaaaggtc
cagatctgggatgggttgactggaactctgatcagaacccatctggtcactaagtgggat
gtcctggttctggccgtttcacaggatgagagtagtgtgatcgctgggacgtctgaggga
accattgtccagttccagttcctctcctccactgtgggccagcaggacaagctctgggtc
cagaccagaacctttaagaaccactcgcatgacgttagggcgctggttcacaccgacacg
gccgtggtttctggaggtatggacacccagttggtggtgagacccctgctggacaaagtg
gagaagaacagccaggagtctgcgttacgtaaaattgctttcccacatagaaaccttgtt
agttgtgcaaagaaagctggacttctgctcttccagttcccggatcatttggagctgtgg
aggcttggagagagcgacagaaatggaacacctggagagagtctacctgtgaagaggaaa
ccagagaaactgatccagctgaagataaagggcgaggaccatatctgctgcagcgcgttg
tctccgtgtggaagctggttagcttacgccaccgtcgccgctgttcgtctctacaggctg
cagctcagcagcagcaacgtcagcatccaaaaggtgtccaagctgcccagggagctgaag
tcggtgcatcagctctgcttctcctcggactcctgcaggctgttcgcctcttccagcttc
tcctccgtcgtcgttgtcgctctcgaccagacggactgtaaataccttcacaccctcaaa
cacaagtctggctccaaacagccgatccacatcctgtctcccagtgaagacggtcagtgg
ctcgcgacggcgaacacagactgcgagatccacgtcttcaaccttcgaaagatgaagctg
cactgctcggtcccagcctacagctcctgccccacggccgtctccatccacccgaccagc
ggcaaccttgtctctgttcatgccgaccagcagatctttgagttctccctgaagcagaag
gagtacagcgtatggagccggcagctgcagaggcagggcctgcacccgctgtggctgcag
cgcgacacgcccgttacccagatcaccttcaaccccaacaacccggcgcacatcatgcta
cacgacgtgttcatgttctgcatcatcgaccagagtctgcctcttcctgaagcgaagtca
aagttgtacaatcagaggatcctccagagtcttcccgagccacagaggctcagagaaagc
cacgccttcaaggcctgcaagaacttccagcacctgctgtctgtgaacttgctggaggat
ctgtctctggttgtggtggagcgccccctggtggacatcgtgtgtcagctccctgctcct
gtgcggcaaaagttgtttgccacctaa
DBGET
integrated database retrieval system