KEGG   Poecilia mexicana (shortfin molly): 106921571
Entry
106921571         CDS       T08022                                 
Symbol
rab5c
Name
(RefSeq) ras-related protein Rab-5C
  KO
K07889  Ras-related protein Rab-5C
Organism
pmei  Poecilia mexicana (shortfin molly)
Pathway
pmei04137  Mitophagy - animal
pmei04144  Endocytosis
pmei04145  Phagosome
pmei04148  Efferocytosis
pmei05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:pmei00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    106921571 (rab5c)
   04145 Phagosome
    106921571 (rab5c)
   04137 Mitophagy - animal
    106921571 (rab5c)
   04148 Efferocytosis
    106921571 (rab5c)
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    106921571 (rab5c)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:pmei04131]
    106921571 (rab5c)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:pmei04147]
    106921571 (rab5c)
   04031 GTP-binding proteins [BR:pmei04031]
    106921571 (rab5c)
Membrane trafficking [BR:pmei04131]
 Endocytosis
  Rab GTPases and associated proteins
   Rab GTPases
    106921571 (rab5c)
 Endosome - Lysosome transport
    106921571 (rab5c)
Exosome [BR:pmei04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   106921571 (rab5c)
  Exosomal proteins of other body fluids (saliva and urine)
   106921571 (rab5c)
  Exosomal proteins of colorectal cancer cells
   106921571 (rab5c)
  Exosomal proteins of bladder cancer cells
   106921571 (rab5c)
GTP-binding proteins [BR:pmei04031]
 Small (monomeric) G-proteins
  Rab Family
   Rab5/17/22/31 [OT]
    106921571 (rab5c)
SSDB
Motif
Pfam: Ras Roc Arf Gtr1_RagA GTP_EFTU MMR_HSR1 RsgA_GTPase AAA_16 SDR-like MCR_beta BrnT_toxin B12-binding
Other DBs
NCBI-GeneID: 106921571
NCBI-ProteinID: XP_014848825
Ensembl: ENSPMEG00000011336
UniProt: A0A3B3X365
LinkDB
Position
Unknown
AA seq 220 aa
MAGRGGPARTNGTAASNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLT
QTVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVFDITNTDTFTRAKNWVKELQ
RQASPNIVIALAGNKADLASKRAVDFQEAQAYADDNSLLFMETSAKTAMNVNEIFMAIAK
KLPKNEPQGGAGPGGRARGGVDLQETAPQGRSGQCCGGGN
NT seq 663 nt   +upstreamnt  +downstreamnt
atggcagggcgaggtggaccagcacggaccaacggcaccgctgctagcaacaagatctgt
cagttcaaactagtgctactgggagaatcggcagttggaaagtccagcctggtgctgcgc
ttcgtcaagggccagtttcacgagtaccaagagagcaccatcggagctgccttcctcaca
cagacggtatgtttggatgatacaacagtcaagtttgagatctgggacactgcaggacag
gaacggtatcacagcttggcgcctatgtactacagaggagcccaggctgccattgtggtc
ttcgacatcaccaacacagatacgttcacacgtgcaaagaactgggtgaaggagctgcag
cgacaagccagccccaacatcgttattgcactggcaggaaacaaagccgacctggccagt
aagagagctgtagatttccaggaagcacaagcatatgcagacgacaacagcttgctcttc
atggaaacttcagccaagaccgcaatgaatgttaatgagatttttatggctatagccaag
aaacttccgaagaacgagcctcagggcggagcgggaccaggcggacgggccagaggtggc
gtggacctgcaggaaaccgctccacagggcagaagcggccagtgctgtgggggtggaaac
taa

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