Poecilia mexicana (shortfin molly): 106921571
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Entry
106921571 CDS
T08022
Symbol
rab5c
Name
(RefSeq) ras-related protein Rab-5C
KO
K07889
Ras-related protein Rab-5C
Organism
pmei
Poecilia mexicana (shortfin molly)
Pathway
pmei04137
Mitophagy - animal
pmei04144
Endocytosis
pmei04145
Phagosome
pmei04148
Efferocytosis
pmei05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
pmei00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
106921571 (rab5c)
04145 Phagosome
106921571 (rab5c)
04137 Mitophagy - animal
106921571 (rab5c)
04148 Efferocytosis
106921571 (rab5c)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
106921571 (rab5c)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pmei04131
]
106921571 (rab5c)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pmei04147
]
106921571 (rab5c)
04031 GTP-binding proteins [BR:
pmei04031
]
106921571 (rab5c)
Membrane trafficking [BR:
pmei04131
]
Endocytosis
Rab GTPases and associated proteins
Rab GTPases
106921571 (rab5c)
Endosome - Lysosome transport
106921571 (rab5c)
Exosome [BR:
pmei04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
106921571 (rab5c)
Exosomal proteins of other body fluids (saliva and urine)
106921571 (rab5c)
Exosomal proteins of colorectal cancer cells
106921571 (rab5c)
Exosomal proteins of bladder cancer cells
106921571 (rab5c)
GTP-binding proteins [BR:
pmei04031
]
Small (monomeric) G-proteins
Rab Family
Rab5/17/22/31 [OT]
106921571 (rab5c)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ras
Roc
Arf
Gtr1_RagA
GTP_EFTU
MMR_HSR1
RsgA_GTPase
AAA_16
SDR-like
MCR_beta
BrnT_toxin
B12-binding
Motif
Other DBs
NCBI-GeneID:
106921571
NCBI-ProteinID:
XP_014848825
Ensembl:
ENSPMEG00000011336
UniProt:
A0A3B3X365
LinkDB
All DBs
Position
Unknown
AA seq
220 aa
AA seq
DB search
MAGRGGPARTNGTAASNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLT
QTVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVFDITNTDTFTRAKNWVKELQ
RQASPNIVIALAGNKADLASKRAVDFQEAQAYADDNSLLFMETSAKTAMNVNEIFMAIAK
KLPKNEPQGGAGPGGRARGGVDLQETAPQGRSGQCCGGGN
NT seq
663 nt
NT seq
+upstream
nt +downstream
nt
atggcagggcgaggtggaccagcacggaccaacggcaccgctgctagcaacaagatctgt
cagttcaaactagtgctactgggagaatcggcagttggaaagtccagcctggtgctgcgc
ttcgtcaagggccagtttcacgagtaccaagagagcaccatcggagctgccttcctcaca
cagacggtatgtttggatgatacaacagtcaagtttgagatctgggacactgcaggacag
gaacggtatcacagcttggcgcctatgtactacagaggagcccaggctgccattgtggtc
ttcgacatcaccaacacagatacgttcacacgtgcaaagaactgggtgaaggagctgcag
cgacaagccagccccaacatcgttattgcactggcaggaaacaaagccgacctggccagt
aagagagctgtagatttccaggaagcacaagcatatgcagacgacaacagcttgctcttc
atggaaacttcagccaagaccgcaatgaatgttaatgagatttttatggctatagccaag
aaacttccgaagaacgagcctcagggcggagcgggaccaggcggacgggccagaggtggc
gtggacctgcaggaaaccgctccacagggcagaagcggccagtgctgtgggggtggaaac
taa
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