Poecilia mexicana (shortfin molly): 106921844
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Entry
106921844 CDS
T08022
Symbol
ddb2
Name
(RefSeq) DNA damage-binding protein 2 isoform X1
KO
K10140
DNA damage-binding protein 2
Organism
pmei
Poecilia mexicana (shortfin molly)
Pathway
pmei03420
Nucleotide excision repair
pmei04115
p53 signaling pathway
pmei04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
pmei00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
106921844 (ddb2)
09124 Replication and repair
03420 Nucleotide excision repair
106921844 (ddb2)
09140 Cellular Processes
09143 Cell growth and death
04115 p53 signaling pathway
106921844 (ddb2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pmei04121
]
106921844 (ddb2)
03400 DNA repair and recombination proteins [BR:
pmei03400
]
106921844 (ddb2)
Ubiquitin system [BR:
pmei04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
106921844 (ddb2)
DNA repair and recombination proteins [BR:
pmei03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cul4-DDB2 complex
106921844 (ddb2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
WD40
Beta-prop_RIG_2nd
Beta-prop_EML_2
WDR55
Beta-prop_EIPR1
Beta-prop_IFT140_1st
Beta-prop_TEP1_C
EIF3I
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
WD40_RFWD3
Beta-prop_WDR19_1st
Beta-prop_TEP1_2nd
Beta-prop_Vps41
Motif
Other DBs
NCBI-GeneID:
106921844
NCBI-ProteinID:
XP_014849293
Ensembl:
ENSPMEG00000021134
UniProt:
A0A3B3XT75
LinkDB
All DBs
Position
Unknown
AA seq
492 aa
AA seq
DB search
MKSKPTKSQANGSKSKVKKGAAEDTSLSKKLRDKIDGETSNAGPSYSSGGVQRKNGPGSI
LHYIYKSSLGQSLRSQMRQCLQEPFVRSLSSYHFHGASSPFDRRITCLEWHPTHPTTVAA
ASKGGDIFLWDFEKSETKSFTRGNGAGDFIGGMKFCPTDFSRVYAASGEGTLTLHSFEGH
TPTLLSRTQDCGHDHHNVCFWYCCVDVSVSRQMLVTGDNMGELLLLGLDGKRIFSSKLHK
AKVTHAEFNFRCDWLLATASVDHTVKLWDLRNIKDKTSFLYEMPHERAVNSAYFNPLDAS
KLLTTDQHDQIRVYSSSDWSKPHHIIQHPHRQFQHLTPIKATWHPLYDLIVAGRYPDDRI
CTGDQRTIDVFDSNSGELVFQMYDSTASGIKSINKFSPMGDVIGSGMGVTLLIWDHDESL
VSGRHKPIEETSASADGVRGQRRGQQRSGRDRRGPTGDAKLKKKLASLEETETKTETKTG
CTKQKQTRKRKL
NT seq
1479 nt
NT seq
+upstream
nt +downstream
nt
atgaaaagcaagcccaccaagtcacaggcaaatggatcaaaaagtaaagtgaagaaaggt
gctgcggaagacacgtcgctgagtaaaaaactgcgagacaagatagatggagaaacatca
aatgcagggccttcttacagttctggaggagtccagaggaagaatggccctggaagtatc
ctgcactatatatacaagagttctttgggccagagtctccgctctcagatgagacagtgc
ctgcaggagccgtttgttcgatctctgtcttcctaccattttcatggcgccagcagtcca
tttgatcgcagaatcacctgcttggagtggcatcccactcatcccaccactgtggctgca
gcctcaaaagggggggacatttttctgtgggactttgagaagtctgaaacgaaaagcttt
actcgagggaacggagcgggagacttcattggcgggatgaagttttgccccacagacttc
tccagagtttatgcggcttctggcgaggggacattgaccctgcatagctttgagggacac
actcccaccctgctgtccagaacgcaagactgtggtcatgatcaccacaatgtttgcttt
tggtactgctgtgtcgacgtgtctgtgagtcggcagatgcttgtgactggggacaacatg
ggagagcttctgcttctgggtctggatgggaaaaggattttcagcagtaagttgcacaaa
gccaaggtgacgcatgcagagtttaacttccgatgcgactggttgctggcgacggcctcg
gttgaccacacggtgaagctctgggacctgaggaacatcaaggacaagacgagcttcctc
tacgaaatgcctcacgagagagccgtcaactcagcgtatttcaaccctttggacgcctcc
aagctactcacaacagatcagcacgaccagatccgggtgtactcctcctctgattggtcg
aagcctcatcacatcattcagcacccacacaggcagtttcagcacctcacacccatcaag
gccacctggcatcccctgtatgacctgattgtggcgggccgataccctgatgaccgcatc
tgcaccggagatcagaggaccattgacgtctttgactccaacagtggggagttggtgttt
cagatgtatgattccacggcctcggggatcaaatctatcaacaagttcagtccaatgggt
gacgtcatcggatctggaatgggcgtgacactactgatctgggaccacgacgagtcgctg
gtcagcggccgacacaaaccgatcgaggaaacgtcggcttcagcggacggggtcagaggt
cagcggaggggtcagcagcgctctggcagagaccggaggggtccgaccggggatgcaaag
ctgaagaaaaagctagcttctctggaagaaaccgagaccaagaccgaaaccaaaaccggg
tgcaccaaacaaaaacaaactcggaagaggaaactgtag
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integrated database retrieval system
