Poecilia mexicana (shortfin molly): 106922098
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Entry
106922098 CDS
T08022
Symbol
copb2
Name
(RefSeq) coatomer subunit beta'
KO
K17302
coatomer subunit beta'
Organism
pmei
Poecilia mexicana (shortfin molly)
Brite
KEGG Orthology (KO) [BR:
pmei00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pmei04131
]
106922098 (copb2)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pmei04147
]
106922098 (copb2)
Membrane trafficking [BR:
pmei04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Coat protein complex I (COP-I)
106922098 (copb2)
Exosome [BR:
pmei04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
106922098 (copb2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
B-prop_COPA_B_2nd
TPR_COPA_B
WD40
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_EML_2
WDR55
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_EML
EIF3I
Beta-prop_WDR75_1st
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_2nd
Beta-prop_TEP1_C
Beta-prop_EIPR1
Beta-prop_RIG_2nd
WD40_MABP1-WDR62_1st
Beta-prop_HPS5
NBCH_WD40
Beta-prop_IFT140_1st
Beta-prop_SCAP
Beta-prop_IFT122_1st
ANAPC4_WD40
WDR90_beta-prop_4th
PEP5_VPS11_N
WD40_RFWD3
Beta-prop_WDR35_TULP_N
Beta-prop_DCAF4
Beta-prop_LRRK2
WD_LRWD1
DUF7688
Beta-prop_IP5PC_F
Motif
Other DBs
NCBI-GeneID:
106922098
NCBI-ProteinID:
XP_014849713
Ensembl:
ENSPMEG00000002365
UniProt:
A0A3B3Y3D1
LinkDB
All DBs
Position
Unknown
AA seq
1190 aa
AA seq
DB search
MPLRLDIQRRLTARSERVKSADLHPTEPWMVLSLYTGTVVVWNHETQAIVKSFELCDLPV
RVAKFVARKHWIITGADDMQIRVFNYNTLDRVFMFEAHCDYIRCVAVHPTQPFVLTSSDD
MLIKLWDWDRKWTCCQVFEGHAHYVMQVVFNPKDNNQFASASLDRTIKVWQLGSKSPNFT
LEGHEKGVNCIDYYNGGDKPYLISGADDHLVKIWDYQNKTCVQTLESHVQNVTCVCFHPE
LPVILTGSEDGTVRVWHSNTYRLENTLNYGLERVWCICGQSGSNNIALGYDEGSIIIKLG
REEPAMSMDSSGKIMWARHSEVQQANLKTLGETEIQDGEKLPLGAKDMGSCEIYPQTIQH
SPNGRFVVVCGDGEYIIYTAMALRNKSFGSAQEFVWAHDSSQYATREGNSVVKIFKNFKE
KKTFNPDFGADGIFGGFLLGVRSTSGLAFYDWESSSLIRRVEILPKHMFWSDSGELVCIA
TEESFFVLRYLTERVSAAQESKETLTEDGIEDAFEVLGEVQEVVKTGLWVGDCFIYTSSV
NRLNYYVGGEIITIAHLDRTMYLLGYIPKDDRLYLGDKELNVISYSLLLSVLEYETAVMR
KDFTMADRVLPTIPVEQRTRVAHFLEKQGFRQQALAVSTDLEHKFELALQLGELGVAHEL
ALEAESEHRWKQLAEVASTKGQFSLAQECLHQAQDYGGLLLLATASGRADIVGKLAEGAE
KDGKTNVAFLTYFIQGRTDKCLELLIKTDRLPEAAFLARTYMPSQVSRVVKLWKENMSKV
NQKAADALAVPDQYNNLFPGLQQALLAEQYLKETHVGVRPAAEYPLIVSNEDRDVLEESK
GFITKGEMTEPGEAERSMNESPAASSEATVMEEPIPIQHEPPSDPVPETEKIFSFPEEAP
LSVFATKDYVESNPALSECRVKGENIMKSETLLIPEERLIQKPCTEVPAKDSEAVQSSPV
EGVDLSDEVADQGVASAAEAQPDITASGEEETQTADDELISTDLKAKSVIASESAALEET
SSPDQLETDTVPLVAIATEETPIAKLPVAVEELVSLEPTERSLLAVPSVAGQAFSDPILD
SSLDSDEDASAALKPVAVWEDEQEQEEKTAEPPAEMEDGSEAGDIPEAEPEGSDDPAEAN
VAEQEAGSEGTHDLTEDLEEAIDHEDLDDLDLDSFELEDIDTSDMNLLGE
NT seq
3573 nt
NT seq
+upstream
nt +downstream
nt
atgcctctgaggttggacatccagcggaggctgacagctcggtcagagagagtgaagagt
gccgacctgcaccccactgagccgtggatggtgctcagcctctacaccggcactgttgtc
gtctggaaccatgaaacacaggcaattgttaaatcctttgagttgtgcgatctgcctgtt
agagtggccaagtttgtagccaggaaacactggatcattaccggagcagatgacatgcag
atccgtgtgttcaactacaacacgctagacagggtcttcatgtttgaagcccactgcgac
tacatccgctgcgtcgctgtgcaccccacgcagccctttgtcctcaccagcagcgatgac
atgctgatcaaactgtgggactgggacagaaagtggacgtgctgtcaggtgtttgaggga
cacgcacactacgtcatgcaggtcgtcttcaaccctaaagacaacaaccagtttgccagt
gcctctctagacagaaccattaaggtgtggcagttgggctccaagtctcccaatttcact
cttgagggtcacgagaaaggagtgaactgcattgattactataacggaggagacaagccc
taccttatatcaggagcagatgatcatcttgtgaagatctgggattatcagaacaaaacg
tgtgttcagaccctggagagtcatgtgcagaatgtgacctgcgtctgcttccaccctgaa
ctgccggtcatcctcacaggatctgaggacggcactgtcagagtttggcactccaacacc
tacagacttgaaaacacacttaattacgggctggaacgagtgtggtgtatatgtgggcag
tctggctccaacaatatagctctgggctatgatgaaggcagcatcatcattaagctgggt
cgggaggagccggccatgtccatggactccagtgggaaaatcatgtgggcccgtcattct
gaggtgcagcaggccaacctgaagacgctgggagagacagagattcaggacggagagaag
ctcccacttggtgccaaagacatgggcagctgtgagatttacccacagaccattcaacac
agccccaatggcagatttgtagtggtgtgtggagatggggaatatatcatctacaccgcg
atggccttgaggaacaaaagctttggctctgctcaggagtttgtctgggcacacgactcc
tcacagtatgccacgagggagggcaatagcgtggtgaaaatatttaaaaactttaaagag
aagaagactttcaaccctgattttggggctgatggcatctttggtggcttcttactggga
gtgaggtcaaccagcggactggctttctatgactgggaaagctccagtttgatccgccgt
gttgagatcctgcctaaacatatgttctggtctgactctggggagctggtgtgtattgct
acagaagagtccttctttgtgttgcgctacctgacagagcgagtgtcagcagcacaggag
tctaaagaaacactgacagaggatgggatagaagatgcgtttgaggtactgggtgaggtc
caggaggttgtaaagacaggtctgtgggtcggagactgcttcatctataccagctccgtg
aacagactcaactactatgttggaggagagatcataactattgctcacctggacaggacc
atgtatctgctgggctacatcccaaaggacgaccgtctctatctaggagacaaggagctc
aacgtcatcagttactccctgctgctgtctgtgctggaatatgagacagctgtcatgagg
aaagatttcaccatggctgacagggtccttcccacaataccagtggagcagaggaccagg
gtcgcccacttcctggagaaacagggcttcagacagcaggcgctggcggtgtccactgac
ctggaacacaagtttgagcttgctctgcagctgggcgagctgggggtggcgcatgaactg
gcactggaggcagagtctgagcatagatggaagcagttggccgaagttgcctctacaaag
gggcagttcagcctggctcaggaatgtctgcaccaagctcaggattatggtggattactt
ctgctggcaaccgcctcaggcagggcagacatagtagggaaactggccgagggagcggag
aaagatgggaagaccaacgtggccttcctcacctacttcattcaaggaagaactgacaaa
tgtttggagctgcttattaaaactgatcgattgccagaggctgctttcctggcaagaaca
tacatgcccagccaagtctcaagggtggtgaagctgtggaaggagaacatgtccaaggtt
aaccagaaggcagcagatgcgctggctgtcccggatcagtacaacaacctgttccctggc
ctccagcaagctctgctggctgagcagtacctaaaggagactcatgttggggtcagacct
gctgcagaataccccctcatcgtgtcaaacgaggaccgtgatgttctggaggagtccaaa
ggttttatcaccaaaggagagatgactgagccaggggaggcagagagaagcatgaatgaa
agccctgctgcatcttcagaagcaacggtaatggaagaacccattccaatacaacatgag
cctccttctgatcctgttccggagacagagaaaatatttagttttccagaggaagctcct
ctgtctgtctttgccaccaaagactatgttgagtcaaacccagcactgtctgagtgtcga
gttaaaggggaaaacatcatgaaatcagagactttacttattccagaggaacgcttgatc
cagaaaccctgcactgaggttcctgccaaagactcagaggctgtacagtccagtccagtc
gaaggtgtagatttatctgatgaggtggctgatcagggcgtagcttcagcagctgaagct
cagccagatatcacggcatctggagaggaagaaacacaaacggcagatgatgagctaatt
agcacggatctaaaagccaagtctgtaattgcatcagaatctgcagcattagaggaaaca
tccagccctgatcaactggaaacagacaccgttcccttggttgctatagcaacagaagaa
actccaattgcgaagctacctgtagcagtagaggagctcgtctctttagaaccaacagaa
cgttccctgctggctgttccatcagtcgcgggccaggctttttcagatccgatcctcgat
tcatcgctagactcagatgaagatgcatcagcggcgttgaagccggtcgcagtgtgggag
gatgagcaagaacaagaggagaaaactgcagaacctccagcagagatggaggatgggtcg
gaagcgggcgatattcctgaggctgaaccagaaggatcagacgacccagcagaggcgaac
gtggcagagcaggaagcaggctctgaaggaacacatgacctaacagaagatctcgaggaa
gcaatcgaccatgaggaccttgatgatctggatctggacagttttgaactggaggacatc
gacacctcagacatgaatctgctgggtgaatag
DBGET
integrated database retrieval system
