Poecilia mexicana (shortfin molly): 106922484
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Entry
106922484 CDS
T08022
Symbol
trip12
Name
(RefSeq) E3 ubiquitin-protein ligase TRIP12 isoform X1
KO
K10590
E3 ubiquitin-protein ligase TRIP12 [EC:
2.3.2.26
]
Organism
pmei
Poecilia mexicana (shortfin molly)
Pathway
pmei04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
pmei00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
106922484 (trip12)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pmei04121
]
106922484 (trip12)
Enzymes [BR:
pmei01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
106922484 (trip12)
Ubiquitin system [BR:
pmei04121
]
Ubiquitin ligases (E3)
HECT type E3
106922484 (trip12)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HECT
WWE
Motif
Other DBs
NCBI-GeneID:
106922484
NCBI-ProteinID:
XP_014850422
Ensembl:
ENSPMEG00000023767
LinkDB
All DBs
Position
Unknown
AA seq
2066 aa
AA seq
DB search
MSNRPNSNPGGSLRRSQRNTAAAQPQDHTAAGRLQSEQVKHKPNSPPESRRPNSKAPKAT
ASSATGQSRGHSSRRSGLNLSVGSLVLQDDSQAAGTSEQERPGHQSKSEGTRGLKRSDAP
DQISVLGPTPSKKPKSVPPPKSNTSETKKGPAKSKKRQASSEAPASTGRNQNKKSAASSA
SPVQKRKKSDSFPGLSSTAGSLPNCTEGRTAKPTKLASKSAASAKAGCSNVTDSSSSASS
SSSSSTTGTNSAATQGARLKQGKDQTKARRSRSASSPSPRRSTRDKEQAKTASSSKFDWA
TRFNPKVNLPKPKLSLPGTSKTETSKPGPSGLQAKLASLRKSTKKRSESPPAELPSFRRS
TRQKTTGSCASTSRRGSGLGKRGAADARRQEKMADSDNNQDGANSSAARTDEASQGASAS
SSVAGAVGMTTSGESESDDSEMGRLQALLEARGLPPHLFGPLGPRMSQLFHRTIGSGASS
KAQQLLQGLQATGDESQQLQAAIEMCQLLVMGNEETLGGFPVKSVVPALITLLQMEHNFE
IMNHASRALTYMMEALPRSSAVVVDAIPVFLEKLQVIQFIDVAEQALTALEMLSRRHSKA
ILQARGLAHCLLYLEFFSINAQRNALAIAANCCQSITPDEFHFVDDSLSLLTQRLTHQDK
KSVESTCLCFARLVDNFQHEENLLQQVASRDLLTNIQQLLVVTPPVLSSGMFIMVVRMLS
LMCSNCPSLAVQLMKQNIAETLRFLLCGASNGSCQEQIELVPRSPQELYELTSLICELMP
CLPREGIFAVDAMLKKGSVQTTEGAIWQWRDDRGLWHPYNRIDSRIIETAHQNGEDEISL
STLGRVYTIDFNSMQQINEDTGTARGIQRKPNPLANPNTGSHQEVRREDARAQLMKEDPE
LAKCFIKTLFGVLYEVYSSSAGPAVRHKCLRAILRIIYFADAELLKDVLRNHAVSSHIAS
MLSSQDLKIVVGSLQMAEILMQKLPDVFSVYFRREGVMHQVKNLAESESFLVTSPPKACS
SGTASLCTTTITSVSTTSANIATPDLGSPSFQHSMDDSLDLSPQGRLSDVLKRKRLPKRG
PRRPKYSPPRDDDKADNQVFFAAKSPTSTQSPKSSFLASLNPKTWGKLGAQTNNANSEPS
RTAGVSGLARAPPKDSISNNRDKIKAWIKEQASKFVERYFNSENVDGSNPALNVLQRLCT
ATEQLNLQVDGGLECLVEISNIVSESDVSSFEIQHSGLVKQLLIYLTSNADRDLLRRDVR
LKRFLNIFAGCPYLKKLPGVEPIGRLDPTNNSAYLALVHKMNSCLSQMEQFPVKVHDFPS
GNGNGSRGSQALKFFNTHQLKCQLQRHPDCTNVKQWKGGPVKIDPLALVQAIERYLVVRG
YGRIREEDEDSDDDGSDDEIDESLAAQFLNSGSVRHRLQFYIGDHLLPYNMTVYQAVRQY
SLQAEEERESTDDEANPLGRAGIWTKTHTIWYKPVREDEEGSKDSVGGKRGRAQTAPTKT
SPRNAKKQDELWHDGVCPGVANPLETYLTTEPPETITFDDPSLEVTLLLRILHSISRFWF
YLYDNAACKEIIPTSEFINSKLTAKANRQLQDPLVIMTGNIPTWLIELGKTCPFFFPFDT
RQMLFYVTAFDRDRAMQRLLDTNPEINQSDSQDSRVAPRLDRKKRTINREDLLKQAESVM
QDLGSSRAMLEIQYENEVGTGLGPTQEFYALVSQELQRADLGLWRGEEITLANPKGNQEG
TKYMFNSRGLFAVPFGRTTKPAHIAKIKMKFRFLGKLMAKAIMDFRLLDLPLGLPFYKWM
LRHETSISSHDLMNIDPSVAKSIQHLEDIIRQKKRLEQDRSQTRETLQQALESLNMNGCS
VEDLGLDFTLPGFPNIELKKGGKDVPVTIYNLEEYLRLVVYWTLNEGVSRQFDSFREGFE
SVFPLHHLQYFYPEELDQLLCGSKSETWDVKTLMECCRPDHGYTHDSRAIRFLFEVLSSF
DAEQQRLFLQFVTGSPRLPVGGFRSLNPPLTIVRKTFESTENPDDFLPSVMTCVNYLKLP
DYSSIEIMREKLLIAAREGQQSFHLS
NT seq
6201 nt
NT seq
+upstream
nt +downstream
nt
atgtccaaccggcctaattccaatccaggggggtcactgcgccgttcacagaggaacact
gctgcggcccagccacaagaccacacagcagctggaaggttgcagtcagagcaggtaaaa
cataaaccaaattccccacctgaaagtagaagacctaattctaaggctcccaaagccact
gccagctcagccactggccagtccagagggcacagctcaagaagaagcggtcttaaccta
tcagtgggttcattagtgctgcaagacgactcgcaggctgcgggaacatccgaacaggaa
cgaccaggccaccagtcaaagagtgagggcaccagagggctcaaacgaagcgacgctcct
gaccaaattagcgtccttgggcccaccccttccaagaagcccaaatcagtcccaccaccc
aaaagcaatacctcagagaccaagaaaggtccagctaagtctaagaagagacaggcttct
tcagaggcacctgcatcgacaggtcgaaatcagaacaagaagagtgcggccagctcggcc
tctccagtccagaaacggaaaaaatcagactctttcccaggtctaagtagcaccgctggg
tctctacccaattgtaccgaaggcagaactgcaaaaccaaccaagctggcgtctaaatcg
gccgcctcagccaaagctgggtgtagcaacgtgacagactcgtcctcctctgcctcctcc
tcttcttcttcctctaccacaggcaccaacagtgctgctacgcagggcgcccgtttaaaa
cagggaaaagatcagacaaaagctcgtcgttccagatcagcatctagtccctctccgcgt
cgcagtacacgggacaaggagcaggccaaaactgccagctcttcaaagtttgactgggca
acacgcttcaaccccaaagtaaacctgccaaaacccaaactttccttacctggaacttcc
aaaactgagacctccaaacctgggccatctggactacaagctaaactagcaagtttgagg
aaatccacaaagaagcgcagcgagtctcctccagcagagctccccagttttcggcggagc
acacgccagaagaccacgggctcctgtgccagcaccagtcggcggggctcaggcctgggc
aagcgcggggcagccgacgctcgccgacaggagaaaatggctgactccgacaacaaccaa
gatggggccaattcatcagctgctcgcactgatgaggcgtcacaaggagcttcagcttca
agctcagttgccggagcagtgggcatgaccacttctggagagagtgagtctgatgattca
gaaatgggaaggcttcaagcgcttctggaagccagaggtctcccaccacatctttttgga
cccctggggccccgcatgtcgcagctgtttcacaggaccataggcagtggagccagttcc
aaggcccagcagctgctgcagggcctccaggccacaggggacgagtctcaacagctccaa
gctgccattgagatgtgccagctgctggtgatgggcaatgaggaaactcttggtggattt
cctgtcaaaagtgtagtgcctgctttgattacactgttacagatggagcataattttgaa
attatgaatcatgcatcgcgtgcgctcacttacatgatggaggcacttcctcgttcttct
gctgtcgtggttgacgctattcctgtcttcctggagaaacttcaggtgatccagttcata
gacgtagcagaacaagccctcacagccttggaaatgttgtcaaggcgacacagcaaagcg
attttacaggctagaggcctggctcactgcctcctctacctggagttcttcagcatcaat
gcccagaggaatgcgttggccatagcagcgaactgctgccagagcattactccagacgag
tttcactttgttgatgattcgctctcactgttgactcagagacttacacatcaggataag
aagtccgttgaaagcacttgtctttgttttgccagactggtggacaactttcaacatgaa
gagaacctgctgcagcaggtggcatcgagggacctgttgaccaacatccagcagttgcta
gttgtgacgcctcctgttctcagctcggggatgtttattatggttgtgcgcatgctctcg
ctgatgtgctccaactgcccaagtctggcagtccagcttatgaaacaaaacatagcagaa
actctgcgtttcctcttgtgcggtgcatcaaatggaagctgccaggaacaaattgagctc
gtacctcgaagcccccaggaactctacgaactgacctccctcatttgtgaattgatgccc
tgcctccccagagagggcatctttgcagttgacgctatgctgaagaaaggcagtgttcaa
acaacagagggtgcaatctggcagtggagggatgaccggggcttgtggcatccttacaac
cgcatcgacagccgcatcattgagacggcccaccagaacggagaagatgagatcagcctg
tcaaccctgggccgtgtatacacaattgacttcaactctatgcagcagataaatgaagac
acaggaacagcacgcggtatccagaggaagcctaatcctcttgccaatcctaacacaggg
agtcaccaagaggttcgtcgggaagatgcaagagcccagctgatgaaggaggaccctgag
ctggcgaagtgctttattaaaacactgtttggggtcttgtatgaggtctacagctcatca
gctggccctgctgtccgacacaagtgccttagagccatcctcaggatcatatactttgct
gacgccgagctgctgaaggatgtgctgaggaaccatgctgtgtccagtcacattgcctcc
atgctgtccagccaggacctgaagattgtggttggatctctgcagatggcagagatcctc
atgcagaagctgcctgatgtcttcagtgtctattttagaagagaaggtgtaatgcatcaa
gtaaagaaccttgcagagtctgagagctttcttgtcactagtcccccaaaggcctgctcc
agtggtactgccagcctctgtaccacaacaatcaccagtgtatccacgacatcagctaac
attgcaactcctgacctgggctcccccagctttcagcacagcatggacgactcgctggac
ctcagtccccaggggcggttaagtgatgtcctaaagagaaaacgccttccaaaaagagga
cccagaaggcctaagtactctccgccaagagacgatgataaagcagacaatcaggtcttc
tttgcagccaagagccccaccagtactcagtcacccaagtcgtcgttcttggccagcctc
aaccccaagacctgggggaagctgggagctcaaactaacaatgccaactctgagccatca
cgcacagccggagtaagcggcctggcaagagcgcctcccaaagactcgatttcaaataac
agagataaaattaaggcctggattaaagagcaggcaagtaaatttgtggagcgctacttc
aactctgagaatgtggacggcagcaaccctgctctgaacgttctccagagactttgcacg
gccaccgagcagctgaacctgcaggtggatggtgggttggagtgcctggtggaaatctct
aacatcgtgtcagaatctgacgtgtcatcgtttgagatccagcacagcggcctggtgaag
cagcttctgatctaccttacctccaacgcggacagagacctgctccgtcgtgacgtgcgg
ctgaagaggttcctcaacatcttcgctggttgtccgtatttgaagaagctgccaggcgtt
gagcctataggtcgtctggatccgacaaataactcggcgtacctggcactcgtacacaag
atgaacagttgtctgagccaaatggagcagttcccagtcaaggtgcacgactttcccagt
ggcaatggcaacggcagcaggggatctcaggcactgaagttcttcaacacacatcagctc
aagtgtcagctgcagaggcacccagactgcactaatgttaaacagtggaaaggcggccct
gtgaagattgacccgctggccctggtgcaagcgattgagagatatcttgtggtcagaggc
tatggtagaatcagggaagaagatgaggacagcgacgatgacggttcagatgatgaaata
gacgaatcattggcggcacagttcctaaattctggcagcgtgcgtcacagactacagttc
tacattggtgaccacctgctgccatacaacatgacggtgtaccaggctgttcggcaatac
agtcttcaggcagaagaggagcgggagtcgacagacgacgaagcaaatccactggggagg
gctggaatctggaccaaaacgcacacaatatggtataagcctgtgagagaagacgaggaa
ggcagtaaggactcggtgggtggaaagcgaggcagagcccagactgctcccactaaaacc
tcaccgcgcaacgccaagaaacaggatgagctgtggcatgatggcgtatgtcccggcgtc
gccaatcctttggaaacatacctcactacagagccaccagagaccataacctttgatgac
ccctctttagaggtcaccctgctgctgaggatccttcactccatcagtcgattctggttc
tatttgtacgataatgctgcgtgtaaggaaattattccaacctccgagttcattaatagt
aaactgactgccaaagccaatcgtcagctacaagacccgctggtcatcatgacggggaac
atccccacctggcttatcgagctgggaaagacctgccccttcttcttccccttcgacact
cggcagatgttgttttatgtcaccgccttcgatcgagacagagccatgcagcgcctgctg
gacacaaaccccgagatcaaccaatcagattctcaggacagcagagtcgcaccacgtctg
gacaggaaaaagagaacgataaaccgtgaggatctattaaaacaggcagagtctgtgatg
caggaccttggcagctccagggcaatgctggagattcagtatgagaatgaggtgggcaca
ggtctcggtcccacgcaggagttctacgctctggtgtctcaggagcttcagagagcggac
cttggtctttggagaggcgaagagattactctggccaatcctaaaggaaaccaagagggc
actaagtacatgttcaactccagaggactgtttgctgtccccttcggcagaacaacaaaa
ccagcacacatagccaaaatcaaaatgaagttccgtttcttaggaaagttgatggccaaa
gcaattatggactttagactgctggatctgccgttggggcttccgttttataagtggatg
ctgcgacacgagacgtctataagctctcacgacctgatgaacatcgatccaagtgtggcc
aagtccatccagcacctggaggatatcattcgtcagaagaagaggttggaacaggaccga
tcacagaccagagaaaccctccagcaggccctagagagcctgaacatgaacggctgctcg
gtggaggacctgggcctggacttcactctgcctggcttcccaaacatcgaactgaaaaag
ggcgggaaagacgtgccagtcacaatctacaacctcgaggagtacctcaggttggtggtg
tactggaccttaaatgaaggagtatcaagacagtttgactcattcagggaagggtttgag
tcggtcttccctttgcatcacctgcagtatttctaccctgaagagctggaccagttgctg
tgtggcagtaaatcagagacgtgggatgtgaagacgctgatggagtgctgtcgaccggac
cacggctacacgcatgacagccgggccatccggttcctgttcgaggtgttgagcagcttc
gatgccgaacagcagcggctctttctccagtttgttactggaagcccgaggctgcctgtc
ggaggtttccgaagcctcaacccccctctgacaattgtgaggaagacgttcgagtcgacg
gagaaccccgacgacttcctgccctcagtcatgacctgcgtcaactacctgaagctgcct
gactactccagcatagagatcatgcgagaaaaactgttgattgctgcccgcgagggccag
cagtcgttccacctttcctga
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integrated database retrieval system
