Poecilia mexicana (shortfin molly): 106922732
Help
Entry
106922732 CDS
T08022
Symbol
lsm4
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm4
KO
K12623
U6 snRNA-associated Sm-like protein LSm4
Organism
pmei
Poecilia mexicana (shortfin molly)
Pathway
pmei03018
RNA degradation
pmei03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pmei00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
106922732 (lsm4)
09123 Folding, sorting and degradation
03018 RNA degradation
106922732 (lsm4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pmei03019
]
106922732 (lsm4)
03041 Spliceosome [BR:
pmei03041
]
106922732 (lsm4)
Messenger RNA biogenesis [BR:
pmei03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
106922732 (lsm4)
mRNA degradation factors
5'-3' decay
Lsm complex
106922732 (lsm4)
Spliceosome [BR:
pmei03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
106922732 (lsm4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
UNC119_bdg
Motif
Other DBs
NCBI-GeneID:
106922732
NCBI-ProteinID:
XP_014850879
LinkDB
All DBs
Position
Unknown
AA seq
216 aa
AA seq
DB search
RSLLYNYSTRYTESYFKQQKESELKAVEDARFSSRGQHYKIWSANIRRRRRSVGGKSRVI
HRRRQEIETNIIIMLPLSLLKTAQNHPMLVELKNGETYNGHLVSCDNWMNINLREVICTS
RDGDKFWRMPECYIRGSTIKYLRIPDEIIDMVKEEVVSKGRGRGGAQQNKQQGKGRGGPG
RGVFGARGRGMSGPGRGQQPPTDKKTGKAQGMKNQH
NT seq
651 nt
NT seq
+upstream
nt +downstream
nt
cggtctttgctgtacaactattcaacgagatacactgaaagctatttcaaacaacaaaaa
gaatctgaactcaaagccgttgaagatgcacgtttcagcagcagggggcagcactataag
atatggtccgctaacattaggaggcgaagaagaagtgtaggtgggaaaagccgtgttatt
catcgcaggagacaagaaatagaaacaaatataatcataatgcttcctttgtctctgttg
aaaactgcccagaaccatcccatgctggttgagcttaagaatggggaaacctacaacggc
cacctggtgagctgcgacaactggatgaacatcaacctgagagaagtcatctgcacatcc
agggatggagacaagttctggaggatgcctgagtgctacatccgaggaagcacgatcaag
tacctgcggatccccgatgagatcatcgacatggtgaaggaggaggtggtgtcgaagggg
cgcgggcgcggcggcgcccagcagaacaagcagcagggcaaaggaagaggaggacccggc
cgaggtgtgtttggcgcccgcggcagagggatgtccggtccggggcggggccagcagccg
ccgaccgataagaaaacaggcaaagctcaaggaatgaagaaccagcactga
DBGET
integrated database retrieval system
