Poecilia mexicana (shortfin molly): 106922813
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Entry
106922813 CDS
T08022
Name
(RefSeq) hypoxia-inducible factor 3-alpha-like isoform X1
KO
K08268
hypoxia-inducible factor 1 alpha
Organism
pmei
Poecilia mexicana (shortfin molly)
Pathway
pmei04137
Mitophagy - animal
pmei04140
Autophagy - animal
pmei04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
pmei00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
106922813
04137 Mitophagy - animal
106922813
04148 Efferocytosis
106922813
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pmei03000
]
106922813
Transcription factors [BR:
pmei03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
106922813
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
bHLH_HIF1A
PAS_11
PAS_3
PAS
HIF-1
PAS_9
PAS_4
Motif
Other DBs
NCBI-GeneID:
106922813
NCBI-ProteinID:
XP_014851004
Ensembl:
ENSPMEG00000000303
LinkDB
All DBs
Position
Unknown
AA seq
675 aa
AA seq
DB search
MEKEDGVVAVKRSSSEQRKLRSRDAARCRRSQETEVFYELARTLPLPRRVCTHLDKAGIM
RVTLSFLRMQQLLRPEQSVKKEEEEEEEEDPMDAFFPQALAGFVMVMTEEGDMVFLTENV
NKHIGITQLELIGQSVYDFIHPCDQEELRDLLTPRPGLSKKLMAEQPSERNFFLRMKSTL
TSRGRTVNIKSATWKVLHCTGHIRPFGSASPPAARVMTLLCEPIAHPSSVEFPLDSCTFL
TRHTMDLRFTHCEGRVTELVGYKPEDLIGRSAYEFYHALDSDRIKKSLLTLLSKGQVNTS
PYRFLANSGGFVWAETQATVLYNNKTSQPEAVVCLNFILSAVEQPDVVFSVEQTRRSLLP
KTEPSSPERTAEDSGISDTCDSDGEDAGSSAKLLLGLAEKPEELLQLADGGEPPLTAGGV
ELSFASPPSPDTVPDHPKDLCSPQLRQLLSPIFDGLNPSSSPAASSEPDLVTKPPHLTSE
CSGSGLTAGLRPAQSPCEDEAMDTSEVERFFTICPEETQLKEQAAEDVEGKELEMYAPYI
SMDDDFQLTFLSDLPQEADKPASLLLQGADGSPAVTVSRKRTHDLDKEPPPLLLIQDKRH
KPDPTSIEEELLLSHRLLGSLEDGDQSDLVLDSGRSQLLTDRDPVLSELCDTAALMRDIF
VPRPADLSPPLSPMT
NT seq
2028 nt
NT seq
+upstream
nt +downstream
nt
atggagaaggaagacggggtcgtggcggttaaacggagcagctcggagcagaggaagctc
cgctctcgcgatgcggcccgctgccggcgcagccaggagaccgaggtgttctacgaactg
gcccggaccctgccgctgccgcgccgagtctgcacccacctggacaaggccggcatcatg
agggtgacgctcagcttcctgcggatgcagcagctcctgcgacccgaacagagtgtgaag
aaggaggaggaggaggaggaggaagaggatccgatggacgccttctttccccaggcgttg
gcgggcttcgtcatggtgatgaccgaggagggggacatggtgttcctgacggagaacgtc
aacaagcacatcggcatcactcagctggagctgatcggccagagcgtctacgacttcatt
catccctgcgaccaggaggagctgcgagacctcctgactccgcgtccaggtctgagtaag
aagctgatggcggagcaaccgagcgagaggaacttcttcctgcgaatgaagagcaccctg
accagcagggggcgcaccgtcaacatcaaatctgccacctggaaggttctccactgcacg
ggccacatccgcccgtttggctcagcgtcgccccctgctgccagagtgatgacgctgctg
tgcgagccgatcgcccacccgtccagcgtggagttccctctggacagctgcaccttcctg
acgcgccacaccatggacctgcgcttcacccactgcgagggcagggtaacggagctggtg
gggtacaaaccggaggacctgattggacgctcggcctacgagttttatcacgcgctcgac
tcggatcgcatcaagaagagcctgctaacacttctgtccaaaggccaggtgaacacttcc
ccctaccgcttcctggccaacagcggcggcttcgtgtgggccgagactcaagccaccgtc
ctctacaacaacaagacgtcgcagcccgaagccgtcgtctgcctcaacttcatcctcagc
gcggtggagcagccggacgtggtgttctccgtcgagcagacccgccgcagcctcctgcct
aaaaccgagccgtcctccccggagcgcactgccgaggacagcggcatctccgacacctgc
gactcggacggcgaggacgccggcagctcggcgaagctcctcctggggctggcggagaaa
ccggaggagctgctgcagctggcggacggcggggagccgccgctgacggcaggtggggtg
gagctgtcgttcgccagtcctcccagtccagacacggttccggaccatcctaaggatctg
tgcagccctcagctgcggcagctgctgtcgcccatcttcgacggcctgaatccgtcctcg
tccccggccgcctcctctgagccggacctggtaaccaaacctcctcatttaaccagcgaa
tgttctggttctggtctaactgctggtctccgtccggcccagagcccctgtgaggacgag
gcgatggacaccagcgaggtggagcgcttcttcaccatctgcccggaggaaacgcagctc
aaggaacaagctgccgaggacgtggaggggaaggagctggagatgtacgcgccgtacatc
tccatggacgacgacttccagctcaccttcctcagcgacctgccgcaggaagccgacaaa
cccgcctcgctgctgctccagggcgccgatgggagtcctgccgtcaccgtcagcaggaag
aggactcacgacttggacaaagagccgccgcctctgctgctgatccaggacaagagacac
aaaccggacccgacctccatagaggaggagctgctgctcagccacaggctgctgggttcg
ctggaagacggcgatcagtcggatctggttctggactccggacgcagtcagctgctcaca
gacagagacccggttctgtcagaactgtgcgacaccgcagctctgatgagggacatcttc
gtccctcggccggctgatctgtcgccaccgctctcgcccatgacctga
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