Poecilia mexicana (shortfin molly): 106922881
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Entry
106922881 CDS
T08022
Symbol
polr2b
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB2 isoform X1
KO
K03010
DNA-directed RNA polymerase II subunit RPB2 [EC:
2.7.7.6
]
Organism
pmei
Poecilia mexicana (shortfin molly)
Pathway
pmei03020
RNA polymerase
pmei03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
pmei00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
106922881 (polr2b)
09124 Replication and repair
03420 Nucleotide excision repair
106922881 (polr2b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pmei03021
]
106922881 (polr2b)
03400 DNA repair and recombination proteins [BR:
pmei03400
]
106922881 (polr2b)
Enzymes [BR:
pmei01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
106922881 (polr2b)
Transcription machinery [BR:
pmei03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
106922881 (polr2b)
DNA repair and recombination proteins [BR:
pmei03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
106922881 (polr2b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_2
RNA_pol_Rpb2_7
RNA_pol_Rpb2_4
RNA_pol_Rpb2_3
RNA_pol_Rpb2_5
DUF5817
Motif
Other DBs
NCBI-GeneID:
106922881
NCBI-ProteinID:
XP_014851111
Ensembl:
ENSPMEG00000012625
UniProt:
A0A3B3X6Q8
LinkDB
All DBs
Position
Unknown
AA seq
1174 aa
AA seq
DB search
MYDQDEDNQYDEDDDEITPDLWQEACWIVISSYFDEKGLVRQQLDSFDEFIQMSVQRIVE
DAPPIDLQAEAQHTSGEVEEPPRYLLKFEQIYLSKPTHWERDGAPSPMMPNEARLRNLTY
SAPLYVDITKTIIKEGEEQLQTQHQKTFIGKIPIMLRSTYCLLSGLTDRDLCELNECPLD
PGGYFIINGSEKVLIAQEKMATNTVYVFAKKDSKYAYTGECRSCLENSSRPTSTIWVSMM
ARGGQGVKKSAIGQRIVSTLPYIRQEVPIIIVFRALGFVSDRDILEHIIYDFDDPEMMEM
VKPSLDEAFVIQEQNVALNFIGSRGAKPGVTKERRIKYAKEVLQKEMLPHVGVSDFCETK
KAYFLGYMVHRLLLAALGRRELDDRDHYGNKRLDLAGPLLAFLFRGMFKNLLKEIRIYAQ
KFIDRGKDFNLELAIKTRIISDGLKYSLATGNWGDVKKAHQARAGVSQVLNRLTFASTLS
HLRRVNSPIGRDGKLAKPRQLHNTLWGMVCPAETPEGHAVGLVKNLALMAYISVGSQPSP
ILEFLEEWSMENLEEISPAAIADATKIFVNGCWVGIHKDPEQLMNTLRKLRRQMDIIVSE
VSMIRDIREREIRIYTDAGRICRPLLIVEKQKLLLKRRHIDQLKEREYNNYSWQDLVASG
VVEYIDTLEEETVMLAMTPDDLQEKGVAYCSTYTHCEIHPSMILGVCASIIPFPDHNQSP
RNTYQSAMGKQAMGVYITNFHVRMDTLAHVLYYPQKPLVTTRSMEYLRFRELPAGINSIV
AIASYTGYNQEDSVIMNRSAVDRGFFRSVFYRSYKEQESKKGFDQEEIFEKPTRETCQGM
RHAIYDKLDDDGLIAPGVRVSGEDVIIGKTVTLPENEDELDSTNRRYTKRDCSTFLRTSE
TGIVDQVMVTLNQEGYKFCKIRVRSVRIPQIGDKFASRHGQKGTCGIQYRQEDMPFTCEG
ITPDIIINPHAIPSRMTVGHLIECLQGKVSANKGEIGDATPFNDAVNVQKVSNLLSEYGY
HLRGNEVLYNGFTGRKLTSQIFIGPTYYQRLKHMVDDKIHSRARGPVQILNRQPMEGRSR
DGGLRFGEMERDCQIAHGAAQFLRERLFEASDPYQVHVCNLCGLMAIANTRTHTYECRGC
RNKTQISLVRMPYACKLLFQELMSMSIAPRMMTS
NT seq
3525 nt
NT seq
+upstream
nt +downstream
nt
atgtacgaccaggacgaagataatcagtacgatgaagatgatgatgaaattactcctgat
ctgtggcaggaagcctgttggattgtcatcagctcttattttgacgagaagggcctggtg
cggcagcagctggactcgttcgatgagttcatccagatgtcggtccagcggatcgtggag
gacgctccgcccatcgacctgcaggccgaggcgcagcacacctcaggggaggtggaggag
ccgccacgctacctgctgaagttcgagcagatctacctgtccaagccgacccactgggag
cgggacggcgctccgtcccccatgatgcccaatgaggcccgcctccggaacctgacgtac
tctgcgccgctgtacgttgacatcactaagacgatcatcaaggagggggaggagcagctg
cagacgcagcatcagaagacattcatcggtaaaattcccatcatgctccgctccacctac
tgcctgctgagcggcctgaccgaccgcgacctgtgcgagctcaacgagtgtccgctggac
ccgggaggctacttcatcatcaacggctccgagaaggtgctgattgcgcaggagaagatg
gccaccaacacggtctacgtcttcgccaagaaggactcgaagtacgcgtacacgggtgaa
tgccggtcctgcctggagaactcgtcccggcccaccagcaccatctgggtgagcatgatg
gcccgtggaggacagggggtgaagaagagcgccatcgggcagcgcatcgtgtccacgctg
ccgtacatcagacaggaagtgcccatcatcattgtgtttcgggcgctgggcttcgtgtcc
gacagagacatcctggagcacatcatctacgacttcgatgacccggagatgatggagatg
gtgaagccgtcgctagacgaggcgtttgtgatccaggagcagaatgtggcactgaacttc
atcgggtccagaggcgccaagcccggcgtgacaaaggagcggcgcatcaagtacgccaag
gaagtcctgcagaaggagatgctgccgcacgtcggcgtcagcgacttctgcgagaccaag
aaggcctacttcctggggtacatggtccaccggctgctcctcgccgctctgggccggcgg
gagctggatgacagggatcactatggcaacaagaggctggacctggctggaccgctgctg
gccttcctgttcagggggatgttcaagaacctcctgaaagagatccggatctacgcccag
aagttcatcgaccgagggaaggactttaacctggagctagccatcaagacgcggatcatc
tccgacggactcaagtactccctggccaccggcaactggggcgacgtcaagaaggcccac
caggcccgcgccggcgtgtcccaggtgctgaaccggctcaccttcgcctccacgctgtcc
cacctgcgccgggtcaattcccccatcggccgcgacggcaagctggccaagccgaggcag
ctgcacaacacgctgtggggcatggtgtgccccgccgagacgcccgagggccacgccgtg
ggtctggtgaagaacctggccctcatggcctacatctcggttggctcgcagccgtctccc
atcctggagttcctggaggagtggagcatggagaacctggaggagatttccccggctgcc
attgccgatgctacgaagatcttcgtgaacggctgctgggtggggatccacaaagacccg
gagcagctgatgaacacgctgaggaagctccgcaggcagatggacatcatcgtgtcagag
gtgtcgatgatccgggacatccgggagcgggagatccggatctacacagatgccgggcgg
atctgccgaccgctgctgatcgtggagaagcagaagctgctgctgaagagacggcacatc
gaccagctgaaggagcgagagtacaacaactacagctggcaggacctggtggcgagcggc
gtggtggagtacatcgacaccctggaggaggaaaccgtcatgctcgccatgacccctgat
gacctccaggagaagggcgtggcctactgctccacctacacccactgtgagatccacccg
tccatgatcctgggagtctgcgcctcaatcatcccgttccccgaccacaaccagtctccc
aggaacacgtaccagtccgccatggggaagcaggccatgggcgtctacatcaccaacttc
cacgtgaggatggacacgctggcccacgtgctgtactacccccagaagccgctggtcacc
acgcgctccatggagtacctgcgcttccgggagctgccagcaggaatcaactccatcgtc
gccatcgcctcctacacgggctacaaccaggaggactcggtcatcatgaaccgctcggct
gtggaccgcggcttcttcaggtccgttttctaccggtcctacaaggagcaggagtccaag
aagggcttcgaccaggaggaaatctttgagaagccgacccgcgagacgtgtcaggggatg
agacacgccatctacgacaagctagacgacgacgggctgatcgcacccggcgtccgcgtg
tccggggaggacgtgatcatcgggaagacggtgacgctgccggagaacgaggacgagctg
gacagcaccaaccgccgctacaccaagagggactgcagcaccttcctgcgcaccagcgag
accggcatcgtggaccaggtcatggtgacgctcaaccaggagggatacaagttctgcaag
atccgggtccgttcagtccggatccctcagattggagacaagtttgccagccgccacggg
cagaagggaacctgtgggatccagtaccgacaggaggacatgccgttcacctgtgaaggc
atcacacctgacatcatcatcaaccctcacgccatcccgtccagaatgacagtcggccat
cttatcgagtgtctgcaggggaaggtgtcggccaacaaaggggagatcggcgacgccacg
ccgttcaacgacgccgtcaatgtgcagaaagtgtccaacctgctgtccgagtacggctac
cacctgagaggaaacgaggttctgtacaacggcttcacggggaggaagctgacgtcccag
atcttcatcggaccgacctactaccagcggctgaagcacatggtggacgataagatccac
tcccgggcccgcgggccggtccagatcctgaaccgccagccgatggagggccgctcccgt
gacggcgggctgcgtttcggggagatggagcgggactgccagatcgcccacggcgccgcc
cagttcctccgggagcggctgttcgaggcgtccgacccgtaccaggtccacgtctgcaac
ctgtgcggcctgatggccatcgccaacaccaggacgcacacctacgagtgtcggggctgc
cgcaacaagacgcagatctctctggtccggatgccatacgcctgcaagctgctgttccag
gaactgatgtccatgagcatcgctcctcgaatgatgacctcatag
DBGET
integrated database retrieval system
