Poecilia mexicana (shortfin molly): 106923644
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Entry
106923644 CDS
T08022
Name
(RefSeq) probable ATP-dependent RNA helicase DDX6
KO
K12614
ATP-dependent RNA helicase DDX6/DHH1 [EC:
5.6.2.7
]
Organism
pmei
Poecilia mexicana (shortfin molly)
Pathway
pmei03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pmei00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
106923644
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pmei03019
]
106923644
03036 Chromosome and associated proteins [BR:
pmei03036
]
106923644
Enzymes [BR:
pmei01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
106923644
Messenger RNA biogenesis [BR:
pmei03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
106923644
mRNA degradation factors
5'-3' decay
Decapping complex
106923644
Chromosome and associated proteins [BR:
pmei03036
]
Eukaryotic type
Gene silencing
piRNA pathway
106923644
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
CMS1
MS_TIM-barrel
NA-iREase2
Motif
Other DBs
NCBI-GeneID:
106923644
NCBI-ProteinID:
XP_014852347
Ensembl:
ENSPMEG00000023737
UniProt:
A0A3B3Y0B5
LinkDB
All DBs
Position
Unknown
AA seq
479 aa
AA seq
DB search
MATARTENLGPVVMGLNKQNGQLKGQTKPAAGPPASTQGKNPAGSNQDGGGIKFGDDWKK
CLQLPPKDNRVKTSDVTATKGNEFEDYCLKRELLMGIFEMGWEKPSPIQEESIPIALSGR
DILARAKNGTGKSGAYLIPLLERIDLKKDHIQAIVMVPTRELALQMSQICIQLSKHLGGV
KVMATTGGTNLRDDIMRLDETVHVVIATPGRILDLIKKGVAKVDRVQMMVMDEADKLLSQ
DFVVLIEDIISFLAKNRQILLYSATFPISVQKFMVKHLQKPYEINLMEELTLKGITQFYA
YVTERQKVHCLNTLFSRLQINQSIIFCNSTQRVELLAKKITQLGYSCFYIHAKMMQEYRN
RVFHDFRNGLCRNLVCTDLFTRGIDIQAVNVVINFDFPKNAETYLHRIGRSGRFGHLGLA
INLITSEDRFNLKAIEEQLVTDIKPIPSSIDKSLYVAEYHSGPVGDEDEEKPPRQQDST
NT seq
1440 nt
NT seq
+upstream
nt +downstream
nt
atggcaacagcccgaacggaaaacctcggtccggtcgtgatgggactgaataagcagaac
gggcagctcaaaggacagaccaaacctgctgcaggacccccagcatcaactcaaggaaag
aatccagctgggagcaaccaggacggcggaggaatcaagtttggagacgactggaagaaa
tgcctacagctccccccgaaggacaacagggtcaaaacctcagacgtcacggcaaccaag
ggcaacgagtttgaagattactgcctgaaaagggaactcctgatgggaatctttgagatg
ggctgggagaaaccgtcgccgatccaggaggagagcattcccatcgcgctgtccgggcgc
gacatcctggcacgagcgaaaaacgggacggggaaaagcggcgcctacctgatcccgctg
ctggagcggatagacctgaagaaggaccacatacaggccatcgtcatggtgcccacacgt
gagctggcgctgcagatgagccagatctgcatccagctcagcaaacatctgggcggagtc
aaagtgatggcgacgaccggaggaaccaacctgagggacgacatcatgcgcctggacgag
accgtgcatgtcgtcatcgccacgcccggccgcatcctggacttgataaagaaaggcgtg
gcgaaggtggaccgggtccagatgatggtgatggacgaggcggacaagctgctctctcag
gacttcgtggttctcatcgaggacatcatcagcttcctggccaagaaccggcagatcctg
ctctactccgcaaccttccccatcagcgtccagaagttcatggtgaagcacctgcagaaa
ccgtatgagatcaacctgatggaggagctgaccctgaagggcatcacccagttctacgcc
tatgtgacggagcgccagaaggtccactgcctcaacacgctcttctccaggctgcagatc
aaccagtccatcatcttctgtaactccacccagcgggtggagctgctggccaagaagatc
acgcagctgggatactcctgcttctacatccacgccaagatgatgcaggagtaccggaac
cgcgtgttccatgacttcaggaacgggctctgcaggaacctggtctgcaccgatctcttc
accagaggaatcgacatccaggctgtgaacgtcgtcatcaactttgatttccctaaaaat
gcagaaacgtacctccatcgcatcgggaggtcagggcggttcggccacctgggcctggcc
atcaacctgatcacctcggaggaccgcttcaacctgaaggccatcgaggagcagctggtg
accgacatcaagcccatccccagcagcatcgacaagagcctctacgtggccgagtaccac
tccgggcccgtcggcgacgaggacgaggagaagccgccgcgccagcaggacagcacctaa
DBGET
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