Poecilia mexicana (shortfin molly): 106923860
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Entry
106923860 CDS
T08022
Symbol
prpf40a
Name
(RefSeq) pre-mRNA-processing factor 40 homolog A
KO
K12821
pre-mRNA-processing factor 40
Organism
pmei
Poecilia mexicana (shortfin molly)
Pathway
pmei03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pmei00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
106923860 (prpf40a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pmei03041
]
106923860 (prpf40a)
Spliceosome [BR:
pmei03041
]
Complex A
U1 snRNP components
U1 related factors
106923860 (prpf40a)
Complex B
106923860 (prpf40a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FF
WW
WW_TCERG1
FF_RHG35_4th
Motif
Other DBs
NCBI-GeneID:
106923860
NCBI-ProteinID:
XP_014852689
Ensembl:
ENSPMEG00000022167
UniProt:
A0A3B3XVV1
LinkDB
All DBs
Position
Unknown
AA seq
883 aa
AA seq
DB search
MSSTETNNGPSQAAPYAAVPPAAIPPPYMGPPGIPPHFPPMGIPPMVQRPPSMTPMPPGI
MPPGIMPPMAAPPMGQMPSMIPPMIPGMMLPPRIPAATVQPTGPPGVDTTVPAAAAPGTT
SGTNGSPPEEQPKKKSVWTEHKSLDGKTYYYNTETKQSTWEKPDELKSPAEQMLSKCPWK
EYKSDTGKPYYYNSQTKESRWTKPKELEDLEAMIKAEESGTTEAAAPGTTAAPTAQADQN
TAAMVTVKEAETAAAVPEEQQSQVTSHQTAEVKAVEAPVTSSESAVVAESKPSVEVKEEE
RPELQKKTYKWNTKEEAKQAFKELLKEKGVSSNSSWEQAMKLIINDPRYSALPKLSEKKQ
AFNAYKVQTEKEEKEEARIKYKESKEKFQRFLENHEKMTSTTRYKKAEQMFNELEVWSCV
PERDRLEIYEDVLFYLAKKEKEQAKQLRKRNWEALKNILDNMANVTYRTTWSEAQQYLLD
NPTFAEDEELQNMDKEDALICFEEHIRALEKEEEEDKQKTLLRERRRQRKNRESFQKFLD
ELHDHGQLHSMSSWMEMYPTLSSDMRFSSMLGQPGSTPLDLFKFYVEDLKARYHDEKRII
KDILKDKGFLVEVNTSFDDFGSVISSDKRATTLDAGNIKLAFNSLLEKAEAREREREKEE
ARKMKRKEAAFKTMLKQATPPLEPEASWEEVRERFLKEAAFEDVTLESERKRIFKDFMHV
LEHECQHHHSKTKKHSKKSKKHHRKRSRSRSASESEEEEYHKKKKRSQSKSPSERSSSGE
SERSYKKSKKHKKKGKKRRHKSASPDSDGEKKGRERDGKRERDSEKDKENDKTRGKSRSE
SKQKSPKRKAAKEEGGWDTSGSELSEGELEKRRRTLLEQLDAP
NT seq
2652 nt
NT seq
+upstream
nt +downstream
nt
atgtcttcaacggagacaaataatggcccaagccaggcggcaccttatgcagctgtcccc
cctgctgccataccgcctccatatatgggaccaccaggaataccacctcacttcccaccc
atgggaataccccctatggtgcagcgacctcctagcatgactccaatgccacctggaata
atgccaccaggcataatgccaccaatggctgctccgccaatgggacagatgccaagcatg
ataccgcccatgatcccgggaatgatgctgcctcctcggattccagctgcgaccgtacag
ccgacgggaccccctggtgttgacaccacagtccctgcagcagctgcaccaggaacaact
agtggaacaaatggatcccctccagaagaacagccaaagaagaaatctgtgtggacagaa
cacaaatctttagatgggaaaacatattattacaatacagaaaccaaacagtccacatgg
gagaaaccggatgaactgaaatctcctgcagagcaaatgctgtctaaatgcccctggaag
gagtacaagtctgacacagggaagccttattattacaactctcagacaaaggagtccaga
tggaccaaacccaaggagctggaggatctggaggctatgatcaaagcagaggagagtgga
acaacagaggctgcggctcctggaacgactgcagctcctacagcgcaggccgatcaaaat
acagccgccatggtgaccgtaaaggaggcggaaactgcagcggcggtcccagaggaacag
cagtcccaggtgacatcgcatcaaacagctgaggtcaaggctgtggaggcacctgtgact
tcctcagagagcgccgtcgttgcagagagcaaacccagcgtcgaagtcaaagaagaagag
cgacctgaacttcagaagaaaacctataagtggaacacaaaagaagaagccaagcaggcc
ttcaaagagctgctgaaagagaagggtgtttcctcaaactcctcatgggaacaggccatg
aagctgattatcaatgaccctcgctacagtgctcttcccaaactgagcgagaagaagcag
gcgtttaatgcctacaaagtccaaaccgagaaggaggagaaggaagaggccaggattaaa
tacaaggagtccaaagaaaagttccagaggttcttggagaatcatgagaagatgacgtcc
accaccagatacaagaaagcagagcaaatgtttaatgagctggaagtgtggagctgcgtt
cctgagagagacagactggagatctacgaagacgtgttgttctacctggcgaagaaagag
aaggaacaagccaagcagctgaggaagaggaactgggaagctctgaagaacatcctggac
aatatggccaacgtgacatatcgcaccacctggtccgaggcccagcagtatctgctggac
aaccccacgtttgccgaggacgaagagctgcagaatatggataaagaggacgccctcatc
tgttttgaggagcacattcgagctctggagaaggaggaggaagaagacaagcagaagact
ctcctcagggaacggagacggcagcgcaagaacagagagtccttccagaaatttctggat
gagctccatgatcacggccagcttcactccatgtcctcgtggatggagatgtacccgacc
ctgagctctgacatgcgcttcagcagcatgctgggccagcctggttccactcctttggac
ctcttcaaattctacgtggaagacctgaaagcccgttaccacgatgaaaaacgaataatc
aaagatatcctcaaggataaaggcttcctggtggaagtgaacaccagctttgatgacttt
ggatccgttatcagctcagacaagagagccactactctggatgctgggaacataaagctg
gccttcaacagtttactggagaaggctgaagccagagagcgagagcgagagaaggaggag
gcccgcaagatgaagcggaaagaagcagctttcaaaaccatgttgaagcaggccacgccg
ccgctggagccagaggcctcatgggaggaagtcagagaaagattcctgaaagaagctgcc
ttcgaagacgtgacgctggagtcagagaggaagaggatattcaaagatttcatgcatgtt
ctggagcatgaatgccagcatcaccattccaagacaaaaaagcattcaaagaagtccaag
aagcaccacaggaagcgatcacgctctcgatcagcgtcagagtcagaggaggaggagtac
cacaagaagaagaagcgctcccagtccaaatctccctccgagcgttcttctagtggagag
tctgagcgaagctataaaaaatccaagaagcacaagaagaaaggcaagaagaggcgccac
aagtctgcctcaccggactctgacggcgagaagaaaggaagagagcgcgatgggaaacgg
gagcgagattcagagaaggataaagagaacgacaagactcgggggaaatctcgctcagag
tctaaacagaaatctcctaaaaggaaagcagccaaagaggagggtggctgggacacgtca
ggcagtgagctgagtgaaggagagctggagaagagaagaagaactttactggaacagctg
gatgcaccttga
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