Poecilia mexicana (shortfin molly): 106924056
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Entry
106924056 CDS
T08022
Name
(RefSeq) C-myc promoter-binding protein-like isoform X1
KO
K20163
DENN domain-containing protein 4
Organism
pmei
Poecilia mexicana (shortfin molly)
Brite
KEGG Orthology (KO) [BR:
pmei00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pmei04131
]
106924056
Membrane trafficking [BR:
pmei04131
]
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
106924056
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DENN
dDENN
uDENN
PPR_2
PPR_3
DUF2464
PPR_long
PPR
Motif
Other DBs
NCBI-GeneID:
106924056
NCBI-ProteinID:
XP_014853035
Ensembl:
ENSPMEG00000014779
LinkDB
All DBs
Position
Unknown
AA seq
1974 aa
AA seq
DB search
MMEDKGPRVADYFVVAGLTDPSKPLDQEIHFDDVCHKTAKPKAPITDVAVVIRSLGEEVP
PGFVCIETTPSGHSADLNNGGLMAPQIFLCYRRGRDKPPLIDLGVLYEWKERLKQGCHLI
QTTPAGRPANISGNSSQRIYVTYRRAPDSQPHASLAVTDICIIIPSKGEAPPHTFCKVEK
NLNSSMWGSSVYLCYKKSVAKTNVIAYKAGLFSRYPEEDYESFPLPESVPLFCLPMGATI
ESWPANTKYSLPVFSTFVLTGASGEKVYGAAIQFYEPYPQECLTDTQLSQLGLLSPEQCN
ASPSSSAANAAINPGNGAASASSVYTNKCICLLSHWPFFDAFRKFLTFLYRYSISGPHAL
PIEKHISHFMHKVPFPSSQRPRILVQLSPHDSLMLSQPVSSPLPLSGGRFSTLLHNLGPE
NAVTLLVFAVTEHKILVHSLRPAVLTSVTEALVSMIFPFHWPCPYIPLCPLALADVLSAP
CPFIVGVDSRYFDLYDPPPDVNCVDLDTNTIFHNDDKRALTWKILPKKACKNLMNVLSNL
HQQLVDGQYRSDGLLELSMSDTQELSCGKSLHMLELEIQEAFLRFMAAILKGYRSFLRPI
TQAPSEKATDASSLFDLQGFLKSRDRSHQKFYSLMTKTQMFIRFIEECSFVSDKDTSLAF
FDDCVDKLFNSERSAEKGGKVDGERPDETRLIEIDESQRSEHTVFITPPELPPLPDGEEY
PLCYRYDGFPVLTLELFDPVEGLWTPSSRLAARHSCPTSPAPMFRRTKQEIKSAQKIAKK
YSSIPQLWSKCLLRHCYGLWFICLPAYVKVCHSKVRALRTAYDVLRKMQAKKLQPPDEVC
YRVLMQLCGQYGQPVLAVRVLFEMKKAGVHPNAITYGYYNKAVLESTWPSSTRGGYFLWM
KLRNVILGVAQFKRALRRHGPPLTQSPLSDGSDLDAVSHGSLDSSADPNPAEQSPVEPSD
DRSSTVGGGGDSAGARPVAARSPWVGAELREATLHPGDQSDLGYNSLSKEEVRRGDAAPP
DKDEKKESDCSSLSETESVKGSKDCLPQLDLEAGSSFKPRGIVRSSYPYGDSARKPRSST
SAGHIAGLLFTTSLDEIGEVRANSLLRRHRSALEEVVGSSGSGAALDWQAARARRVSGDT
TGSGGSGATVLGLGMSQAETDPDKIAGLLGADAKILSGTNYSQKLHLGGFNHKEEEEQSY
SDEDKSNTEAIFDFEDLDLEKPSLGVRRLKKPVERSASYGGMSSAAPRGAVMRTGIETGF
DPLSLMAAESQSATYPDGDEARAPGARRNLAREIELYMSHLDTPLSSRTSSSELQGPASP
LLLHPHAAAAAFRRSSLPHAAPLRTSAVPRSRTFHQASPARPASRQRLMSSPSGRSSSTS
PSLSPFRERLASPTSSAFALDALLTPTLDVFKTSVVSAGKGVAERASRWYSRFATSNTPT
KDGFSDRLSVSSLSVGDPDGSIQDEAEFEETEQLGVSPQKNGPSCPHRSPVHSRVDSPTA
GRSLGRPTSLPPGCPLSLPGFSLPDKSDLGSSRCTSNTSIFNNYAMELLISSCSRCKTCD
CLVYDEEIMAGWTADDSNLNTTCPFCGNPFLPFLNVEIRDMRGPGRLFLKGSPSMDDAMT
SSYSASTGLDTGTSTLSTPCPTTAVFPPSPTAAAKETPGRTRPSRAQGINIPTDRRQGAL
SSGGPMTRSVSAFGPMEEESQLSHHLPTSGSLPSHLNEAADPLSMDWQLHNPEPVTVPYL
SPLVLWKELESLLENEGDPVIAEADMVDHHPIIYWNLLWYFRRLDLPSNLPGLILTSEHC
NRDSQVPRHWMSEDSKHVLIQILWDNLKLHQDPVQPLYILWNTYRLNCTLLLENVGYPLS
RPVPDEEKPLTDELLQGVVRSIQRNDVGRPMAQLLQLLDRMLGVKRQRSLYRDILFLSLV
ALGKDNIDIDAFDREYKLAYDRLLPPLVRLTHNCDRPPGAGVMECRRTFGEPYL
NT seq
5925 nt
NT seq
+upstream
nt +downstream
nt
atgatggaggacaaaggcccccgtgtagccgactacttcgtggttgccggtctgacggac
ccgtccaagccgttggaccaggagatccactttgatgacgtgtgccacaagacggccaag
cccaaagcgcccatcacggacgtggcggtggtgatccgctccctgggcgaggaggttcct
ccggggttcgtgtgcatcgagaccacgccgagcggacactcggccgatctgaacaacggc
ggcctcatggcgccgcagatcttcctgtgctacaggcgaggccgcgacaaaccgccgctc
atcgacctgggagtcctgtatgagtggaaggagaggctgaagcagggctgccacctcatc
cagaccacgcccgctggtcgtcccgccaacatcagcggcaactcctcccagcggatctac
gtcacgtaccgccgagcgccggacagccagccgcacgcctccctggccgtcaccgacatc
tgcatcatcatcccgagcaaaggcgaggcgccgccgcacaccttctgcaaggtggagaag
aatctcaacagcagcatgtggggctcctccgtttacctgtgttacaagaaatctgtggcc
aaaaccaacgtgatcgcctacaaagcaggtttattcagcagatatccggaggaggactac
gagtctttccctctgccggagtcggtccctctcttctgccttcccatgggggcaacaatc
gaaagctggccagcaaacaccaagtactccctccctgttttctccaccttcgtcctcacc
ggcgcgtctggagagaaggtttacggtgctgccatccagttttatgagccctacccacag
gagtgcctgactgatacgcagctctcccagctgggccttctgagcccagaacaatgcaac
gcctctccgtccagctctgcagcgaatgccgccatcaatcctggaaacggcgctgccagc
gccagctcagtctacaccaacaaatgcatctgcctgctgtcccactggcccttctttgac
gctttccgcaagttcctcacattcctctatcgatactccatctccggcccgcacgcgctg
cccatcgagaaacatatctctcacttcatgcacaaagttcccttcccgtcctcccagagg
cctcgcatcctggtgcagctttctcctcatgacagcctgatgttgagccagcctgtcagt
tctcccttaccgctcagcggaggaaggttttccactctgctccataacctcggtccggag
aacgccgtcaccttgctggtgttcgccgtcaccgaacataaaatcctggtccattcttta
cggccggcggtgctgaccagcgtcacagaggcgctggtgtcaatgatcttccccttccac
tggccgtgtccctacatcccgctctgccccctggcgctggccgacgtgttgagcgctccc
tgtccgtttatcgtcggcgtcgactcccggtactttgacctctacgaccctccgcctgac
gtgaactgtgtggacctggacacaaacaccatcttccacaacgatgataaacgcgctctc
acatggaagatcctgccaaagaaagcgtgtaaaaacctgatgaatgtgctgagtaatctg
caccagcagctggtcgacggtcagtaccgctccgacgggctgctggagctcagcatgagc
gacacacaagagctgagctgtgggaagagcctccacatgctggagctggagatccaggaa
gccttcctgcgcttcatggcggccattttaaagggttaccgctccttcctgcgccccatc
acacaggcgccgtcggagaaggccacggacgccagctcgctcttcgacttacaaggattc
ttgaagagccgcgaccgctctcaccagaagttttactcgctcatgaccaagacccagatg
ttcatccgcttcatcgaggaatgctcgttcgtcagcgacaaagacaccagcctggcgttc
tttgacgactgcgttgacaaacttttcaactcagagcggagcgcagagaaaggagggaag
gtggacggcgagcggccggacgagacgcggctgatcgagatcgatgagtcgcagcgcagc
gagcacacggtgttcatcactcctccagagctgccgccgctgcctgacggggaggagtac
ccgctctgctacaggtatgacggtttcccggtgttaactctggagctgtttgacccggtg
gagggactgtggacgccctcctcccgcctcgctgccaggcacagctgccccacaagcccc
gcccccatgttcagacgcaccaaacaggagattaaatcagcgcagaagatcgccaagaag
tattcgtccatcccccagctgtggtccaagtgcctgctgcgccactgctacggcctgtgg
ttcatctgcctgccggcgtacgtcaaggtgtgccactccaaggtgcgggcgctgcgcacc
gcctacgacgtcctcaggaagatgcaggcgaagaagctgcagccgcccgacgaggtgtgc
taccgggtcctgatgcagctgtgtgggcagtacggccagccggtcctggcggtcagagtc
ctgtttgagatgaagaaggccggcgttcaccccaacgccatcacctacggatactacaac
aaggcggtgctggagagcacgtggccctctagcaccagaggaggatacttcctatggatg
aagctgaggaacgtgattctgggcgtggctcagttcaagcgagctctgcgccgacacgga
ccgccgctcacccagagcccgctgtcagatggcagcgacctggacgctgtgagtcacggc
agtctggacagctctgctgacccgaacccggccgagcagagcccagtagaaccctctgac
gatagatctagcacagtgggcggcgggggcgacagcgcgggggccaggcccgtggcggcc
cgctctccctgggtgggcgctgagctcagagaagccactctccacccaggagatcagtca
gatttgggttacaactctctgtcgaaggaggaagttcggagaggcgacgccgctcccccc
gacaaagacgagaagaaggagagcgactgcagctccttgtcggagactgaaagcgtgaag
ggcagcaaggactgcctgcctcagctggacctggaggccggctcctccttcaagcctcgg
ggaatcgttcggagcagctatccgtacggggattctgcccggaaacccaggagctccacc
agcgcaggccacatcgctggcctcctcttcaccacgtctctggatgagatcggtgaggtt
cgtgccaacagcctgctgcggcgacaccgcagcgccctggaggaggtggtgggcagctcc
ggcagcggcgccgctctagactggcaggcggcgcgggcccgccgcgtgagcggtgacacg
acgggcagcggcggcagcggcgccaccgtcctcggcctcggcatgagtcaggcggagacc
gaccctgataagatcgccggactgctgggcgccgacgccaagatcctgtccggtaccaac
tacagccagaagcttcacttaggaggctttaatcacaaagaggaagaggaacaaagctac
agtgatgaagataagagtaacacggaagccatttttgattttgaggatctggacctggag
aagccgtctctcggggtcagacgtcttaaaaagcccgttgagcgcagcgccagctacggt
ggcatgagctcggcggcacccagaggagctgtgatgcgtaccggcatcgaaacgggcttc
gacccgctctccctgatggccgccgagtcgcagagcgccacgtacccggatggtgacgag
gccagagcgccgggtgcccgccgtaatctggcccgggagatcgagctgtacatgagccac
ctggacacgccgctgagcagccgcacgtccagctccgagctgcagggcccggccagcccg
ctgctgctccacccccacgccgccgccgccgccttccggaggtccagcttgccccacgcc
gctccactcaggaccagcgcagtgccgcgctcacgcaccttccaccaggcgtcgccggcc
cggcccgcgtcccgccagcggctgatgtcgtcgccgtcgggccgcagctccagcaccagc
cccagcctgagccccttcagggagcgcctggcctcgccgacctcctccgccttcgccctg
gacgccctgctcaccccgacgctcgacgtcttcaagaccagcgtggtttctgctgggaag
ggcgtggcggagcgggccagccgctggtactcgcgtttcgccacgtccaacacgccaacc
aaggacggcttcagcgaccgtctgagcgtttcctccctcagtgtcggggatccagacggc
tccatccaggacgaagcggagtttgaggagacagagcagctcggcgtctcccctcagaag
aacggtccctcctgtccccacaggagtcccgtccacagccgggtggacagtcccactgca
ggacgcagcctgggcagacccacgtctcttcctcctggttgtcctctgtctctgcccggg
ttctcgctgccggacaagtccgacctcggatcgtcacgctgcaccagcaacaccagcatc
ttcaacaactacgctatggagctgctgatctccagctgctctcgctgtaaaacctgcgac
tgcctggtttacgacgaggagatcatggctggatggacggctgacgactccaacctcaac
accacctgccccttctgcggaaaccccttcctgccgttcctcaacgtggagatccgggac
atgagaggacccgggaggctcttcctgaagggcagcccgtccatggatgacgccatgacc
tcatcgtactccgcctccacgggtctggacacggggacgtccacgttgtccacgccgtgt
cccaccacagccgtgttccctccctcacccacagcagccgcaaaggaaactcctgggagg
actcggcccagcagggctcaaggcatcaacatccccacagatcgccgccagggggcgctg
tcctccggcggacccatgacccgcagcgtcagcgccttcggccccatggaggaagagtcc
cagctcagccaccacctgccgacgtccggcagcctgccgagccatctgaacgaagccgcg
gaccccctcagcatggactggcagctccacaacccggagcccgtgacggtgccgtacctg
agcccgctggttctgtggaaggagctggagagtctgctggagaacgagggcgacccggtg
atcgccgaggccgacatggtggaccaccaccccatcatctactggaacctgctgtggtac
ttccggcggctggacctgcccagcaacctgccgggcctcatcctcacctctgagcactgc
aacagagactcccaggtccctcgtcactggatgtccgaggacagcaaacatgttctgatc
cagatcctatgggacaacctgaagctgcaccaggacccggtccagcctctctacatcctc
tggaacacatacaggcttaattgcactctgttgttagagaatgtgggctaccctctgtcc
cggccggtcccggatgaggagaagcctctgacggacgagctgctgcagggcgtggtgcgc
agcatccagaggaacgacgtcggccggccgatggcgcagctgctgcagctgctggaccgg
atgctgggggtcaaacgccaaaggagtttgtacagagacatcctcttcctgtccctggtg
gcgctgggaaaagacaacatcgatatcgacgccttcgatcgtgagtacaagctggcgtac
gaccgcctgctgcccccgctggtcaggctgacccataactgtgaccgtcctccgggcgcc
ggcgtcatggagtgccgccggacgttcggagagccttacctgtga
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