Poecilia mexicana (shortfin molly): 106924133
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Entry
106924133 CDS
T08022
Symbol
ndc1
Name
(RefSeq) nucleoporin NDC1 isoform X1
KO
K14315
nucleoporin NDC1
Organism
pmei
Poecilia mexicana (shortfin molly)
Pathway
pmei03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
pmei00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
106924133 (ndc1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pmei03019
]
106924133 (ndc1)
Messenger RNA biogenesis [BR:
pmei03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
106924133 (ndc1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ndc1_Nup
Motif
Other DBs
NCBI-GeneID:
106924133
NCBI-ProteinID:
XP_014853173
Ensembl:
ENSPMEG00000012731
UniProt:
A0A3B3X6U8
LinkDB
All DBs
Position
Unknown
AA seq
669 aa
AA seq
DB search
MFPSETSCWFIRKVIWWRAAASIAWSVLLLPPTTAVFVFLSKFSFLHPIQTISECLSLLM
SSCLIFSFILLGGVVTMVGFLNLEYYTVIPTIACSKIALLGQLLHPRQVINSFAHCLMGV
IVGWCCAVTAGSRYETLGCPCKSSDGVPQMGLNEYHLVFLLAGAFVGFSHSLLGVIHNIN
YVSFNAVQQYKYLHFKGSLPLVLKCSAIQAFYSIRNFTVAYFFLGYIPKTWICKTLNLHL
DSSVHRLDSITGFVDLSLLYHLWISATFLLFTWYTTLLLFRIFVTEVYSFPVQPTFTEDS
RQCLPRVLTDQQPMILKFLALQDLALLSKHSPSRRSEVFSLSQPGGHPHNWNAVSRECLA
LLADLTQRLVAYHETVATNGRAKSLSSGSERKTSSDTSFSSGTEDLMSPRPTFLTKTPTS
VFARSFAGGPHSPLTAPFTPDLDSPFSSPTLRRLTGPVDQCSPWHGSVQSPHIMRRAPKL
WSTSAESQVSSSPPRSPASVPSPKHEPTKPSFLAQFLQNRKEQVKNFMAKRVLIMYLFNK
LPEASSQALFADSQAHIWALEALSYLVQASFTEDQFGVVQTTLPSILSSMLHLQEAVDRH
FKLPHASSKPVRSANSMEDFTYKTLRFALRATLKTAIYRITTTFGSHLNAVQMSAEHRKR
LQQFLEFKE
NT seq
2010 nt
NT seq
+upstream
nt +downstream
nt
atgtttccttcagaaacaagctgctggtttatccgcaaggttatttggtggagagctgct
gccagcattgcctggtctgtcctgttgttgccgcccaccacagcagtttttgtgtttctc
agcaagtttagttttctgcaccccattcagactatttcagaatgcctgtctctgctgatg
agttcctgtttgattttctccttcatcctgcttggtggagtggttaccatggttgggttc
ttgaatttagagtactatacagttatcccaactattgcctgctctaaaatcgctttgctg
ggtcagctgcttcaccctcgccaggttatcaactcctttgcccactgcctgatgggagtg
attgtaggttggtgttgtgcagtcactgctggtagcagatatgagacactcgggtgcccg
tgtaaaagtagcgatggagttcctcagatggggctcaatgagtaccacctggtctttttg
ctggcgggagcatttgtcggcttctctcacagcctcctgggagttatccataacataaat
tatgtctccttcaatgccgttcagcaatacaaatatctccacttcaaagggtccctgccc
ttagtgctgaagtgcagcgccattcaagcattttactctatcaggaacttcactgttgct
tatttctttctgggttatatcccaaaaacatggatctgcaaaactctgaatcttcatttg
gacagctctgtccatcgtctggacagcataactggatttgtggacctgtccctcctctac
cacctctggatcagcgccaccttcctcctcttcacctggtacaccacattgctgctcttt
aggatctttgtcacagaggtgtacagttttcctgtgcaaccaacttttactgaagattcc
cgccagtgtcttcccagagttctcactgaccaacaaccaatgatcttgaagttcctagcc
ctgcaggacttggctctgctgtccaaacattctccatccaggcgcagtgaagtcttcagt
ctcagccagccaggcgggcatcctcataactggaacgctgtcagtagagagtgtctggct
ctgctggccgatctgacgcagagacttgtggcttatcatgaaaccgtagcaaccaacggg
agggccaaatctctgtccagtggcagtgaaaggaagacttcatctgacacatcattttcc
tctggtacagaagacctgatgagtccaagaccaactttcctaaccaagactcccacttcg
gttttcgcccgctcttttgccggaggtccacacagccctctgacggcaccgttcacgccc
gacctggacagccccttttcctcccccaccttgcggcggctcaccggtccggtggatcag
tgctcgccatggcacggctcagtgcagagcccgcacatcatgaggcgggcgcccaaactc
tggtccacctccgcagagtcacaggtcagcagcagcccaccacgctctccagcctcggtt
cccagccccaaacatgaacccaccaagccaagtttcctggcccagttccttcaaaacaga
aaagaacaggttaaaaatttcatggcaaagcgggtgctgataatgtatttgtttaacaag
cttccggaagcctctagtcaggccctcttcgccgacagccaggctcacatctgggcgtta
gaagcgctgtcatacctggttcaggcctccttcacagaggaccagtttggggttgttcag
actacattacccagcattctcagctccatgctccacttacaagaggctgtggatcgacac
tttaagctgcctcatgcttccagtaagccggtcaggtccgccaacagcatggaggacttt
acctacaaaacactgcgctttgctctcagagccacgctcaagactgccatttacaggata
accaccaccttcggaagtcatttaaacgctgtccagatgtctgcagagcaccgaaaaaga
ctgcagcagtttctggagttcaaagaataa
DBGET
integrated database retrieval system