KEGG   Poecilia mexicana (shortfin molly): 106924133
Entry
106924133         CDS       T08022                                 
Symbol
ndc1
Name
(RefSeq) nucleoporin NDC1 isoform X1
  KO
K14315  nucleoporin NDC1
Organism
pmei  Poecilia mexicana (shortfin molly)
Pathway
pmei03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:pmei00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    106924133 (ndc1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pmei03019]
    106924133 (ndc1)
Messenger RNA biogenesis [BR:pmei03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     106924133 (ndc1)
SSDB
Motif
Pfam: Ndc1_Nup
Other DBs
NCBI-GeneID: 106924133
NCBI-ProteinID: XP_014853173
Ensembl: ENSPMEG00000012731
UniProt: A0A3B3X6U8
LinkDB
Position
Unknown
AA seq 669 aa
MFPSETSCWFIRKVIWWRAAASIAWSVLLLPPTTAVFVFLSKFSFLHPIQTISECLSLLM
SSCLIFSFILLGGVVTMVGFLNLEYYTVIPTIACSKIALLGQLLHPRQVINSFAHCLMGV
IVGWCCAVTAGSRYETLGCPCKSSDGVPQMGLNEYHLVFLLAGAFVGFSHSLLGVIHNIN
YVSFNAVQQYKYLHFKGSLPLVLKCSAIQAFYSIRNFTVAYFFLGYIPKTWICKTLNLHL
DSSVHRLDSITGFVDLSLLYHLWISATFLLFTWYTTLLLFRIFVTEVYSFPVQPTFTEDS
RQCLPRVLTDQQPMILKFLALQDLALLSKHSPSRRSEVFSLSQPGGHPHNWNAVSRECLA
LLADLTQRLVAYHETVATNGRAKSLSSGSERKTSSDTSFSSGTEDLMSPRPTFLTKTPTS
VFARSFAGGPHSPLTAPFTPDLDSPFSSPTLRRLTGPVDQCSPWHGSVQSPHIMRRAPKL
WSTSAESQVSSSPPRSPASVPSPKHEPTKPSFLAQFLQNRKEQVKNFMAKRVLIMYLFNK
LPEASSQALFADSQAHIWALEALSYLVQASFTEDQFGVVQTTLPSILSSMLHLQEAVDRH
FKLPHASSKPVRSANSMEDFTYKTLRFALRATLKTAIYRITTTFGSHLNAVQMSAEHRKR
LQQFLEFKE
NT seq 2010 nt   +upstreamnt  +downstreamnt
atgtttccttcagaaacaagctgctggtttatccgcaaggttatttggtggagagctgct
gccagcattgcctggtctgtcctgttgttgccgcccaccacagcagtttttgtgtttctc
agcaagtttagttttctgcaccccattcagactatttcagaatgcctgtctctgctgatg
agttcctgtttgattttctccttcatcctgcttggtggagtggttaccatggttgggttc
ttgaatttagagtactatacagttatcccaactattgcctgctctaaaatcgctttgctg
ggtcagctgcttcaccctcgccaggttatcaactcctttgcccactgcctgatgggagtg
attgtaggttggtgttgtgcagtcactgctggtagcagatatgagacactcgggtgcccg
tgtaaaagtagcgatggagttcctcagatggggctcaatgagtaccacctggtctttttg
ctggcgggagcatttgtcggcttctctcacagcctcctgggagttatccataacataaat
tatgtctccttcaatgccgttcagcaatacaaatatctccacttcaaagggtccctgccc
ttagtgctgaagtgcagcgccattcaagcattttactctatcaggaacttcactgttgct
tatttctttctgggttatatcccaaaaacatggatctgcaaaactctgaatcttcatttg
gacagctctgtccatcgtctggacagcataactggatttgtggacctgtccctcctctac
cacctctggatcagcgccaccttcctcctcttcacctggtacaccacattgctgctcttt
aggatctttgtcacagaggtgtacagttttcctgtgcaaccaacttttactgaagattcc
cgccagtgtcttcccagagttctcactgaccaacaaccaatgatcttgaagttcctagcc
ctgcaggacttggctctgctgtccaaacattctccatccaggcgcagtgaagtcttcagt
ctcagccagccaggcgggcatcctcataactggaacgctgtcagtagagagtgtctggct
ctgctggccgatctgacgcagagacttgtggcttatcatgaaaccgtagcaaccaacggg
agggccaaatctctgtccagtggcagtgaaaggaagacttcatctgacacatcattttcc
tctggtacagaagacctgatgagtccaagaccaactttcctaaccaagactcccacttcg
gttttcgcccgctcttttgccggaggtccacacagccctctgacggcaccgttcacgccc
gacctggacagccccttttcctcccccaccttgcggcggctcaccggtccggtggatcag
tgctcgccatggcacggctcagtgcagagcccgcacatcatgaggcgggcgcccaaactc
tggtccacctccgcagagtcacaggtcagcagcagcccaccacgctctccagcctcggtt
cccagccccaaacatgaacccaccaagccaagtttcctggcccagttccttcaaaacaga
aaagaacaggttaaaaatttcatggcaaagcgggtgctgataatgtatttgtttaacaag
cttccggaagcctctagtcaggccctcttcgccgacagccaggctcacatctgggcgtta
gaagcgctgtcatacctggttcaggcctccttcacagaggaccagtttggggttgttcag
actacattacccagcattctcagctccatgctccacttacaagaggctgtggatcgacac
tttaagctgcctcatgcttccagtaagccggtcaggtccgccaacagcatggaggacttt
acctacaaaacactgcgctttgctctcagagccacgctcaagactgccatttacaggata
accaccaccttcggaagtcatttaaacgctgtccagatgtctgcagagcaccgaaaaaga
ctgcagcagtttctggagttcaaagaataa

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