Poecilia mexicana (shortfin molly): 106924241
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Entry
106924241 CDS
T08022
Symbol
ddx54
Name
(RefSeq) ATP-dependent RNA helicase DDX54 isoform X1
KO
K14808
ATP-dependent RNA helicase DDX54/DBP10 [EC:
5.6.2.7
]
Organism
pmei
Poecilia mexicana (shortfin molly)
Brite
KEGG Orthology (KO) [BR:
pmei00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pmei03009
]
106924241 (ddx54)
Enzymes [BR:
pmei01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
106924241 (ddx54)
Ribosome biogenesis [BR:
pmei03009
]
Eukaryotic type
Pre-60S particles
Helicases
106924241 (ddx54)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
DBP10CT
ResIII
DNA_pol3_chi
Motif
Other DBs
NCBI-GeneID:
106924241
NCBI-ProteinID:
XP_014853314
Ensembl:
ENSPMEG00000010803
LinkDB
All DBs
Position
Unknown
AA seq
861 aa
AA seq
DB search
MAQRKKKLTKKKRHTPNREQEVDSDSGDFQLAAEIKDDDTPGRKLPRFPATSDCTSDVEP
DTRELVRAQNKKKKKSGGFQSMGLSFPVYKGVMKKGYKVPTPIQRKTIPVILDGKDVVAM
ARTGSGKTAAFLVPMFEKLKAPQAQTGARALILTPTRELALQTMKFTKELGKFTRLKIAL
ILGGDSMDEQFAALHENPDIIIGTPGRLMHVITDMNLKLHSVEYVVFDEADRLFEMGFAD
QLQEIIRRLPDTRQTLLFSATLPKLLVEFARAGLTEPVLIRLDVDTKLSDQIKLSFFHLR
VDDKPALLLHLLRNVAKPQEQTVVFAATKHHVEYLNELLSSEGIECAYIYSALDQTARKI
NIGKFVHRKAMVLIVTDVAARGIDIPLLDNVINYNFPSKAKLFLHRVGRVGRAGRSGTAY
SMVCPDEMPYVYDLHLFLGRPVQFATADRTQDSDGVFGRVPQSILDDEGSHLITAHENSL
DLQNLHRVSENAYKQYLKSRPNPSAESIRRVKSTDVSIMAVHPLLGSGLEKNELERLQLV
DAIKSYKSKSTIFEINSNSKTPASEVMRKKRSKDKQVVDKFNRQREDVAAGSRLQLSAPP
RATAGENEGQGKGNEEEDLQGVFSEVLGFKRRNLQEDGEHPKSKKSRETGKDEEYYIPYK
PKDFNSERGLSLGGEGSHFEQQASSAVLDLMGDEGDQLNQHKKIMRWDRKRKRFVKESGK
EEQNKKIRTESGQIVHNKKRKNFYEEWKKKYRVEDAGPGSDGETGGRKRSAGGMRRGRGR
RGASSHRPAAPQVTAGGRRIRSELKSSSQILKNRKLKQKQQFLQGGGMKRIRSKNKQWLG
EMKKSGFGRGGQKKGKMRKRL
NT seq
2586 nt
NT seq
+upstream
nt +downstream
nt
atggctcagagaaagaagaagctgacgaagaaaaaaagacatacgcctaacagggagcag
gaggttgactctgatagtggagattttcagctggctgctgaaattaaagacgatgatact
ccagggaggaaactgccacgcttccctgcgacgtcagactgcacatccgacgtggagccc
gacaccagggaactcgtccgagcccaaaacaagaagaagaagaagtctggggggtttcag
tccatgggtctcagctttcctgtttataagggtgtcatgaagaagggttacaaagtccct
actccaattcagaggaagaccattcctgtgattctggacgggaaggacgtggttgccatg
gcgaggacgggcagcgggaagacggctgcttttctggtacccatgtttgagaaactgaag
gcccctcaagcccagacaggagcccgagctctcatcctgacccccaccagagaattggcc
ctccagaccatgaagttcacaaaagagctgggtaaattcacacgcctgaagattgcttta
attcttggtggagacagcatggacgaacagttcgccgcgcttcacgaaaacccagacata
attatcggcacccctggtcgtctcatgcacgtcatcacagacatgaacctgaagctgcac
agtgtggagtatgtggtgtttgatgaggccgacaggctgtttgaaatgggttttgccgat
cagcttcaggagatcatccgcaggcttccagacaccagacagaccctcctgttctccgcc
actctgcccaaactcttggtggagttcgccagagccgggctgacagagccggtgctgatt
cgcctggatgttgatacaaaactcagtgaccagattaagctgtcgttcttccacctgcgt
gtggacgacaagccggcgctgctgctgcacctcctgaggaacgtggcgaagcctcaggag
cagacggtggtctttgctgccaccaagcatcacgtggagtacctgaacgagctgttgtct
tcagaaggcatcgagtgcgcctacatctacagcgccctcgaccagactgccaggaagatc
aacatcgggaagtttgtgcaccggaaagccatggtgcttatcgtcactgatgtagcagct
cgcggtatagacatccccctgctggacaatgtcatcaattacaactttccctccaaagca
aaactcttcttgcacagagtcggccgcgtgggacgtgcgggacgcagtggtacagcgtac
agcatggtctgtccagatgaaatgccgtacgtctacgatcttcacctgttcctcggaagg
ccggttcagttcgcgacagctgaccgcacacaggattcagacggtgtgtttggacgagtt
cctcagagcatcttggacgatgaaggctcccatctgatcacggctcatgaaaactcgctg
gacctgcagaacctgcatcgcgtctcggagaacgcctacaagcagtacctgaagtccaga
ccgaacccctcggcagagtcaatcaggcgggtgaaaagcaccgacgtgtccatcatggcc
gtccatccgttactcggttctggtttggagaaaaatgagctggagcgccttcagttggtc
gacgcaattaagagctacaagtccaaatcgactatttttgaaatcaactctaacagtaag
acgcctgcaagtgaagtgatgcggaagaaacggtcaaaggacaagcaggtggttgacaag
ttcaacaggcagagagaggacgtggcggcaggaagcaggctgcagctgtcggctccaccc
agggccactgctggtgaaaacgagggtcagggaaaaggaaacgaggaggaagacctgcag
ggggtgttctcagaggtgcttggctttaagagaaggaacttgcaggaagacggagaacac
ccaaagagcaagaaaagcagggaaacgggcaaagacgaggagtactacatcccttacaaa
ccgaaagacttcaactctgagagaggattaagcctcggtggagaaggcagtcattttgaa
cagcaggcctcctcagcggtcctcgacctcatgggagacgagggcgaccagttaaaccag
cacaaaaaaattatgagatgggaccgaaagaggaaacgttttgtgaaagagtcaggaaag
gaggagcaaaacaagaagatcagaactgagagcggacagattgtgcacaacaagaaacgg
aaaaacttctatgaggaatggaagaagaaatatagagtcgaggatgcgggacctggttcg
gatggagaaacgggtggaaggaagaggtctgcaggaggtatgaggcgtggtcgtggccgg
cgaggagccagctcccaccgccccgcggctccccaggtgacggctggcgggcgcaggatc
cgatccgagctgaaatccagctcgcagatcctgaagaaccgcaagctgaagcagaagcag
cagttcctgcagggcggcggcatgaagagaatccgcagcaaaaacaaacagtggctggga
gagatgaagaagtcgggcttcgggcgtggaggccagaagaagggcaaaatgaggaagagg
ctgtga
DBGET
integrated database retrieval system
