Poecilia mexicana (shortfin molly): 106924258
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Entry
106924258 CDS
T08022
Symbol
cstf3
Name
(RefSeq) cleavage stimulation factor subunit 3
KO
K14408
cleavage stimulation factor subunit 3
Organism
pmei
Poecilia mexicana (shortfin molly)
Pathway
pmei03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pmei00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
106924258 (cstf3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pmei03019
]
106924258 (cstf3)
Messenger RNA biogenesis [BR:
pmei03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
106924258 (cstf3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Suf
HAT_PRP39_N
HAT_PRP39_C
HAT_Syf1_CNRKL1_N
TPR_14
Motif
Other DBs
NCBI-GeneID:
106924258
NCBI-ProteinID:
XP_014853349
Ensembl:
ENSPMEG00000010320
UniProt:
A0A3B3X0C4
LinkDB
All DBs
Position
Unknown
AA seq
716 aa
AA seq
DB search
MSTEGTAEQAAAEYIPEKVKKAEKKLEENPYDLDAWSILIREAQNQPIDKARKTHERLVS
QFPSSGRFWKLFIEAEIKAKNYDKVEKLFQRCLMKVLHIDLWKCYLAYVRETKGKLPSYK
EKMAQAYDFALDKIGMEIMSYQIWVDYINFLKGVEAVGSYAENQRITAVRRVYQRGCVNP
MINIEQLWRDYSKYEEGINVHLAKKMIEDRSRDYMNARRVAKEYETVMKGLDRNAPSVPP
QNSPQEAQQVEMWKKYIQWEKSNPLRTEDQTLITKRVMFAYEQCLLVLGHHPDIWYEAAQ
YLEQSSKLLAEKGDMNNSKLFSDEAANIYERAIGTLLKKNMLLYFAFADYEESRMKYEKV
HSIYNKLLAIEDIDPTLVYIQYMKFARRAEGIKSGRSIFKKAREDLRTRHHVYVSAALME
YYCSKDKSVAFKIFELGLKKYGDIPEYILAYIDYLSHLNEDNNTRVLFERVLTSGSLSPE
KSGEIWARFLAFESNIGDLASILKVERRRFTAFKDEYEGKETALLVDRYKFMDLYPCSTS
ELKALGYKDVSRAKLAALLPEAVVAPSVPTLKDDPDRKPEYPKPDTNQMIPYQPRHLAPP
GLHPVPGGVFPVPPAAVVLMKLLPPPTCFTGPFVQVDELMETFRRCTLPESVDAAVELIT
GRQPEAAGEGNGPLENHATAKSLKRPNADSDEEDDKGAIAPPIHDIYRARQQKRIR
NT seq
2151 nt
NT seq
+upstream
nt +downstream
nt
atgtcgacggagggaacagccgagcaggcagcagcagagtatattcctgagaaggtgaag
aaagcagagaagaagttggaagaaaacccatatgaccttgacgcttggagcattctgatt
cgagaagcacagaatcaacccatagataaagcaaggaagacccatgagcgacttgtctca
cagttcccaagttctggcagattctggaaactgttcattgaagctgagataaaggctaaa
aactatgacaaggtagagaagttgttccagagatgcctaatgaaagtgttgcacattgac
ctgtggaaatgctaccttgcatatgttcgggagaccaaagggaagcttcccagctacaaa
gagaagatggcccaggcgtatgatttcgcccttgataaaattggcatggaaattatgtcc
tatcagatttgggtcgactacataaatttcctgaaaggagttgaggcagtgggctcatac
gcagaaaatcagagaatcactgcggttcggagagtctaccaaagaggttgcgtgaaccca
atgattaacattgaacagctctggagagattatagcaaatatgaagagggtatcaatgtg
catttggctaaaaagatgattgaagatcgcagcagggattacatgaatgcaaggagagtg
gcaaaggagtatgagacggtaatgaaagggcttgacagaaacgcaccttcagtcccacca
cagaactcccctcaggaggcccagcaagtggaaatgtggaaaaagtacattcagtgggaa
aaaagcaacccactccgtacagaagaccagaccctcatcacaaagagagtgatgtttgcc
tatgagcagtgcctgctggttctgggccaccatcccgacatttggtatgaggcagctcag
tacctggagcagtccagcaagctactggcagagaaaggagacatgaataattcaaagctg
ttcagcgacgaggcagctaacatctatgaacgtgccattgggactctcctcaaaaagaac
atgctcctctactttgcatttgctgattacgaagaaagtcgcatgaagtacgagaaagtg
cacagcatctacaacaaactgctggcgatcgaggacatcgaccccacgctggtctacatc
cagtacatgaagttcgccaggagggcggagggcatcaaatcaggtcgctccatcttcaaa
aaggctcgagaggacctacgcacacgtcaccacgtctacgtgtctgcagctctgatggaa
tactactgcagcaaagataaatcagtggcctttaagatttttgagctgggcttgaagaag
tatggagacattccagagtacatacttgcctacattgattacctctcccaccttaatgag
gacaacaacactagggttttgttcgaacgggtcctcacctctggaagtctatccccagag
aaatcaggtgagatctgggctcggttcttggcgttcgagagcaacatcggagacctggcc
agtattctgaaagtagagcgccgacgtttcacagccttcaaagacgagtatgaggggaaa
gaaacggctttgcttgtcgatagatacaagttcatggacctttatccctgctctaccagt
gaactcaaagcccttggttacaaggatgtgtctcgtgccaaactggcagcactgctccct
gaggctgtggtggctccctcagtgcctacactaaaggacgatcctgatcgtaaaccagag
tatcccaaaccagacaccaatcagatgatcccgtatcagccgcgtcacctcgctcctcca
ggtctacacccggtccctggtggagttttcccagtccctccagctgctgttgtcctgatg
aagctgctccctccgcctacgtgcttcactggtccctttgttcaagtggatgagctcatg
gaaacttttaggagatgtacacttcctgagagtgtcgatgctgctgtggagctcatcacc
ggcagacagcctgaggcggcaggggagggcaacggccccctggagaaccacgccaccgcc
aagtccctcaagaggccaaacgccgactccgacgaggaggacgacaagggagccatagct
ccgcccattcacgacatctaccgcgcgcgccagcagaagaggattcgataa
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